Array 1 428658-426529 **** Predicted by CRISPRDetect 2.4 *** >NZ_LVVA01000001.1 Enterobacter genomosp. S strain GN06232 GCID_ENTE_00295_NODE_1.ctg_1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 428657 28 96.4 32 ..............G............. TGAACAACCATCAATCCATCTTACGGCATCAC 428597 28 96.4 32 ..............G............. GGATCGTCAGCGGCGCAGAACGCCACTAACAG 428537 28 96.4 32 ..............G............. GCTTACGTAACGGTAGGCCAGGCGCAGTTAGC 428477 28 96.4 32 ..............G............. ATTACCTTTTTATACTTTTTGTGCGCATAAAA 428417 28 96.4 32 ..............G............. ACCCGCAGCCAGTACCCTCTGGCGTCGTTCGG 428357 28 92.9 32 ..............G..........T.. GTAACGTCTAATGTATCGTTCGATAGCTTCCC 428297 28 96.4 32 ..............G............. TGGCAGAGTGGCGAACCCTTCCCAATCGTATT 428237 28 100.0 32 ............................ TGAAGCAGTGCAAAGAGCTTGGCAAAGAGCCA 428177 28 100.0 32 ............................ ACCGGCCTAAGCATACCGGAAGGGATGCAGAT 428117 28 100.0 32 ............................ TGGCTATTGTCGGTTGATGCGCTGGACGTGCT 428057 28 100.0 32 ............................ CGTAAATAAACCTAAAGGTGATAAATCCTTAT 427997 28 100.0 32 ............................ AGTTTCCGCGCCGGTGCCGACGACGTTGCTGA 427937 28 100.0 32 ............................ ATTTTGTTTCCTTAGCTGGTCGATAATGCGAA 427877 28 100.0 32 ............................ GAAGCACGGTTCGCGGTAGCCGGGGCGAAAAG 427817 28 100.0 32 ............................ TAATCCACGCCTGCACAACCTTGGCTTGATTA 427757 28 100.0 32 ............................ CTTCACTTTCTAAAAAAGTAGTAGCGAAACGT 427697 28 100.0 32 ............................ TAACATTCAGCTCAACATATGGAACGGTGACA 427637 28 100.0 32 ............................ TAAAATACCACTTCTAGCCTGAATATTATTAT 427577 28 100.0 32 ............................ AATCTACGCTGTCAGCAAAGGTGTAGAGATAG 427517 28 100.0 32 ............................ GCTGACCGGTTGGCGTTGTTACTCCGGCTTGT 427457 28 100.0 33 ............................ ACTGATTCGTCAGGAATTGTTCGTGTTTCGAAT 427396 28 100.0 32 ............................ ACCGGAAAAATGCTGCCAATGGGCGACATCCT 427336 28 100.0 32 ............................ CATGATAGGCGGCATAGATTCGCCGCTTTACA 427276 28 100.0 32 ............................ TCTCAGAAAGAGTAACCTTGCGTAAACTTCTT 427216 28 100.0 33 ............................ GCCGGGATGCAGAAGTCGACGAGATACGCGCCA 427155 28 100.0 32 ............................ GCGCCCCGGCGAAGTACGGGAACAAAAAAACG 427095 28 100.0 32 ............................ TTGACCCTAAGCAGCAAGACGGCGGCGACGCC 427035 28 100.0 31 ............................ CGCTGGAAAAGGATTTGCCGAACGAATACAC 426976 28 100.0 32 ............................ TGCCGCCGCGACGCAGCCGCAGACGTGGTTGA 426916 28 100.0 32 ............................ AGCTCAAGCTGTCCCAACATTTGCTTAATCTG 426856 28 100.0 32 ............................ GAGGAGTTTTTAGGCGTAAGCGGGTTACATCG 426796 28 96.4 32 ......................A..... ATGATTCACAGGCTGATCCGTTCGGTAAAACG 426736 28 96.4 32 .......T.................... ATTCTGCCATCATCATTTCCAGCTCGCGCAGC 426676 28 92.9 32 ....................TC...... TGAAGGGCCAGCGCAATGTTCTTCAGCCCCTC 426616 28 100.0 32 ............................ GTTATACGTAATGCGGATTTCAGAAAGCGTTC 426556 28 96.4 0 ..........C................. | ========== ====== ====== ====== ============================ ================================= ================== 36 28 98.7 32 GTGCACTGCCGTACAGGCAGCTTAGAAA # Left flank : ACGGGCTACGCGTTCGCTCTCATCCGGCGTCAGCGTCCTGCCTGCGCTTTTGCGGCGGGCCACGTTACGTTCGTTAATCCCGGTAACGCGCAAAATGTCCGCTTTCGACATGGCCGTCCATTCATGAATATTGTCGAGCACGCTGACGGGCAATCCCTGGTTGAGAAATTCTATCAGCCGCATACCTCTGTTCGCGGGTAAACCGGCGTAGCGCCAAAGTGCGTTATCAGCAGGTTTCTTGGCGGGGATCCAGGTTCTCATGTTACCTCCTGATTAATGTCATTTGTCATGGTTAAGTATAGCCATTTGTCAGATGGAGTGGAATGGGGATTTTTTGTGCTGGGTGGTTTGTGAGAAGAAGATGTTTTAACCCTAATTTTTAACGTTTGTGTAATTCATTGATTTTAAATAAGTGTTTTTGGTGGATAAAAAAGAGGGTCAGAGAAGGTTTTTTAGCTTTTTTTGTATGCAAATCAGAAGGGTGTGGAGATATTATTTCA # Right flank : AATCGTTCAAATAATCGACTGTCCTAACAAAAAAATAAGGCCGGGAATATCCCGACCTTTTAAATATTCATCTGCCATTACAGGCGAAAACAATTAGCGACTACGGAAGACAATGCGGCCTTTGCTCAGGTCGTACGGGGTCAGTTCAACAGTCACTTTGTCGCCCGTCAAAATGCGGATATAGTTTTTGCGCATTTTACCGGAGATGTGCGCAGTTACCACGTGACCGTTTTCCAGTTCTACGCGAAACATGGTATTAGGCAACGTATCAAGTACGGTACCCTGCATTTCAATATTGTCTTCTTTGGCCATCTAATCCTCTGGGGTATCACTACCAAGTTTTGAACCGGCAAGATAATGCCGAAATTCATCAATTAAGTAAAGAATTGCGCGTTTAAAACGCAGCAAAACAATTTCAGCGTATTGCCCAAGCGTCACGGTACAACCGAACGGAAAGCGCATTCGTAAAGGGGAGACGACAGGATAAACGTCAGGACGTT # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [61.7-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.65 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 439685-438575 **** Predicted by CRISPRDetect 2.4 *** >NZ_LVVA01000001.1 Enterobacter genomosp. S strain GN06232 GCID_ENTE_00295_NODE_1.ctg_1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 439684 28 100.0 32 ............................ TACATCACCGCCCCGAACGGAATCACCCCGGC 439624 28 100.0 33 ............................ GGTAGCGTCAGTGAAGGACAGCCCCAGCTTTTT 439563 28 100.0 32 ............................ GGTCTCAGGCGGGATGAGCAGCTCCGCCACGA 439503 28 100.0 32 ............................ GCTATAACCCGCCGTAATCTCTTTAGTGGCAT 439443 28 100.0 32 ............................ AGAATGGTGAAACCGTGGGATCGCTTTATTGC 439383 28 100.0 33 ............................ AGAACCTGCAAGTCCAGACGCTTGCTGACGCGA 439322 28 100.0 32 ............................ ATCGCCAGAGGCTTTACAGCGTTTGGCTACAG 439262 28 100.0 32 ............................ AGTGAGAATCACATAGCCGAACGCTGCCATTG 439202 28 100.0 32 ............................ ATGCACGAGAACGGCATCGATCGCAATACCGT 439142 28 100.0 32 ............................ TGAGTATGGGGGCGACGGTGTGGGACTGTCGT 439082 28 100.0 32 ............................ CGGCCGCGGGTCGCTTACGCGCTTATCTGCGG 439022 28 100.0 32 ............................ ACTCTATCCCGCTGGTTTGAATGTCGAAGGTG 438962 28 100.0 32 ............................ ACCTTACTCATTGGCACCAAGTCGGCATTTGG 438902 28 100.0 32 ............................ CATGAGCATGAGCATGAAGAAGGGGGCCATGA 438842 28 100.0 32 ............................ AAGCTGACCGGTTAGCTTGTCGCCACATGTTA 438782 28 100.0 32 ............................ ATTCGGTTAACAGCCGAACGCACAACCGCTGT 438722 28 100.0 32 ............................ TGCTCATGCAGCCGCCACCGGGTGGCCACGTT 438662 28 100.0 32 ............................ GATGCAGCGGACATTGCTACGCGCACTTGTCT 438602 28 92.9 0 .......................T.T.. | ========== ====== ====== ====== ============================ ================================= ================== 19 28 99.6 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : CTCCCACAAACGCAGGCTGTTTGCCGCTGTCTCGGAGCTTATCTGGAAGAGGTAAAATCCGGCCTCACAGAATCCATGCGTGATTTTCAGGTGGTGGAACTTGAGGACGAAGCGGAACAACCGCGACAAAAAGAGTGGCTACTGGAAGATACCGAAACGAAATGTGACTACTGCCGGGCGTTATACCACGTACTGCTGGTATCGCATTTTGATCGCGATATGCTGCCGCATCTTACAGGACTGCTCCATGACATCACGCATTCTATGGCCGCAGATGTTGTTGCGCCTCAACGTGCAGAAACGGTAGTTCACATTATTTCCTGAATGTAGTTTGTGGCGTCCGGGGTAGGCCCCTGACGCCACTGGCTTGACCCTTTTTTTTGAGGATAATGTAAGGTATTGATTTATATGATGCGAATTTACGTTTCAGAAAAAAGGGTTTCATGCGCGAAGATTGATTATTTTCTTTTCTAACAATAAGATGGCTTAGTTTCCTTTCA # Right flank : GCCCCTCTGGGCTTTAATGCCGTGGAAATGGCGTTACTGTCCCACAGACAGTACAAGTAAACCCATCCCTCACAGATATTCACCTCGCCTATTTAAAAACGAAATCCCATCATCCACATGCTTTCCATTTTTAGATTAAATAAAAATCCCATTCAGGGGTTAATTATATTTCTGTGTATATATTTTTTGTAAAAAAATACTTTTAAAAAGGATGTGTTTTTTGTTTGATTATCAAAGAAATTTCCATTCATTTGATATATATCACATTTGTATTTCTCTCATCTCGATAACATACCCGAATTCAATACCTTGAAATTAAAGCCGTTTCTATGCTTGCAAACAGCGTTACCCCAACAGATTTAAAAACCATCCTGCATTCAAAACGGGCCAACATTTATTACCTGGAGAAATGCCGCATCCAGGTAAATGGTGGACGCGTTGAATATGTCACCCAGGAAGGAAAAGAGTCGTTTTACTGGAATATTCCCATCGCGAATACC # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [48.3-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 3 456023-454672 **** Predicted by CRISPRDetect 2.4 *** >NZ_LVVA01000001.1 Enterobacter genomosp. S strain GN06232 GCID_ENTE_00295_NODE_1.ctg_1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 456022 28 100.0 32 ............................ ACAATATAAATTTGCACCGCAACATTGCTGGT 455962 28 100.0 33 ............................ CAGCACGCCGCCGCCAATCTTCGTAAACGCTGC 455901 28 100.0 32 ............................ GGATGCCACCCGGAACTCAGTGATGCTCTAAG 455841 28 100.0 32 ............................ GTCCACAAATCCCAGGGACTTACCTGTGATCG 455781 28 100.0 32 ............................ ATGCTGGCGCTGTTTATCACGCAGATCATCTA 455721 28 100.0 32 ............................ AATGAACAGGGGCTGGCTGGCGAGTTTTACAC 455661 28 100.0 32 ............................ ATAAGCAATGCGGAAATTGTTTGCGATGGTAC 455601 28 100.0 32 ............................ GGTATATCCACCGGCTTGCCGGCAAAGAGTGA 455541 28 100.0 32 ............................ ACAACCAGCGCCGCAATTGCCGCAATGACCAG 455481 28 100.0 32 ............................ TTAACGGAACATGGTATAACGCAGGAGTGGCG 455421 28 100.0 33 ............................ CACCAGCCGTGCGTTGTGAGTGTGCGCGTCCTG 455360 28 100.0 32 ............................ ACTGAAGCGGAGACCCAAAAGACTGTAGCTGA 455300 28 100.0 32 ............................ TTTGACTTCTGCTACTGATTTGCCGTTATTGA 455240 28 100.0 32 ............................ GCTCTGGCGAGGCCTTGAATTAAGCGTATTTC 455180 28 100.0 32 ............................ CATGTAGGTTGTTTGCGTATCACGCCTTCATA 455120 28 100.0 32 ............................ GCGAGGATAAAAGCGGTCCAGACCTGGTCAGC 455060 28 100.0 32 ............................ TTAGAGGGCTTGTTACAGAAAACAGCGCGGAA 455000 28 100.0 32 ............................ CTGAGCCACGCGGCCACCGGCACGAAAATCAA 454940 28 100.0 32 ............................ ACGAAAGCCAGCGACGGAACGCTTAAGGCTGC 454880 28 100.0 32 ............................ AAGCTGGAGCAGGACCAGGGCCGCAAGCTGAA 454820 28 100.0 32 ............................ ATCAAGCGTGAGCATAAACGCCGGAGCAATCT 454760 28 100.0 32 ............................ AAGTACACATCAATAGGTGTTATCAACACGCT 454700 28 89.3 0 .....................A.GC... | C [454674] ========== ====== ====== ====== ============================ ================================= ================== 23 28 99.5 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : TTCACGGTTTACATAAGCTGTTTGGTGGCGTGGGATTTATCAGCGGCATGCTGGTAGAGAAAGGGCTACCGGGATTTATTGCCTACGGCGTGTTGATTGGCGAAGTGGTGGCACCGATCCTGATTATTGTCGGGCTCTTTACGCGCCCGGCCGCGCTGGTGCTGGCGTTTACGATGATCGTGGCATGGCTGATGGTGGGAATGGGCGAAACGTTCGCGCTCGATAAGGTTGGGGCATGGGCGATTGAAAGCCTGGTTTACTTCTTTGTTGGCTCGCTGGCGGTGGCGTGTTTAGGGGCAGGGCGGTTTGCGTTAGGGAAAGCGCCTGCGTGGCAATAAAGCTGGGTACTGAAAATCTAAGGGTCTCTGGACCCTTTTTTATTGGTGGTTTTTAAGTGTTTGATTTTATTAAGCGGAATTATTTGTGATGAAAAAAGGGTTTAAGGGGTATTTTTTAGGGGAATTCTTTATCTGACAAGGTGATAGGTGTAGATTGTTCCA # Right flank : CGTAGGCCGGGTAAACGCAGTGCCACCCGGCAAAAAAGCCCGGTGGCGCTAGCGCTTACCGGGCCTACGAGCGAACGTTTATCGCTTATGCGAGCACCATATCCCCCTGCGGGTGACACGAACACGCCAGCACGTAACCCTCGGCAATTTCTGCGTCGGTCAGCGTCATGGTGCTGGTGACGGTGTACTCACCGGAAACCACTTTGGTCTTGCAGCATCCGCATACCCCAGCGCGACAGGCTGCCGCTACCGGCACGTTGTTGCTTTCCAGCGCTTCAAGCAGCGTGGTGCCCACGCGGCCAAAGAAGGTCTGCGCCGGTTGTAGCTTCGTGAACTTCATCCCGCTGGTCGCCGCTGCCGCCACGGGCGTGAAGAACTGCTCTTTGAAGAAGCGGGTCACGCCCAGCGCTTTCACTTCTTTCTCCACACTCTCCATGTACGGCGCCGGGCCACAGGTCATCACGGTACGGTTCGCAATGTCCGGCACGCTTTGCAGTAAT # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [35.0-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //