Array 1 4070366-4066429 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP048114.1 Edaphobacter sp. 12200R-103 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ==================================== ================== 4070365 33 100.0 34 ................................. CCAGCCGTAGCCAGCCCATGCAGAACCTTACCGA 4070298 33 100.0 33 ................................. CGCAAACTGTGGAAGTACATGACGCACGAGGTC 4070232 33 100.0 34 ................................. AAAAGAGTGTAGCCTGCGGTGCGGTCATGCTCTT 4070165 33 100.0 34 ................................. TCACGAGCGATTCGGAGCGGAGTGTCCATACAGC 4070098 33 100.0 33 ................................. GGATGCAACTTCACGCGACCCTGCGGCCTCCAC 4070032 33 100.0 35 ................................. ACAGGCACTACCGCCACGGATTCAGCCGCAGACCT 4069964 33 100.0 33 ................................. GACCATCGTCGAGTACGCTGATCGTGCCATGTA 4069898 33 100.0 35 ................................. TCCAGCATGACGCTGGTCCCGTGCGCCGTGTAGCG 4069830 33 100.0 35 ................................. GCCTTGTCCTCAATCAGCACAGCGCGGATTGAAGG 4069762 33 100.0 34 ................................. TGACCCAGAATGGCACTAAAGACGGATATGCAGC 4069695 33 100.0 35 ................................. TGTTGGACGGCGACCAGACCAGGAACGCGACGGCC 4069627 33 100.0 35 ................................. TGTTGGACGGCGACCAGACCAGGAACGCGACGGCC 4069559 33 100.0 34 ................................. TGATTCCGGCGAAGGGAAAGATTCCGTGCCCGGC 4069492 33 100.0 34 ................................. GCTGGTACGACAGGGCATGATCGACGCGGTGCAG 4069425 33 100.0 34 ................................. TTCCTATAGACCTCATAGAGCGAGTGATCGACTG 4069358 33 100.0 34 ................................. ATCATCGCCCGGCGCGGAAACAAGAAGATTCACT 4069291 33 100.0 34 ................................. ATGGTGACGTTGGGAAGGATGACCTTGAGGCTGG 4069224 33 100.0 33 ................................. CCAGCTCCTACTCCCATGCCAAGCTTCGCGCTT 4069158 33 100.0 34 ................................. CCTCAGGTGTGGTCTATCGACGAGGGCGATCAGT 4069091 33 100.0 33 ................................. GCTCTCCAGCTCCAAGGCGGTCATCGACCAATC 4069025 33 100.0 36 ................................. TCTGCGCAAGACTTTGCTGCCTGCGTACAAGCCTCG 4068956 33 100.0 34 ................................. GCCATATCTCTCTATGACCGCATTTTCGGCAAGT 4068889 33 100.0 34 ................................. TTAGCTTTGCCGGCGGCGATGATGTTAGGTCACC 4068822 33 100.0 33 ................................. TCGTAGTCCATAAACGCATCCACGGCAAGAATC 4068756 33 100.0 35 ................................. AGCTTGGGAGCAGCAGGGGGTGCAGAAGCGTCCGG 4068688 33 100.0 34 ................................. AAAGGTGATGAGCGGCTTACGCATCTGCGTTTCC 4068621 33 100.0 34 ................................. TGCTGATACATCGCAGACCACCAGTAGGCCGACT 4068554 33 100.0 34 ................................. GCAAACTCAATTACCTCCATCCAGCGTGGTCGCG 4068487 33 100.0 33 ................................. ATGCTGGCGCACCGGCTAGAGGTAATGACCACG 4068421 33 100.0 33 ................................. ATGGGATAGACCTCACATCCAACGCAAGAGCAG 4068355 33 100.0 36 ................................. ATCGTTGCCCAAGGTCTTTTCCGATCCCGCTCCTGC 4068286 33 100.0 36 ................................. ATTTTTCGCAATCTTTCTGCGAACCGTCACGATCCT 4068217 33 97.0 34 .............T................... TTTTGTCTAGTGAACCGTTGGCGTGTTGAACAGA 4068150 33 100.0 33 ................................. TTAGCTTTTGTGACCGTTACAGGGAAGACGCGC 4068084 33 100.0 34 ................................. TTTGGAGGCGCACGATGAACGAATTGAAGGCGGG 4068017 33 100.0 34 ................................. ACCGTCGTCTCTTCCGTCACCGCTCCTCCTCTCA 4067950 33 100.0 36 ................................. ACCCGAAAAGGGGTTTGTCTGATGTCGGAGCGACGC 4067881 33 100.0 34 ................................. TGAAGCATATTTTGAAGCGTGCTGGTTGCTGGAC 4067814 33 100.0 35 ................................. CCGGTAACTATCGTTTTGAGCGACCCGCAGACACG 4067746 33 100.0 34 ................................. ATCAGCACACGATGATATCGGGTCGGCGGTTTTG 4067679 33 100.0 34 ................................. TCGGTGGATCCAGCGATTGCGCCGAGGGCGGCGA 4067612 33 100.0 35 ................................. ATGCCAGTCGCCGCCGCAGATTCCGCTCACCGGCA 4067544 33 100.0 35 ................................. ATGTGCGCAAGCTGAAGTTCGACGTGCTCCTCTGC 4067476 33 100.0 34 ................................. ACAGTGAGAGCGAGGGGTGCATTCTGCTTTCCAT 4067409 33 100.0 34 ................................. TCTGAATCGAAGCTGGGATAGGCCGGATTAAGAG 4067342 33 100.0 35 ................................. ACTCTCGAGCGGAGGATTGTGCATGCTCCAGAAGC 4067274 33 100.0 34 ................................. AAGGTCCAAGTCAAAATCATCGCGCAATGCGAGT 4067207 33 100.0 36 ................................. ACGAAGCGCCCGTGATCGTCACGGGGCTGTTTCAGG 4067138 33 100.0 35 ................................. CACGTCTCCTGCGTCCACTCGATATTGCTCACCGC 4067070 33 100.0 35 ................................. CCGGCGCTGGTTATAAGCGTCACCTTGTACTAATT 4067002 33 100.0 33 ................................. TGCCCGATACCATGGCCAGAAGAGGAGAGTTGG 4066936 33 100.0 36 ................................. CTTGGAGGCGCACGATGAACGAATTGAAGACTGAGG 4066867 33 100.0 34 ................................. AGGTTGCTGACTGCCGAGCTACCCGCTTCCTGCG 4066800 33 100.0 34 ................................. GAAGGGGATACCGGTCTCATGCGACAGCGTCGGC 4066733 33 100.0 34 ................................. TTGGCTTTGGTCCAGGCGGCGATCGCATCGTTGA 4066666 33 100.0 35 ................................. TATGAAGGCGATGCCGACGCGTTGATCTCGGCACT 4066598 33 100.0 35 ................................. TGCTTATGCGCCGACTGAATCGCATCGCGCTGTTG 4066530 33 100.0 36 ................................. GATGGAACCTTTATATTGGCAACGACTACAGCAAGA 4066461 33 90.9 0 ............G...............T.G.. | ========== ====== ====== ====== ================================= ==================================== ================== 59 33 99.8 34 GTCGCTGCCCACACGGGCAGCGTGGATTGAAAC # Left flank : AATGCTTGTATTGGTCAGCTATGACGTAAGTACAAGCGATGAAGCTGGGCGGCGACGCTTGCGCCGTGTTGCGCGTTTATGCGAAGATCGCGGGCAGCGCGTCCAGAACTCCGTCTTCGAGTGTCTGGTCGACGCAGCGCAATGGGTCCGCTTCCGAGCAGATTTGCTTGCAGAGATCTTGCCCACAGAAGACAGTCTCCGCTTCTACTTTCTTGGCAACGAGTGGAAACGGCGCGTCGAGCACGTCGGCGCTAAACCTTCCTACGATCCGCAAGGCCCCCTCATCCTCTAAGCCGCTCCTTCGAGAGACACGCAAAGGGCTCTGCGCGAACCGGAAGCGATCGCAGAAACATTGGGAGGTTCGCGGAGGTCAGAAGTCGTTTCCTGTGTTCTGCTTAGCGCGGTAAACGGAAATTGACGTACTGCCCTTCCTCCACTGGAGTACCTTCCGCGAATATGACATGCTAAAAGCATGCGCAGACGAACTTAGCTCCAGCGCT # Right flank : CAGGCGCTGCCGGTCGTCCAAAACTGTTCTTCCAGAGATTCAGTAGGTCGGCTCGGTCAAGCGAAGGCAGGCATTCAAGTATTTCAGTTGTAGGACTCATTCCCTCTCCGAAGAGTGATTTGAATCCAGTGACGCTCTGCTCGGGCAAAGAGTCAAGAAAAACTGATCCTAATTTTTTATCCTTGCCAGTTCAACATTCATGAACAGTTGCACAGATAGCGTCTTTCTCCCTTTTCCGGTCAAAATTGCGCTTTGCTGACATGATTTCTGGGCATGAATTACCACGTCCTTCATTAAGCCGTCACGCTATAACGTCATCAATATCGTAAATAGTCAGAAAAGTTTTTGAGGTCTGGAAAGACGGAGTCCAGTTGGTCGTCGTTCAACCCCATCCAAGAACCGATTCCGGCGGTCATCTGTGTGACAGATGTTGTAGGAATCCAGAGGCCCTGCGTCCCGAAGTCGGAGTTGCCTCCTAATTCGAGGTCAGGAAAATCACC # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTGCCCACACGGGCAGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: R [5,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCTCCCCCCACGGGAGCGTGGATAGAAAC with 88% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.80,-8.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [43.3-50.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,9.78 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //