Array 1 60641-59255 **** Predicted by CRISPRDetect 2.4 *** >NZ_JDUV01000007.1 Bifidobacterium callitrichos DSM 23973 contig7, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================= ================== 60640 36 100.0 28 .................................... ACGAAACTGCTGTTCGCTTCGGACTCGG 60576 36 100.0 28 .................................... CGGTCCGGGTTCCTCATGGTGGGCCGCT 60512 36 100.0 28 .................................... GAAACGAGCGTGGTGTCGTGGCCCGCGT 60448 36 100.0 29 .................................... CTTTCACACAGCAAGCCGGACTCCGCGTC 60383 36 100.0 28 .................................... CTCGTGGAGCGGTGGACCTACCGGCAGG 60319 36 100.0 29 .................................... TCAACGCCCACGTGGTCTTATGACCAATA 60254 36 100.0 28 .................................... TCGTGCGTCGCCGGGACTTGCACCCGGC 60190 36 100.0 28 .................................... GAAACGAGCGTGGTGTCGTGGCCCCCGT 60126 36 100.0 29 .................................... CTTTCACACAGCAAGCCGGACTCCGCGTC 60061 36 100.0 28 .................................... CTCGTGGAGCGGTGGACCTACCGGCCGG 59997 36 100.0 28 .................................... CGGTCCGGGTTCCTCATGGTGGGCCGCT 59933 36 100.0 28 .................................... GAAACGAGCGTGGTGTCGTGGCCCGCGT 59869 36 100.0 29 .................................... CTTTCACACAGCAAGCCGGACTCCGCGTC 59804 36 100.0 28 .................................... CTCGTGGAGCGGTGGACCTACCGGCAGG 59740 36 100.0 29 .................................... TCAACGCCCACGTGGTCTTATGACCAATA 59675 36 100.0 28 .................................... TCGTGCGTCGCCGGGACTTGCACCCGGC 59611 36 100.0 28 .................................... AGGTGGTCGAGTAGGTGGTCGGTGAAGT 59547 36 100.0 28 .................................... CCGACGAGGCGCAAACGTTCGGCGGCAT 59483 36 100.0 29 .................................... GAAGCACTCGGGTACTGTTCGTGACGTTT 59418 36 100.0 28 .................................... GAGTCCCGAGGATATTCGCGAGGATACG 59354 36 100.0 28 .................................... GCGTGTTTGTGTGTATCGCGCGTAGGTA 59290 36 94.4 0 ......................C.......T..... | ========== ====== ====== ====== ==================================== ============================= ================== 22 36 99.7 28 CAAGTCTATCAAGAAGGGTGAATGCTAATTCCCAAC # Left flank : ACTCAACGGGACCGGATTGACGATTCCCAGTTCGCTGAATGACTTCGCACAACAATATGGCTTGTACTGTGAAGGGCGTGTCGACCGACTCGCGGTGCCCGAATATGCGGGCATCGTATGAAAAGGGATGAGGACAGTGGCGGCATGTGGTGTTTGGTGATGTTTGACCTACCGGTCAAAACCAAGCAACAGCGTCGTGCTGCTACAGAATTCAGGAACATGCTGTTGGATATGGGCTACAGCATGGTGCAGTATTCGGTTTACGCCAGATACACTCCCACGCAGGCGGGAAACCGTTCGACGGTTCAGGCGATCAAAGCGGCTTTACCGGCACACGGATATGTGCGCGTGTTGCACATCAGCGATCACCAGTGGTCTTCGGCACTACGATTCTCCAACTCCGAACAGGACCTGGAAGAGGAGACTCCGCAGCTGTTCACGCTTTTCTGAATGAAGAAAGTGCTACAAACCGCAGAAAATGGCCCTTCTTGAGAGGCTAT # Right flank : CCGTATCCTGCGTGAATTCATTGCTGAATTGACTGTCTCTTAGACCCGTTTCGTGGCCGGCTGTATTGCGATTATGGACGCGCTGCGTGCGCGTCATGCCGGCCCGCCTGTCGGCTTGCACGTTGCCTACAAGCAGCTCCGCCGCTTGCTTCACGGCAACGCCCCGACAAGAGGAACCCTGACAAGAGGAGTCAGGATGAGACCAACGAATTTTCCGGCGCGAGATGTTAGACGCTCGGCCGCGCCATCATGAACCGACTCAATTGCGCCGCTCTCCCGCACCACTTCAGCCATGCCGCCCGGTTGCGCCCCTGTCTGTGCCCCCGGCGGTGCCGCTCAACGCAATTTTCGTCGATTTTGGCGTTGAGCGGCACGACGATACGTCGTTACTGCCTCGCCGTCGTTTTGACATGTTGTCAAAACGGCTATTTTCCAACGATTCTGCAATAGCCAGTATTCCAAAAACTGCCTCTGCCGCCGCCTTGTCTGCCGTTCAACGT # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CAAGTCTATCAAGAAGGGTGAATGCTAATTCCCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-0.30,-1.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [48.3-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA //