Array 1 84733-83386 **** Predicted by CRISPRDetect 2.4 *** >NZ_SMGG01000004.1 Seleniivibrio woodruffii strain DSM 24984 Ga0215702_102, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 84732 28 100.0 32 ............................ TTGAGCGTTGACGGCAGGAACGTGCTGGCCAT 84672 28 100.0 32 ............................ ATTTTGCAGGAGCGCATAAACGATAAGTTCAA 84612 28 100.0 32 ............................ TACGAGACGCGCAAAAAAATGCACCTCGAAAG 84552 28 100.0 32 ............................ CTAAGTGCGGCACTGAGTTTGAAGACCATAAC 84492 28 100.0 32 ............................ TGTGCTGGAATATATCGGCGATGGTCTGGATA 84432 28 100.0 32 ............................ TCAGTTTCTACCTCAAATGCAAGTTCATTATA 84372 28 100.0 32 ............................ TCAGTTTCTACCTCAAATGCAAGTTCATTATA 84312 28 100.0 32 ............................ AGAAACGGCAGTTGAGACTGCTGTTTCTTCAG 84252 28 100.0 32 ............................ GAATACTGAAGCCCCGTACTGTATAGCCGAGA 84192 28 100.0 32 ............................ TATCAGCATCAGCACCGTAAAAATAGTTTTAA 84132 28 100.0 32 ............................ TTGATTTATGTGGTGGAAGCGAGGGGGCTTGA 84072 28 100.0 32 ............................ TCATTGAGAAATCCATGAGCAAAACCTTTATC 84012 28 100.0 32 ............................ TGACTGTTGTCTGATACCATTCGTCAAACTCT 83952 28 100.0 32 ............................ GCAACCTCCCTGCCATTCATCAGTCGCTTAAC 83892 28 100.0 32 ............................ GCTTTGGATTCCCTCGGATATGGCATGACGAT 83832 28 100.0 32 ............................ TCACCCAGATATCGCCCATGCCTACTGAGTTT 83772 28 100.0 32 ............................ TCATAGCCGCCGCCCACTTCATCAAGCAACCG 83712 28 100.0 32 ............................ CCAAGTGCGAATATCTCTACTGCGGGCTTTGT 83652 28 100.0 32 ............................ TTCGCAGGGGCTGTTATTCCCTTGGCCATAGT 83592 28 100.0 32 ............................ TGCCTGTTTGCGGTTAATGAGAGGGATGCCTG 83532 28 100.0 32 ............................ GATTTCGCCGTTTTCGTTTAGTCTTTTAATAA 83472 28 100.0 32 ............................ GCCATGTCTTTTCGCCTTTGTATTCCCAGCCG 83412 27 82.1 0 ...................A.GC.-..C | ========== ====== ====== ====== ============================ ================================ ================== 23 28 99.2 32 GTTCACTGCCGCATAGGCAGCTTAGAAA # Left flank : ACAGCATTGGAAAATATAGATAATATTTTTTGAAATAAGTTGCTTGACAAGAGCTTAATAAAACTGTATAAACCCCCTTACCGCTGGTTACAGTGGTGAGAGCCGAGGTGGTGGAATTGGTAGACACGCAGGTTTCAGGTACCTGTGGGAGTTAATCCTGTGGGGGTTCGAGTCCCCCCCTCGGCATACAAAAAGACCCATGTCTTATGACATGGGTCTTTTTGTATTTCGGGGACTCGAACGGCTTTTGCCGCCGACGAGCAGGAGGAAAAGCGCACAGGGATGTGTGCGTCAGGCGAAGGACTGGCCTTTTTGGCTGACTGCACGATGCGGGCAGACAAAAAGCGAGTCCCCCCGAAAGCATCTTTTGAACCCTATTTTTCCTATCTGATTTTTATCCATATTTCAGAGATACTTACAGAAGAGCAAAATAAAAGGGTTTTTACAGCTCAAAAAAGTTTTCTTCCATTGTCAGCGTGACTTCTGTTAAAATTAATCTG # Right flank : CGTCACTCTGAAAACTAGCTGAAGGCTGTATGAGTCCACCTTAAGCTAATTGCCAAATAGAGCACAGAGTCTCATCAAAATCACTTTCCATATCTGCTCCCCATTTTTAAATCATCTTTCACCTAAAAAAATATTTCACAGACGACAGCAACTGACGCTTATGCACGATATAAAGATCAGTAATCCATATGAAAACATGGTAAGGTTTCTGAGGAGGAGATATGGACTACTTCAAGCCGTCAGAGATGAAAACCATAATGCACTCAAAGCGTGCAAACATGTATTATCTGGAATACTGCCGGATTCTGGTCAACGGCGGCAGAGTGGAATTTGCGGCGGAAGCCGGAAGAAAAATCAACTACTACAACATACCGATTGCGAACACAACCGTAATCCTCCTCGGCAACGGAACATCAATAACTCAGGCCGCAGTGCGTGACCTTGCGAAAGCCGGAGTGCTAATCGGTTTTTGCGGCGGCGGCGGAGTCCCGCTTTTCAGC # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCATAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGCATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [56.7-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 132479-131909 **** Predicted by CRISPRDetect 2.4 *** >NZ_SMGG01000004.1 Seleniivibrio woodruffii strain DSM 24984 Ga0215702_102, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 132478 28 100.0 32 ............................ TCTGCTATTCATATGCGGAAGCGGTAGCAAAA 132418 28 100.0 34 ............................ TCGCATTTTCATCAGCACCGATGGGCGCAAGGGA 132356 28 100.0 32 ............................ TGAAGGATCCGGATCCGGGCAGTACGCACAAT 132296 28 100.0 32 ............................ TTCGGGGTTTAACTAAGGGAGGGTTGGTCGGG 132236 28 100.0 32 ............................ ATGTACAGTTAAGGCATCGCCAAATATGTGCA 132176 28 100.0 32 ............................ TGAACAGATTGATACGCTTATCAGCATAGCCG 132116 28 100.0 32 ............................ TGAAGGCTGGTTCCCGAACCATGCGGACGAGT 132056 28 100.0 32 ............................ TCCGTTTATCTGGTCAGCTTCTCAAAGCTGAT 131996 28 96.4 32 ....................T....... TGTGTCGGTGCGAAACTGCGCCCGAAGGCGTA 131936 28 82.1 0 .............T..T....G.TT... | ========== ====== ====== ====== ============================ ================================== ================== 10 28 97.8 32 GTTCACTGCCGCACAGGCAGCTTAGAAA # Left flank : GCTCAGCCAGAGAACCGTTCACCAGATTGTTCACAGTTCTGCTCACCGTGCTGTTCTCCAGATTCAGCGACTGCGCCAGTGAACCCAGCGAAATGTTATTTCTCCTGCCAAGCTCCACCACCGCATGACACTGAGCCATGGAAAGCCCGCAGCAGTCTGTTATCCTGTCTTCCAGAACACCCAGCCTGCGCTCAAGCTCTATAATAAGATCCCTCAAAACCCGTGACTTTGTATTTTTACTCATATTCAGCTCCATGATTAACTATTGTATATTACAACTATTGCAACACGCAAGCGAAATGATAAAAATATATTGATATTTTTCGATGTGACATATAGATCAAAACCATCAAAAAACAACCCTATTTCTGGCCATAATTTTAAACCTATTTATTTTCTCTTTATTCACAGACACTTTCATAAGGCCAATAAAAAAGGGTTTTTATTGTGAAAAACAATATTTATTTTATTACTCAACAGTGTCTGATAGAATATTTCTA # Right flank : CTCATAGATATGTTCTACGATAAAAATCCCCCCGTACACAGCCGAAGCCATGCAGAGGGGACTATATTCATTATTTACTCTTCAATATGTCTCTTATCTCGGTAAGGAGCACTTCCTCCTTGGTAGGAGCGGGAGGTGCGGCAGGAGCTTCCTCCTCTTTCTTCTTCATGCTGTTGATACCCTTAATGAGCATAAACACTGCAAAGGCCACGATTGAAAAATCCACAACGGACTGGATGAAGCTTCCATAGTTAAGGGTGACCGCCGCTTTATCCCCTGAGGCCTCTTTAAGAGTGATTGCAAGGTCTGCAAAATTGACGTTGCCTAGGATAAGTCCGATAGGCGGCATAATTACGTCCGCAACAAGACTGGAAACTATTTTGCCGAAAGCACCGCCGATGATTATACCCACGGCCAGATCGACCACGTTACCACGCATTGCAAATTTTTTGAATTCCTGAATTATAGACATGCAGCAACTCCTGTTTGATAGATATTTA # Questionable array : NO Score: 6.15 # Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [51.7-80.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 1249043-1247694 **** Predicted by CRISPRDetect 2.4 *** >NZ_SMGG01000003.1 Seleniivibrio woodruffii strain DSM 24984 Ga0215702_101, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 1249042 28 100.0 32 ............................ TTCAAAAAGTCTGCGAAGAGGAAGGGCTTGCG 1248982 28 100.0 32 ............................ AACCGGAATGATTTCTGCGTTTATCTCCATGT 1248922 28 100.0 32 ............................ ACAAGTAAATCAGTTTCTTAGAAAGTTCAGTG 1248862 28 100.0 32 ............................ TGATGCTATGAGAAGATTGTCAGGTGTGTAAG 1248802 28 100.0 32 ............................ ATTGTGATGCCGAGCGAAGCAACACCGATACC 1248742 28 100.0 32 ............................ TTCAGCACCATAGCCTTCAGCCACTCATCAGA 1248682 28 100.0 32 ............................ ATCCGGATATACATACGATTCAGCAAATAATG 1248622 28 100.0 32 ............................ ATATGTTCCTACTGCTCCTTCAGATACTCTTC 1248562 28 100.0 32 ............................ TCTTGCGGGTCGCTTGCCCGCAGAGAATAGCG 1248502 28 100.0 32 ............................ TGCGCCGGTTCTCATGTCTTTAACAACCTCAT 1248442 28 100.0 32 ............................ TATCATTATCCATGCCAAACACATACAATGTA 1248382 28 100.0 32 ............................ ATCAGGAAAATGAGTTTGCCTGACATTCTCTC 1248322 28 100.0 32 ............................ TATTGACGGCGGCGAGGTCATCCCCGAACCTG 1248262 28 100.0 32 ............................ TTTAAACTATTTTTGCGGCGTTGTCGCCGTTT 1248202 28 100.0 32 ............................ ACCGAATGAGCGGAACAGAGAGGGCTATGCCT 1248142 28 100.0 32 ............................ ATCTTTATGAGTGCGGAGTGTGCCAACGGTTA 1248082 28 100.0 32 ............................ AGAACTTCGTTTTCTCTTACTCAACTGTTTGC 1248022 28 100.0 32 ............................ AGCTGGGGCGTTTGACCCAATCTCAGTAGGCT 1247962 28 96.4 32 ..............G............. ACCGAGGGAGTTTATGAAATTCCTGCTGTAAC 1247902 28 100.0 32 ............................ GAGAGTCACGACGAACGGCGGGCATGCGAACC 1247842 28 100.0 32 ............................ CGCAGTAAAGTTCTGTCGAACTGACCGCAGGA 1247782 28 100.0 32 ............................ TCCGTGGTTTTTTGCGCATTTAAGTTCAACAT 1247722 28 85.7 0 .............T...T...A.....T | A [1247697] ========== ====== ====== ====== ============================ ================================ ================== 23 28 99.2 32 GTTCACTGCCGCACAGGCAGCTTAGAAA # Left flank : GCAGTTAAAGAAGTTAAAACAGAAAAAGCAACAGATGCGACACAACCTGAAAAGGCTGCCGAACAGCCCGCTCAACCTGTTAAAGCAGCCAACTAACACGCCAATGGCAGAGGTCTGCTTCAGACCTCTGCCCTCCCTATCAGCTCTGCTCCCTTTCATTCATAGCAAAATATTCAGAATAGTGTTAAACTTCGGAATAAAAAATTCGTCGGAGGACAAAAATGGCAACGAAAACAGGCGAAAAATATGTTTGCAAGGTCTGCAATGCGGTTGTTAAGGTTGAAAACGGCGGCAGCGGTGCGCTTATGTGCTGTATGGTCAAAATGACAAAAATGTAATTAAACCCGACTATTCTTTGATCCGTTTATTTGACCCTATTTTTTTGTTAATATTTTTCTATCTATTTTACAAACATTTATAATCGGCCTGAAAATTTAGGTTTTTCACTTATAAAAGCTAATAATCTTTGTGTATAATGTTATTAAGCAACTTTGCCTCTA # Right flank : ATCTCTGATCAGGTAAAACAAATCCACCCCAGCCCTCATTTATTAAAGGAGGCTGATATCCTGTTATCCGAAAAGATACAGAAGAAGCACGCCGAAGATGATGCGGTAGACCCCGAAACCGATGAAGGTGTGGCTTCTGACGAATTTTATGAAAAATCGTATTGAGGCATAAGCCGAAATAAAAGCTATCACAAATCCCAGTCCGAGGTATGAGAACCCAACGGCTTTCAGCTCATGGAAGTTTTTCAGCAGGTCGAAACCTGCGGCGGCGGTCATTACGGGAAGCGCCATGAGGAATGAAAGCTCTGTGCTGGCTTTTCTGCCTGCTCCGGAAAACATAGCACCCAGAATAACAACACCGGCTCTGCTCGTTCCGGGAATCAGAGCCAGAATCTGCGAAAGCCCTGCTATCAGAATATTTCTGAATCCCAACTGCTCAATGGAATGGACTTTAACGGTCATTCTCCTATAGATAAGCTCTGCTATGATAAAAAGTACCC # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [58.3-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //