Array 1 167273-162987 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADPBV010000005.1 Bifidobacterium longum strain 1001283B150225_161107_D10 NODE_5_length_199180_cov_70.0096, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ====================================== ================== 167272 36 100.0 35 .................................... CTAGTGGACGATGACGAACCCGAAGAAGAGGAGGA 167201 36 100.0 36 .................................... TCCAGCATGGGCCTGTTAGGTTGGTTTGCGATCATC 167129 36 100.0 35 .................................... ACTCAAAACGCTTGGCTTCAACCCCGTCGATTGCG 167058 36 100.0 36 .................................... GTTGTTGTTGGAGAGGTGTTGATTATGAAGTGCATT 166986 36 100.0 37 .................................... TTGACAAGATGGCGAAGATCACGCGCAGCGGCGACGC 166913 36 100.0 37 .................................... TGGTAGATGGTAGAACGGTGTTTCTGTTGCCATGATG 166840 36 100.0 36 .................................... CTTGAAATGGGCGGATTGCGTGCAATGGGTGAGACG 166768 36 100.0 38 .................................... TTCACGTGAAACAAACCGCACGACATCCCGATAGGACG 166694 36 100.0 35 .................................... TGCTACCCTTGTGGGTAGTGTGGGTTTCCCGATTG 166623 36 100.0 35 .................................... GTGATCGGCACCGTTGAGTCATCATTGCGCTGGGA 166552 36 100.0 36 .................................... GTGAGCATTGCGGCGTTTGGGTTGCACAATATGCGT 166480 36 100.0 37 .................................... TCCACGTTTGATGACCTATTTGAAGACTAGTGATTAG 166407 36 100.0 36 .................................... GTGGCGCAACACGCGGCGAGTGACGCGCTGGTGCTG 166335 36 100.0 36 .................................... CGTCATAATATCCTCGTAACGCATGTCCGAGTCCAC 166263 36 100.0 36 .................................... TCCTACCCCAGTTCATCAATTCCGCGACATAATCCA 166191 36 100.0 37 .................................... GCGATGCTGGACAACCTCAAGCTCGGCTACGGCGGCA 166118 36 100.0 36 .................................... TACGACGCCATGCGACTCGCAGTCAAGGCAATGCAA 166046 36 100.0 35 .................................... GCGGCCAACGACTCCTCTTCCTCCCGGCGGAGCAG 165975 36 100.0 35 .................................... ACGAAATGGCGTGTCGACGAATATTCTGAATGCTG 165904 36 100.0 36 .................................... CAGCAGACGACCGCCGACCTGAGCGCGTTGAAGCAG 165832 36 100.0 37 .................................... CTATGGGGCGCTACTGGTGTCGGAAAAACCCGACATG 165759 36 100.0 36 .................................... CGGACATACAGGGGTTCAGGCGTCACCCAAGCCGCG 165687 36 100.0 36 .................................... AATATGATTCCCGTAGACCCGGTGACACGACGACCA 165615 36 100.0 35 .................................... ATTCAGGGCGTTGCCGCATTCGTCCGCGAAGTCGA 165544 36 100.0 37 .................................... GGAGTCCCGACCGTATGGTTGCAATTGGACTGAGATG 165471 36 100.0 36 .................................... TCCTCCATTCGGTCCATCTCGTCTTGCAGCAGTCTT 165399 36 100.0 38 .................................... GTTGATGATCTTCTGGTTCGCTCCGTCGCGCCCGCCAA 165325 36 100.0 36 .................................... ATGCTGGAAGGTAACGGCGTAGGGCATGGCAGAATC 165253 36 100.0 36 .................................... TGGGTGCCCTTGCGCCAACACTGTCTTTCGCGCAGC 165181 36 100.0 36 .................................... GACTACAGCAACGCAGAGACCGCCGAACTGAACACC 165109 36 100.0 35 .................................... GTTGGGAAAACCCACACGTTCGTCCCCGTTGGATA 165038 36 100.0 34 .................................... GCACAAAAAGCTGCCCCCTGCTCAGTGGCGGGAT 164968 36 100.0 37 .................................... CCGGACGTACTGGTGTTCTTCAATGAGACGGCGAGCG 164895 36 100.0 36 .................................... AACATTGGGCACCGACCCGGGTGTTCTGGTTACGGA 164823 36 100.0 35 .................................... TGTTGCGAGGGGCCGTGGGCCTTGACCTTGGTGAC 164752 36 100.0 37 .................................... CCGTTACAGGGCGTATGGGGTGGCGTGAACAGGAGTA 164679 36 100.0 37 .................................... AAGCCACATCAGCCGAGAACAATGCGTATCCTTCTTC 164606 36 100.0 38 .................................... CCGCCAGCAGCGTGCACTGTTACGAGGCTTCTACGGTC 164532 36 97.2 36 ................T................... CGGCATGTCACCGACATGCTGGATTACGTCGCGGAA 164460 36 100.0 37 .................................... GCGTTCCAACGGTCCATGCTGCCGTTGCCGTGCGGCG 164387 36 100.0 35 .................................... ATGTTGTCGAATCCACGTTTCTTTCTCTTGCGGTT 164316 36 100.0 37 .................................... GTTACCGGAATTGTCAAGGCGATACTTGGGCAACGCA 164243 36 100.0 36 .................................... AACCAGTTCATCGACATCCTCGTAAATCGTATCGGC 164171 36 100.0 35 .................................... TCATCGACCACGTAGTCAAGTCAAAGGACAACCGG 164100 36 100.0 36 .................................... GCCGACCTGTTCGACGATGACCTGGATGCGGTGGGC 164028 36 100.0 36 .................................... TAAGCGACCAGGACGCGAGGACCGCTAGCGAACGGT 163956 36 100.0 38 .................................... ACCTGATTAATGCACCACAATTCGACCTCATTAACGTG 163882 36 100.0 37 .................................... TCGGTAATCCAGCAGCCGGATATGCCGACGAATCGGC 163809 36 100.0 37 .................................... GCGAAATGGGCGGCGAACAGCTACACCGTGAAATACG 163736 36 100.0 35 .................................... TCGGGACGCACGTGGCACGGCGTGCTCGCGAATAA 163665 36 100.0 35 .................................... GCGGGTATGACTTGCGTATCACGCCCCGCGTAAAA 163594 36 100.0 35 .................................... GCGAGTGCGATGTGCATGTTCCCGTCGTTGTCGAG 163523 36 100.0 36 .................................... GGCGCGCGTCTGCACATGATTGTCGTCCCGCCCGGC 163451 36 100.0 35 .................................... CGCAACATCGGTCATACTTGGTTCTGTGTCCATCA 163380 36 100.0 37 .................................... CTCAATATCTGGACTCAGATATACGGCGCGCTGGGTA 163307 36 100.0 35 .................................... GACATGCCGTTGTATCGCATCCCGTTGGACGGTAT 163236 36 100.0 35 .................................... CATGAGATAGGCGTATTGCGATACAAAAAAGCCAA 163165 36 100.0 35 .................................... TTGGTGGGGGCTAGCTCGTCGTGGCATATGCTGAC 163094 36 100.0 36 .................................... TGGTCACGGCGATTCTGGGAGTGGAAAATCTGCACC 163022 36 97.2 0 ...................................G | ========== ====== ====== ====== ==================================== ====================================== ================== 60 36 99.9 36 CTTGCATACGTCAAAACGTATGCACTTCATTGAGGA # Left flank : AAAATCCATACGGCTTATTTAAGGAATGTGATTTATTTTTTCGCGATATGCGATAGATGTTTGATAACTAAATAGTGGTACTAAGATAAGGGGGGTGCGGATGTTTTTTTTTGACGGTCAGGCGGCCAGTCCAAGGTGTTTGCGGTATTGCACGGGGCTTATCCAGTCCAGTGACTTCTTGATCCTAGTCTCATTGTAGTGGGTCAGGTAGGTGTATTGCTTCAATGTTTGTTGGGCGGGTTCGGCAGTGTTTTTCCGCCCCTTACGCTTACGAAATCAACGGCTCGACGACGAACTGACATCCACGAAAACAGCAATAGCGCCTATTGTTTTTGCGAGATCTGAATCGCTCCTGAATGAGCTACTAGGCATTCGCAATGAGAATATAGCGGTTCTGTGGATCTGAGAATCGAGATTGCTATGTTAGAGGACGTAGCCGTCCTCCACCTCTCGCAGTTTTGTCGGGAAAACCTCCAGTGATACTATAAATTCGAGCCTGC # Right flank : AGTGTGAGGCATGAAAGAAAACTCTTACACTCTGGCCTTGCATATGATGTGACCTGGTTTTTTGTTCCGCATCTCCTATCAAGTGAGAGGAAATGCGGAACAAAAACCAGGTCACATCAATATCGATACACTTCCGTGTGAAGCTCGTCATAGTGGATTGCACGAAAAACAGGTAGGGGGCTTTCCGCCATCAACAGCGGAAAGCACCCTATTCTTATGGTCTATCTGCCCTAATTAGAGCACCTCACTCCGCAGCAATCGCGGCCTTGAGCTCCTCGACCTTGTCGGTCTTTTCCCACGGGAACTCAACGTCTGTGCGGCCGAAGTGGCCGTACGCGGCGGTCTTCAAGTAGATCGGGCGCTTCAGGTCGAGCTCGTCGATGATGGCGGCGGGGCGCAGGTCGAAGACCTTGCGTACGGCGGCGGCGATCTGGCCGCGCGTCACGCCTTGCTCGGTGCCGAAGGTCTCCACGTTGACGGATACCGGGTCGGCAACGCCA # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTGCATACGTCAAAACGTATGCACTTCATTGAGGA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-3.90,-4.10] Score: 0/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [56.7-50.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA //