Array 1 70944-65256 **** Predicted by CRISPRDetect 2.4 *** >NZ_QKVH01000018.1 Acinetobacter baumannii strain WE2714 21-WE2714_1_(paired)_trimmed_(paired)_contig_19, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================================== ================== 70943 29 96.6 31 ............................T ATGCATGTTCTTCAAGGCGGCAAGTTGTCTT 70883 29 96.6 31 ............................C TCGATGTCAGCAAAGATCTGACGTTCAGGAA 70823 29 96.6 31 ............................T GGACTAATTTCTTAGTTACTGACCAACCTTC 70763 29 96.6 31 ............................C CGTCATAAAACGTTGTAGCACCCTGGACTAA 70703 29 100.0 31 ............................. ACAACCACAACAGCAGCAAGTTATGCAGCAA 70643 29 100.0 31 ............................. GTGGTTGCAAGAGCATCAAGAGTGGCTGCGT 70583 29 100.0 31 ............................. ACCTTCCGCCCCGACAGTAGTCGCATTTGCT 70523 29 96.6 31 ............................T GCTCCGCCTTTACTTTGTTCAACGAATTGTA 70463 29 96.6 31 ............................T GAATTCTCTAAATCACTGAAATGCTTATAAT 70403 29 100.0 31 ............................. TCGTAAAAAGTAGTCGCACCTTGCACTAAAC 70343 29 96.6 31 ............................G TTGCCCGGATCTCTTACAAGTGTTGAAGTTG 70283 29 100.0 31 ............................. ATTTACTTATGTAATGTTCGGGGACTTAAAC 70223 29 100.0 31 ............................. CCACCGCCAATAGGCTTATTATTGATAGCAT 70163 29 96.6 31 ............................T GCACCTTAGTTGTTGGGGGAAATCCTGCTTA 70103 29 100.0 31 ............................. ATTATGAATTTCTTCCCTTTGACTACAAAAT 70043 29 96.6 31 ............................G TACAACAACCTGTACAGCAAGCAGTTCAGCA 69983 29 96.6 32 ............................C AGCCGAGGCTGCAATGATCTTTGATTGGGATT 69922 29 100.0 31 ............................. ATAAGCCTTTGATTCTATTGCGTTTTCTTAG 69862 29 100.0 31 ............................. GTACCACTCGTTGGAATTGATTGGGAATTAT 69802 29 96.6 31 ............................G TTATCTATGGGTGGTCAAAGCCTAGATATTA 69742 29 100.0 31 ............................. ATAGCTGGTATAGATTCAAGTAAGCATAAAT 69682 29 100.0 31 ............................. GAAACCATCAATATTGTCCCATGAATCAGCT 69622 29 96.6 31 ............................T CAAATCTAAACCATGCTCGTTAGGCATTGGT 69562 29 96.6 31 ............................C GACTACAATCGATCCCACAACGGGCCAACCA 69502 29 100.0 31 ............................. GGCTGCACAAGTTGCTATTAACTTTCCTGGA 69442 29 96.6 31 ............................T AACTCAACACCACGAGAGGAAGAAAAATATT 69382 29 100.0 31 ............................. ATCGGTCTTGTAGGTGCTGCTTATCTACTTG 69322 29 96.6 31 ............................T GTGTTTTCTGGATGTATTAAGAAAGGTAAAA 69262 29 96.6 31 ............................T GAGCACCAGACAACTCCCCAGTAATTTCAGT 69202 29 96.6 31 ............................G ATTAAAGACCCACAGGGAAATCCGACTGGTG 69142 29 100.0 31 ............................. TGTTTCGCATTTTTATCTGAAGATATTCAAC 69082 29 96.6 31 ............................G ATCTGCGTGACCCAAGTAAACGTAATGAGCA 69022 29 96.6 31 ............................T CAATTGGAACGATATCAGGCTAATAACTACG 68962 29 96.6 31 ............................T CGCCACGTTTTTTAGGTTGTTTTATCGAAGC 68902 29 96.6 31 ............................T GATGATTGGCGCGAATGTGAAAATGGAAGTC 68842 29 100.0 31 ............................. GGAACAGATCACCGGCTTAACTCGAGATGTA 68782 29 96.6 31 ............................C CCAAAAATCGGCAAATTCGTTATTTACACTT 68722 29 100.0 31 ............................. TAACTACCTTCTGACTCTTCATCAACCCAAC 68662 29 100.0 31 ............................. ATCTGAAAATTGCATCTTATACCCCTTATTT 68602 29 96.6 31 ............................T GAATACAAAGCTAAGAGAGATCAGGAAACCT 68542 29 100.0 31 ............................. AAAATGGTAAAGAAAATTAGCATTTAAATAT 68482 29 96.6 31 ............................T GAACAAGTTGTTATTCCCCCAGAAGGTGAAA 68422 29 96.6 31 ............................T CCATAACCCAACCAATTGCTTCAATTAACTG 68362 29 96.6 31 ............................C ATCATTGCAGCCCCAAGAAGCTCAGGCGTTA 68302 29 96.6 31 ............................T CCATAACCCAACCAATTGCTTCAATTAACTG 68242 29 96.6 31 ............................T TCATGAAAGAACTTAAAAGCCATACTTGTGT 68182 29 96.6 31 ............................C TTCAATGTGTTTAAGATCGGGTCAAAAGCTA 68122 29 100.0 31 ............................. GCCTGATCCCGCTTCACCATACATTGCACGC 68062 29 96.6 31 ............................G TTATGTGGCATATACGCAACAAGGTACGATT 68002 29 100.0 31 ............................. AAAATGGTAAAGAAAATTAGCATTTAAATAT 67942 29 96.6 31 ............................C AATACAAACATTTGACTGCACATCTGGAACA 67882 29 96.6 31 ............................T AGAAAGCTTGGAAAACAAAGGTGACTGTAAT 67822 29 96.6 31 ............................C CGCACAAGATTACATAGACAAAGTGCTCGAT 67762 29 100.0 31 ............................. GAAACATCTGTTATTTTTATTGATGAGGTAC 67702 29 100.0 31 ............................. CCCTTTGGATTGAAGACTCTGCTTTTGCTGC 67642 29 100.0 31 ............................. TTCACCAGCCTCGGCTAGACTTGATGCTCCT 67582 29 100.0 31 ............................. AGCAAAATTCAAAAGAATTACCCCAGCCAAG 67522 29 96.6 31 ............................T TGGTGTGCCTGCGCCCACTCAAGCCATGATT 67462 29 96.6 31 ............................T TTAACCGAGATCAAGAAGTAATTGCTTGGGC 67402 29 96.6 31 ............................T ACAATACGACGTGATAATGCAACTAAAGCCC 67342 29 100.0 31 ............................. CGGTAAAATTAAGTTACCTGCTAAACTTGTG 67282 29 100.0 31 ............................. ATCAAAGCCTTAATCGCTAAATCAACTGCTA 67222 29 96.6 31 ............................T TTTGTTTATACGGTTAATAAATCAGTACAAT 67162 29 100.0 31 ............................. TTACACAGGCATGGCAATGAAAGTGTTCTTT 67102 29 96.6 31 ............................C CTCGTGGAAAAACTTAAAAGCCATCTTCGTA 67042 29 96.6 31 ............................T TCATCTAAATGTTTTTGACGTTCAGCTTCAG 66982 29 96.6 31 ............................T AGACAGCTCATTTAATCCGGGTGAGAAACAG 66922 29 96.6 31 ............................T AGATAATGTTGAATGGGTTGAAACTACCTAC 66862 29 100.0 31 ............................. GTTCAGCATTCCCCTTCGGGGTCAACGTCCA 66802 29 100.0 31 ............................. TTACCCCTCCTTACTTTCTGCTTTAACTTCT 66742 29 100.0 31 ............................. AAACACCAAGCCATAAAATTAATTACAGCAA 66682 29 96.6 31 ............................T GTTTTGCTAATTTATCAATATCGATTTTCAC 66622 29 93.1 31 ...AC........................ CAGGGGTCAAGTTCAGAAGATTTACGTTACA 66562 29 82.8 31 ...GC.......CC..............G GTATTAGTGCGAATTGGCTTTTAGCCCACGC 66502 29 89.7 31 ....C.......G...............T TAAATGCTCAACTATTTCTGTAGCTAATGGA 66442 28 82.8 31 ...GC....T...-..............T TCAAATGATTTAATGAGCTTGTAGCCATTTT 66383 29 89.7 31 ...GC.......T................ CGTCTTCTAATGATGGACTTTAATCCAATAT 66323 29 82.8 31 A..GA.......TC............... TCTCACTGAAGATATGACCATCACTTTCTTC 66263 29 82.8 31 ..CGC.......CC............... AGCCATTTACTTTGATAAAGCGTCACATAGC 66203 29 96.6 31 ............................T AGGAAATTCTATCGGCCCAGCATCTACAAAT 66143 29 100.0 31 ............................. AGAGACACATCGTTAATAATCTCTTGTGCGG 66083 29 100.0 31 ............................. TGAGCAAATTATCAATTGATCTATCTGCAAG 66023 29 89.7 31 ............CC..............T AGACGGTGTTACCTGTAGGCGGTGTCTACTG 65963 29 89.7 31 ...TC.......C................ TCGTTTGAATAATATGGACAATCCAGCCAAT 65903 29 86.2 31 ....G.......TC..............G CAGCATCAAACGAGATATTGGCTAACATATT 65843 29 79.3 31 ...G......A.CC...........C..C AAATAGTTTTAGCTATCTGAGCATTTAATTT 65783 29 89.7 31 ....G.......C...............T TCATCACGTAGCCTTTTACACGCATCTTGCG 65723 29 93.1 50 ....................C.......T GTACGCTGAGTATTGATATTGACATTCAGGGCATTCAGAATTTGGCGCTC 65644 29 89.7 30 ....G........C..............C CAGTTTGCTGAAAATCACCAATACGGTCTT G [65619] 65584 29 79.3 31 ...TC......TCC..............G ATTCTATGAGCGTGACCATGACTCTATTTAA 65524 29 89.7 31 ...GC.......C................ TTATCCAGATAAAACCATATCTACAAAGTGG 65464 29 93.1 31 ....G.......................G ATCATCTACAGTGATTGAATAAACGGTTTTT 65404 29 82.8 31 ...GC......TG...............C AACGACGACGCCGTGTGTTTGTTATCGGAAG 65344 29 79.3 31 ...GC....T..TC..............C AAGTAGGATTTGCAGCCCCAATAGTCTTTAT 65284 29 75.9 0 ....G....T...C.A........AT..T | ========== ====== ====== ====== ============================= ================================================== ================== 95 29 95.5 31 GTTCTTCATCGCATAGATGATTTAGAAAA # Left flank : ACGTTGGGCTAAAACGTTATACAAACAACTTGCTAAAGGCTTTGGAGTTGAATTTATTCGTGATGAAGGAAAAAACTCTCAAGACTCTATTGCGGATATAGCCAACAGCTACCTTGATCATGGAAACTATATTGCCTATGGCTATGCAGCAGTTGCTTTAAATGGAATGGGAATTAGTTTTGCCCTCCCTATTTTGCACGGTAAAACACGTCGTGGAGGTCTAGTCTTTGACCTAGCGGACCTAGTTAAAGATGCTTTTGTTATGCCAGTCGCTTTTACATGTGCAGCAAAAGGATTAAATCAAAAAGAATTCCGAATGCAGCTTATTGAAACATGCCAAGACCAAGATATTTTAGATTACATGTTTAGCTTCATTACTGACATATGTAGTAAAATCAAATAAAATCATACATTTAACCCAAATACCTTATAACGAAGTATTTTCACTCATTAAAAACTTATATAATTGATTTTAAGAGTTTTGTTTTAACTTAACTCTA # Right flank : TTGAATCTTAAAAAGAAAAAACCCCGAAACTTACGTTTCAGGGCTTTTTCGAATCTTGGTGGGATGGCGTCTACCAAACCAAAGACATAACCTATTATTTTTTATATAGTTTCATAAAATAAAAAAATTAAGGATACACACTAGGATACATATTGTATTCCCTTACTACAATTAACATCTGATAGAATTATTCTAATTTCTCAAGCAATCCATTCACAGGATTATATACAATGTTCTGAATATCCTCATTTTTAATCTTTTCTACTATTTCATCTATAATATTTATTGGGACCAAAAACCACTCTTGTGGTTTGACAGGATTTCCAAATCTATCTGTGATAACAATATCAAGTTGTACTGATTGTAAAACTCTATGAATAATCTTTTCTAACTTCTGGGGTACAATATTTTCAGGAAGCGAATACGTTGCGACAATCTCAACATCAGCAAGCAAATAGGTAGGGTCTTTTCTAGCTTCTGTAATACGCTTATTTACGTTA # Questionable array : NO Score: 5.47 # Score Detail : 1:0, 2:3, 3:0, 4:0.78, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.43, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCTTCATCGCATAGATGATTTAGAAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.86%AT] # Reference repeat match prediction: R [matched GTTCTTCATCGCATAGATGATTTAGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-3.80,-4.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [77-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [65.0-81.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //