Array 1 105886-104844 **** Predicted by CRISPRDetect 2.4 *** >NZ_ASWB01000003.1 Enterococcus moraviensis ATCC BAA-383 acOtp-supercont2.3, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ==================================== ================== 105885 33 100.0 35 ................................. TGGTTGCTCTCGGCAAACTTTAAAAAAGTTATAGA 105817 33 100.0 34 ................................. GGATGCAACAACAGCTGCTGCAGATGCCGCCGCC 105750 33 100.0 35 ................................. CCTAAAACAAGCGTTTCTGCAGAAGTTCCGTCATC 105682 33 100.0 34 ................................. TTGATACTGTTGATAATTGGATTCCGCTATGGAA 105615 33 100.0 35 ................................. TGTAATGTCGCATCGAGTCGCCTCAGATAAGCGAC 105547 33 100.0 34 ................................. ATCTTGATCCTCTTCTGATGGCGTCTCTAACCAA 105480 33 100.0 34 ................................. ACAGTCCATATAAAATCGTGGTCATTTGTAGTGA 105413 33 100.0 34 ................................. CTAAAACACGGTAGAGAATGATATCTTCAATAGA 105346 33 100.0 34 ................................. GTATAATCTATTTGGGCATTCATCAGTTTATTTC 105279 33 100.0 35 ................................. CAATCAGGAAACTAAAATACTCTATTCTGTCGCAT 105211 33 100.0 36 ................................. TCTAAATCAAGCTAACGAAAAAAGACAAGCAAAAAC 105142 33 100.0 33 ................................. GATAGTCCTTTATTATTAGAGTTAGATTTATTT 105076 33 100.0 33 ................................. AGTAATATCAATTGATAGATTACCATTTTTTGA 105010 33 100.0 34 ................................. GAATCAGTTAATAGGCAATTAAAAATGAATAAAA 104943 33 100.0 34 ................................. TGTCCATTCACGAGCTTTGAAATAGGACCATACA 104876 33 93.9 0 ...............T........A........ | ========== ====== ====== ====== ================================= ==================================== ================== 16 33 99.6 34 GTCTAGCTCTGTTTAGAGCTAGTGGATTGAAAT # Left flank : ATTACTAAAATTTTTGGATTAGGATAGTAGGTGAGACTAAGTGTTAGTTTTGATTACTTATGATGTAGCAACCAGTTCGGATAATGGAGTCCGTCGTTTGAGAAAAGTAGCAAAGAAGTGTCAAGATTATGGACAGCGAGTTCAGAATTCTGTTTTTGAATGTGTTGTTGATACTACAGAGTTAACTAAGCTAAAAAAAGAGTTGATTGATTTAATTGATGAAGATGTTGATAGTTTGCGTATTTATCGATTAGGAAATAATTATCAAAGTAAGATAGAGCATATTGGAGCGAAAGAAAGTTTTGATGTAGAAGCGCCATTGATATTTTAGAGAAATATTTAGTGCGAACCCCAAGCGCACACTAAATCACTAGGGGATTCGCACCAAACTTTGACTGATTTTTATCAATAATAAGGTGGTTTTCTCATTTGAATTTAATTTTTTGATAAATAGTTTGTGGAATAGTAAAAATATGTTATGTATTTTTATCAAATTCACA # Right flank : AGTGCGCCGTTTGTATTTTTATAAACTGTTGTTGGTCTACCTCTGCCATTTTATTCCTTTCTCTTCTCAATTGACTCTCTTCAAAAAAATGAAGAATTTTTCATTATGATTTGCTTGACCAAGCGAAAAATAGTAGGTACGCTATGTAAAAAGGCGGTGGACGAATGAATAAAGTAGTCATTTTATTAGTGGAAGATGAAGCGAGTTTAGCTAATTTTATTTCAGAGGAACTTAAATTTGAAGGATATGAAGTGCTTTATGCTCCTGATGGGGAGCGGGCGTTAGAATTATACAAACAAAACCAAGCGACTATTATCCTGATTTTATTGGATTGGATGTTACCCAAATATGATGGTATTACGGTTGCGAGAAGGATTCGCCGTAATAGTCAAGTTCCAATCATTATGATGACTGCTAGAGATCAGTTGGCGGATAAAGTGAGTGGACTGGATGCTGGAACCGATGATTATATCACGAAGCCGTTTGATATAGAGGAATTA # Questionable array : NO Score: 9.24 # Score Detail : 1:0, 2:3, 3:3, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTAGCTCTGTTTAGAGCTAGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.61%AT] # Reference repeat match prediction: R [matched GTCTAGCTCTGTTTAGAGCTAGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-5.70,-5.70] Score: 0/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [63.3-81.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9.68 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 297174-298294 **** Predicted by CRISPRDetect 2.4 *** >NZ_ASWB01000002.1 Enterococcus moraviensis ATCC BAA-383 acOtp-supercont2.2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ===================================== ================== 297174 33 100.0 35 ................................. TTTTTATTTATCACATGATGGGTCTATAGAAAATT 297242 33 100.0 37 ................................. CAAAAGAAGTTTTAAGAAATGAAATAGGTTCAATAAA 297312 33 100.0 34 ................................. CTTTTTTAAATAATGAATATTATTATTTGTATAC 297379 33 100.0 34 ................................. CGTGATGTATAAGTATTTAAGTTGTACCTTCTTG 297446 33 100.0 35 ................................. CTCTAAGCCAAAGCCTAGTGAAGTAAACTGAGAAG 297514 33 100.0 35 ................................. TACGTGCCTATAAAATGATGACTCCGACATATTCA 297582 33 100.0 35 ................................. CCCTATCTCGTTTGCTGGAATGTCTAACGCGTTAG 297650 33 100.0 34 ................................. AGGGTTTATCTTTGCCGATAAAGTCCCGCTCAAA 297717 33 100.0 35 ................................. AAGCCTTGCAGATTAAAAACTATGATGGACAGTCT 297785 33 100.0 35 ................................. ACGAAGCGCCTTGCAAGCATCGATAAATCCAGTTT 297853 33 100.0 35 ................................. ATTGTTTTCTACCTCCTGCAGTGCTTGCCATGGTC 297921 33 100.0 34 ................................. TCTTTGTTGTCTACAATCGCAATGTCGACTAAAA 297988 33 100.0 34 ................................. CCATCCTATGATTATGCTAAGGTGAATCGTTTAC 298055 33 100.0 34 ................................. TATGTCAGAAAGCTTTTTAGAATTTGAATCTTAT 298122 33 100.0 37 ................................. TCAATTTGACTTGGTGTAAATTTATAGTCATCCGGGT 298192 33 100.0 36 ................................. CTGTTATATTTAAATATGTTATAGTAAGTGGTAAAA 298261 32 78.8 0 ..........A......A.....-TT..TT... | AC [298283] ========== ====== ====== ====== ================================= ===================================== ================== 17 33 98.8 35 GTCTAGCTCTGTTTAGAGCTAGTGGATTGAAAT # Left flank : CCGTTTTGAATTTCTACAGAAAATGTTGATAAAAGATGATCAGCAACTATCACTTGATTTTGAAGAACCACTGCTAGTTGCAGAAGAAAACCCAGAAATTTTCGAAGATTACTCACAAGTTGTTTGGCAAAAGCGAACCTTAGGAGAAGTAACACATATTTTCAGTCATTTAAAATGGCATATTTTAGTTTTCTACGGGCGTCAAACAGGATTAACAGCTAAGAATGAAAACCAAGCTTGGGCAACAAAAGAAACATTTTCAAACTATGTTTTTCCAAAACCCCAGCAAAAGATGTTAGATCTGTACAAACAAGAATTTAGAAAAAAAGAATAATTTCTTGGTGCGAACCATAAGTGCACATAAAATTATTAGGAGATTCGCACCTGAATTTTGCTGAAAATAGCGGTAGAAATAGACTTTTTCTCATTTTAATTTAATGTTACACTAGTTTTAGTGGTGAAATAGTAGGGATATGACATGTATTCTGAACAATTTCACG # Right flank : TCACCTCAAGTTTAACCTCAAAAAAACTAAAATAATCCTTTATATTTCAAAAGATAATCCTGATTGCTGTGAGAAACCAAACTACTTAGTATGCAAAGCTGAAAATTATGATATAATTATAGTGATATCGGTGTAATGAACACCCAAACGAAGAGCAATCAGCTTTTAGAAGTGATTTTTCGTACTAGGGAAAGTTGGGGGACTATGGCAATTCCAAAAGAAGGTGAATTTGTAACGATCCAAAGTTACAAACACGATGGGCATTTGCATCGAACATGGCGAGATACGATGGTATTAAAAACAAGCGAGTATTCGTTGATTGGTGTCAACGACCATACTTTGGTAACAGAGTCTGATGGTCGTCGATGGGTTACTCGAGAACCAGCTATCGTTTATTTCCATAAGAAATACTGGTTCAACATAATAGCGATGATTAGAGAAAAGGGGGTTTCTTATTACTGCAATCTAGCGTCACCTTATCTTTTAGATGATGAAGCATT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTAGCTCTGTTTAGAGCTAGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.61%AT] # Reference repeat match prediction: F [matched GTCTAGCTCTGTTTAGAGCTAGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-5.70,-5.70] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [66.7-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 361870-363055 **** Predicted by CRISPRDetect 2.4 *** >NZ_ASWB01000002.1 Enterococcus moraviensis ATCC BAA-383 acOtp-supercont2.2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ==================================== ================== 361870 33 100.0 35 ................................. CAAAAGAAGTTTTAAGAAATGAAATAGGTTCAATA 361938 33 100.0 35 ................................. GATATAGATAAAATGACTTTATCAAGCAATATTTT 362006 33 100.0 35 ................................. TTTATTAGGTGCAGATATTTTTAAGGTTATACCGT 362074 33 100.0 36 ................................. CACACTAATAAAGAATCAAATAATCCTGAGGGGTGG 362143 33 100.0 35 ................................. CAATAATGCTACTAGTGGTCACTTTATCTCCTTGC 362211 33 100.0 34 ................................. AAAAATGGCAAGCAAGAAATGGTCGTTGAAAACC 362278 33 100.0 36 ................................. ATTCGTGATGATATTTTCAGGATATACTTTCCCCGC 362347 33 100.0 35 ................................. AGGCGAACCTGGAGTTACTGCAAAAATACGACTTC 362415 33 100.0 32 ................................. GAAATACACTTTAGCTATGATCAATTATTTAC 362480 33 100.0 34 ................................. CGATGGTATTCAATATGTTAAGAACTTAATGAAA 362547 33 100.0 36 ................................. AGATATTTCAACTTGTTGCTTATCAATAAACGCAGC 362616 33 100.0 34 ................................. TAAAATACTTAGATTTTGATCCATTGTTTTTCCT 362683 33 100.0 35 ................................. TGTTAAAGGGCATGCAAACTACGCTCCGCATGGGC 362751 33 100.0 36 ................................. TTTAACCCATCCGAAATTCCCGTTATCCAATTGTTG 362820 33 100.0 34 ................................. AAGGTGATGTTGACATTATAGGGAAACTGACTGT 362887 33 100.0 35 ................................. GGAGCATAATATTTAATTGTACACCTGTGCCTGAT 362955 33 100.0 35 ................................. CGGTTTAACTCTGGCGAACCTGGAGTTACTGCTAA 363023 33 84.8 0 .......................TTT..T.T.. | ========== ====== ====== ====== ================================= ==================================== ================== 18 33 99.2 35 GTCTCACTCTTTATTGAGTGAGTGGATTGAAAT # Left flank : AACGAGAAGAATCTGGCTTTGCAGTGATAATGACGAATGCTGATGCAGGCGAAAAAAAAATGACAATCAGTGCGATTCATGCAGGAAAAGTATTTGTTGATATATTAGGAAATAATGATGCAAGAGTAACGTTGGATGAAACGGGAGGCGGAACATTTCCTGTGAATGGTGGACAAATTTCTGTTTACGTAACGGAAGAAATTGTCGAAAAAGTGAACCGAGACATCAAACGCTCTGTTTTTGAGACAGATTAGGTGAGAAAGTTAAAAAATAAACGTGACTTCTATTAAAAGAATAATTATACTTAGGAGAGTGTTTAAGTGGTATAAACTACGTAAGCTAGGTGCGAACCCTAAGTGCACATAAAAACACTGAGAGACTCGCACCAATTTTTTGGTGAAATATGGAAGAAAATAACGTTTTTCTCATCTAATTCACATTTTTACCGGAAATTATGGTTGAAAAATGACAGATATGTAAACAGTTTGTCACTTTTCACA # Right flank : TACTCAATCCCCAAAAAATCAAAAATACAATGCAAAAAATCTATAATAAAACACTATTACTTGTTTTATCCATCGTCCTTAATATAGGATGATTTGTTTAGCATCATCTGAAAATCAAGCGATTAAAAACAAATGGAAGATAAAAGATACGTGGCAAAACAAAAGGAAATTTTGTTCTATAAAATTCCATCATTATTAAAGAATTTTCTTCCTATTTTTGGTATAATGTATAAGATTGAAAAAAGAGAGAGGACGTTGATGATGGCACAAGAAAACGCCTTGATCCAAGGTATGAACCCGAGACAAAAAGAAGCCGTTCTACATACAGAAGGGCCTTTATTAGTTATGGCGGGAGCGGGCAGCGGAAAGACGAGAGTTTTAACTCACCGCATAGCCTATTTAATTGAAGAAAAAGATGTGAATCCGTGGAATATTTTAGCAATCACATTTACGAATAAAGCTGCGAAAGAAATGAGAGAGCGTGTTGGTAAACTATTAGA # Questionable array : NO Score: 9.22 # Score Detail : 1:0, 2:3, 3:3, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCACTCTTTATTGAGTGAGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.64%AT] # Reference repeat match prediction: F [matched GTCTCACTCTTTATTGAGTGAGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.70,-2.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-76.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.78,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 3 555545-555960 **** Predicted by CRISPRDetect 2.4 *** >NZ_ASWB01000002.1 Enterococcus moraviensis ATCC BAA-383 acOtp-supercont2.2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================== ==================================== ================== 555545 34 100.0 34 .................................. CTAGTTGGTTTGGTCAAACGTTTTTTGGCTTAGA 555613 34 100.0 33 .................................. TAAGGTTCGTCAACTCCAAAGCTAATTCCGGAT 555680 34 100.0 33 .................................. TGATGATGACCTACCCTTTTAAGGAGAGAAAAC 555747 34 100.0 36 .................................. AAAACTTGTATTAAGTCTGAAAATCTGTGAATGGGT 555817 34 100.0 34 .................................. TAAATACCCATGTAATTCACGGCCACTTACTAAT 555885 34 100.0 7 .................................. CATGTAT Deletion [555926] 555926 34 73.5 0 ..........AAC...A......ACT..C...G. | C [555953] ========== ====== ====== ====== ================================== ==================================== ================== 7 34 96.2 30 GTCTCACTCTGTTATGGAGTGAGTGGATTGAAAT # Left flank : ATGGTGACGGTGGAGCAGATATTTTACCTTTATTCCGTTTGAACAAACGTCAAGGAAAAGCATTATTAAAGGAATTGGGTGCACCATCAGAGTTATATATGAAAGTCCCAACGGCAGATTTAGAAGATGATAAGCCTTTGGTAGCGGACGAAGTAGCTTTAGGTGTAACGTATGATGATATCGATGATTACTTAGAGGGAAAAAAGGTATCAGAGAAAGCAAAAAACACAATTGAAGGTTGGTATCAAAAAACACAACATAAACGACATATGCCAATTTCAATTTTTGATGATTTTTGGAAATAAGGGATAAAGATCTAAAAGATATTGTTAGTGCGAACCTCAAGTGCCCATAAAATTACTAGAGGATCCGCACCAATAATCGAAAGAAAAATGAGCTGATTTCGTTGTTTTTTCTCATTTTTTTTTAATGTTATGTAGATTTACGTGGAAAATTAGTTGTTGGAATCGATTATAAGAGATACTATCGACTTTTTCACG # Right flank : TACACACAAGTCCTTATGCAATGATAAGCCCATCCACTATTAAACCGAACTATATTTTACGATTCAAGCGAATATCATGAGATAAAAAGAAAGACTAAATACTTAGTCTTTCTTTTTTTACAGCGACTATTTTGATAAAACACCTTCATTTTGTTCAAATGGTTAAAAAAAGTGTAAAATTGAACTAGTTATCTGAAATGATTGATAAATTACTCTACAATTAATCTAACTATAGTAATTAAGAAGGTGAATGAAATCGTGAAAAAAGTGTTTAGGAAGAAAAGAGATATCGATAAAGAAGAATTTCTTTCATCAGAAAAAAAGGGTCAAGAAATAATGAATAGTGACATTCGAATTCCGAATAATATCAAAGGTTTATCTGATAGAGAAGTGCAACAACGGTATGCTGAAGGAAAATACAACAAAGAAGTTGAGGATCTATCTAGAACAACCAAACAGATCATCATGGATAACGCATTGACGTTATTCAACTTTATCAA # Questionable array : NO Score: 8.65 # Score Detail : 1:0, 2:3, 3:3, 4:0.81, 5:0, 6:0.25, 7:-0.41, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCACTCTGTTATGGAGTGAGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.82%AT] # Reference repeat match prediction: F [matched GTCTCACTCTGTTATGGAGTGAGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.70,-1.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.78,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //