Array 1 43637-43140 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_SDGV01000031.1 Vagococcus silagei strain 2B-2 contig_31, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence               	Insertion/Deletion
==========	======	======	======	====================================	==============================	==================
     43636	    36	 100.0	    30	....................................	TTTCTAAGTTCTATCCACTCTTTTGAGACA	
     43570	    36	 100.0	    30	....................................	ATTAAAACACGTTTCAGAAGCATGTACAGT	
     43504	    36	 100.0	    30	....................................	AAAGGATTTTGAAAGAGTAAAAAAAGCGGT	
     43438	    36	 100.0	    30	....................................	CAATTTTATTAGCGATATCTTCGGAGAGCC	
     43372	    36	 100.0	    30	....................................	TACAGGTATTGGTATGATTACAAGCTCAGT	
     43306	    36	 100.0	    30	....................................	CTTCTGCATCTTCATATGCCGGAAGTGATA	
     43240	    36	 100.0	    29	....................................	TGAAGGTAACTACCTATAACGCTTTTATG 	
     43175	    36	  94.4	     0	..............T.............A.......	|                             	
==========	======	======	======	====================================	==============================	==================
         8	    36	  99.3	    30	GTTTTAGAGCTATGCTGATTTGAATGCTTCCAAAAC	                              	       

# Left flank :   TTAATTTGGAGTTACTAAGCCATGAGTTAGATTTAGAATCAGATGAAATAACTATTTTAGAGTTGTTTAAAGCATTGGGTATTAAAATTGAAACGCAAAGTGATACGATTTATGAAAAAATATATGAAATATTACAAATCTTCAAATATTTGTCTAGGAAAAAATTATTGGTATTTATCAATGTGTGTTCTTATTTTAGTATAGATGAATTTATTGAATTAAAGCATTATATTGCAATGGCGAATATTGATGTATTGTTTTTAGAACCACGTAAATTTTTTAATATTCAGCAATATGTAATTGATTCAAATTTTTATTTATCTCATTAAAATTTATTCTAACTATTAGCACGATTTCTTTTACAAATTTCTTAGCTCTTTGAAAATTTAATCGATTTAAATAAATTGAAGCATTCAGTCTGAAGTCTTGCTATGGACAAATAGTGCGATTACGAAACCTTGATTTAACGGCATTTCAAAAAAACGAAAATGGTCTACGAG
# Right flank :  TTATAGAACTCCGGAAACTGGGAAGTGTCAATTAAAAAAATGAAAGTTGTGTGGCTAAAGAATAAACTTTGTTTTTTTCATCAGTTCGAAAATCCTTCTAAATTTTATGTACAAGTTATAGTATAATTGTGTTATAGTGATTTTTAATATTATGTAGAGTAGTGGGGGATTAAGATGAAATATTTCATAGGTGTTGTTTTTATATTAATAATGATTGTTGTCATAAATAAAACGCAAGATCAATTAAAAAATAATCGTATTTTTCAAAAAAAAATACAGGATTTTCAATTAAAGCATAAATTGTCTGATGCAGATCTCAATCTGTTTAAAAAAACAATGGGCGAAGCTAAGGATCAGATTATTGAATGGGAAATATTAGTCAATCAATCAAAACGTATGAGGCAAATTCCGAAAGTTTTAACCGCGATTAAGTCTGCAAAGGCAATCTTTCGGAGATTAATGGATAATCCTAAAAATATGACTGAAATGAACGATTTTCT

# Questionable array : NO	 Score: 6.22
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTTAGAGCTATGCTGATTTGAATGCTTCCAAAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:63.89%AT]
# 	Reference repeat match prediction:         R [matched GTTTTAGAGCTATGCTGATTTGAATGCTTCCAAAAC with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [-0.80,-2.20] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [2-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [65.0-63.3]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0,5.28   Confidence: HIGH] 

# Array family : II-A/C [Matched known repeat from this family],   
//