Array 1 53238-53591 **** Predicted by CRISPRDetect 2.4 *** >NZ_UGPW01000001.1 Moraxella ovis strain NCTC11227, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================= ================== 53238 36 100.0 26 .................................... AGGTGTGCAAATTCTCACATCAAATT 53300 36 100.0 29 .................................... AATTTTAAGTTCTTGGCTTTTATTCTGGA 53365 36 100.0 28 .................................... CTTGTGGACCTTGTGCGAAGCGTAGGGC 53429 36 100.0 28 .................................... GTGTTATACGCTCTGTGACTCTCTGGTA 53493 36 100.0 26 .................................... CGCCGCCTCGCATGCTACTCTATGCT 53555 36 88.9 0 ..............................T.TA.G | C [53584] ========== ====== ====== ====== ==================================== ============================= ================== 6 36 98.1 28 GTCTAACGACCTTTTAAATTTCTACTGTTTGTAGAT # Left flank : TGGTTTTGATGTTGCCAAGTTTTGACATGCAAGCAAATGGAGGAGATATATGATAATCGTCAGTTATGATATCAGTGATAATAAGGTGCGTGGACGATTTGCCAAATTTTTAATGCAATATGGCGATAGATTGCAATATTCGGTGTATGAAATCCAAAACAGCGAACGCATTTTAAATATCATCATCGAAAAAATAAAAGCAGAATTTGAGCCTTTATTTACAGGGGCGGACAGTGTCATTATTTTTCGATTTACAGAACGTGAAGTATTAAGGTTTGGCCATGCCAAACATCGCAATGAGGATTTGTTGATTTTATAAAAAGCCTTGGAAAAAATGATGAGGTTTGTTATAGTAAGAGAGCTAAAGCACGCTCAAATATTTACTTTGCAAACCTCAGTCTTAATGCGTGATTTATCATGTTTTGTCGGTAAAAATGATTATTTTTTGTGCAAAAAACTTGCTAATCTCTCAAAAAATCATTAAAAATACCCCAAAACGG # Right flank : GGCATGAGAATTTAAATGGCTGCGAAGATCAAAAGGCATTATTTCATTAAAATCCCAAAATCACAGATTTATTTTTCTAGAACACTTGTATCTTACGAATTATGATTTATAATATTAATTTATACATATATTACTAGGATTTATAATCGTGAGTACTACGCTGCGCCAGTTGCGCGCTTTTGTGTTGGTAGCTGAGCAGAACAGCTTCACTAAGGCTGCTGAGACATTATGCCTGACGCAATCCGCCTTAAGCGGTCTGATCAAGGAGCTTGAGCAGAATTTAGACGTTAAGCTGTTCGATCGCACCACACGAAAATTGCACCTATCCGATGCGGGCATGCGCTTATTGCCGCAGGCGCGCCGTGTGCTCAATGAGATGTCCGTGCTTAATGAAAAGGTCTCCAACCTAAAGTCCTTGCACCAAGGACACATTCGTCTGGCGGTCTCACAGCAGCTATCCGCATCGACGATGCCTAAGTTCATCGCTAAGTTCTGTGAAC # Questionable array : NO Score: 3.06 # Score Detail : 1:0, 2:0, 3:0, 4:0.90, 5:0, 6:0.25, 7:-0.09, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTAACGACCTTTTAAATTTCTACTGTTTGTAGAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA // Array 2 903982-905962 **** Predicted by CRISPRDetect 2.4 *** >NZ_UGPW01000001.1 Moraxella ovis strain NCTC11227, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ================================== ================== 903982 32 100.0 34 ................................ GTATTTTTCTCTTAACTTCTGTTCTGCGTTGCGG 904048 32 100.0 33 ................................ ATAATATCCCTAATGGTTATCCAGTTTGTAAAA 904113 32 100.0 34 ................................ ATCTTCGTCAAAACCATCTAAATAATCACGCAAA 904179 32 100.0 34 ................................ GCGTCATGTAATATTTATTTATATTATATATATA 904245 32 100.0 33 ................................ TATCGCTTTGCTAAATTATTTTAAGCCGCTTAG 904310 32 100.0 34 ................................ GCGTCATGTAATATTTATTTTTATTTATATTATA 904376 32 100.0 33 ................................ GTCTATTTGCGCTTATTATAACGCTCGTCTTAC 904441 32 100.0 34 ................................ TTACCGTCCTGTCAATGACCGCCGATGCCAGTTA 904507 32 100.0 33 ................................ AACAGCCTACAGACTATTTTATAATTTTTTGGC 904572 32 100.0 24 ................................ AAGCCTGCTTATTTTATCCCCCCC Deletion [904628] 904628 32 100.0 33 ................................ GTGTCCAGTCATTATAGCCTCCTTATGGCTTGA 904693 32 100.0 33 ................................ TATTATTTTTTTATTTATTTTTTTATTTATTTT 904758 32 100.0 34 ................................ CTTGTAAAAACCCCTGTCAATCTCTCTCAATAGC 904824 32 100.0 34 ................................ AGCGGCGGCGATGAGCTGGGCTTTGGGGATTTTG 904890 32 100.0 34 ................................ GCCGACAATGACCCAAGTTGCCTGTCTGCGAACT 904956 32 100.0 33 ................................ ATAATATCCCTAATGGTTATCCAGTTTGTAAAA 905021 32 100.0 34 ................................ ATCTTCGTCAAAACCATCTAAATAATCACGCAAA 905087 32 100.0 34 ................................ GCGTCATGTAATATTTATTTATATTATATATATA 905153 32 100.0 33 ................................ TATCGCTTTGCTAAATTATTTTAAGCCGCTTAG 905218 32 100.0 34 ................................ GCGTCATGTAATATTTATTTTTATTTATATTATA 905284 32 100.0 33 ................................ GTCTATTTGCGCTTATTATAACGCTCGTCTTAC 905349 32 100.0 34 ................................ TTACCGTCCTGTCAATGACCGCCGATGCCAGTTA 905415 32 100.0 33 ................................ AACAGCCTACAGACTATTTTATAATTTTTTGGC 905480 32 100.0 26 ................................ AAGCCTGCTTATTTTATCCCCCCCCC Deletion [905538] 905538 32 100.0 33 ................................ GTGTCCAGTCATTATAGCCTCCTTATGGCTTGA 905603 32 100.0 33 ................................ TATTATTTTTTTATTTATTTTTTTATTTATTTT 905668 32 100.0 34 ................................ AAAAACCAACGCATCGCATACCGCGATGTAAAAA 905734 32 100.0 34 ................................ TATATAGTAGGCGCGTCGTGTCGTGTCGTGTCGT 905800 32 100.0 34 ................................ CAGTGACTGGATAGCCGTAGGGGTACATGGGATA 905866 32 100.0 33 ................................ GACAATCAAAGCTTGATGGGAGTGAGTGATATT 905931 32 96.9 0 ........................A....... | ========== ====== ====== ====== ================================ ================================== ================== 31 32 99.9 33 ATCGCACCCCATACGGGTGCGTGTGTTGAAAC # Left flank : GATGATGAGATATGTTAATGTTAATCAGTTATGATGTGGCGATGGATGACGGCGGGCAAAAGCGCCTAAGGCACATCGCCAAACATTGCCAAGATTATGGCGTGCGAGTGCAGTATTCGGTGTTTGAGTGCGACATCATGCCCGACCAATGGGTGGTATTAAAAGACAAGCTATTAAAGGCGTACGACCCTGACAAGGACAGTTTGCGGTTTTATCATTTGGGCAGTAAATGGCGTGGCAAAGTGGAACATCATGGGGCAAAAAAGAGTGTGGATTTGTTTCAAGATACGCTGATATTGTGATAAAAAAGAGGTAAATCGTGGCTCGCTAACGGGCAGTTCTCATCAAAATACAGGCAGGTTAGCGATGAGCTAAGTTTTTGAATTATTTAACAATTGAAAATAAAAACAAGTTCATTTATAATCAATGGCCTTTTTAAGGCTTAGGTTAGCGATTTTACCCATTCTAAGCCTTAAAGATATAGCCTTTAAACAAAGGCT # Right flank : CTCAATATCTTAATTTGATTCAAAAGTCCTATCGGGATTGGAATAGGCAAGGCAATAATTCACTTGATTTTTCTTCATCTTTTGTTTGATTTATTTTTCTATTTTACTGGATTATTTTCTAAGTTAATGCCTGTGCAATAAGAGGGGTTAAATCGTTGTATCTAAGTTTTTAATAATCACCATTATAAGAGCGGCAAACAAGTGATTTTATTTAGCTTAATTTAAGAAATGCTTTGTTGTTTTTTAAGTGTTTGCTTTAAGTTGATGGTCATATTGAAGTCGTATGCAAGGCATACTATAATGTGACCTCTTAAAACATATATTGATTGCAAGGTTAGATCATGATAAAAATCGGTCAAGGCATAGATGTTCACGCTTTTACGACAGGCGATTTTGTAACGCTTGGCGGTGTGCGTATTCCTCACACGCACGGCATTAAGGCTCACTCAGATGGCGATGTGTTGTTGCACGCTTTGGCGGATGCACTGCTCGGAGCGTTG # Questionable array : NO Score: 3.24 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:-0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATCGCACCCCATACGGGTGCGTGTGTTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [7,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-6.70,-5.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA //