Array 1 13-385 **** Predicted by CRISPRDetect 2.4 *** >NZ_FJNF01000037.1 Archaeoglobus fulgidus isolate Archaeoglobus_fulgidus_oil, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== ========================================= ================== 13 31 100.0 41 ............................... ATAGCTCTCTGTAACTCACTTCTTCCCCATACCATGTTTCT 85 31 100.0 37 ............................... AGCATCTTCGTCTTCTTTATCCTCTTCAGGAGCTCTA 153 31 100.0 36 ............................... GAAGTTTGCGTTTGTTCCAGAAGTTTGTAGAGTGCC 220 31 100.0 37 ............................... AATGCTAATCGGATTCTCTGGTCCATCTGCAAGTGGC 288 31 100.0 36 ............................... TGCTTCATCTTTCTCCAACACTTCTACAATCTTGAC 355 31 96.8 0 T.............................. | ========== ====== ====== ====== =============================== ========================================= ================== 6 31 99.5 38 AGTTGAAATCAGACCAAAATGGGATTGAAAG # Left flank : CTGCGAACTCTGA # Right flank : AAGACTACGACTCTTGGTAATCCAT # Questionable array : NO Score: 9.23 # Score Detail : 1:0, 2:3, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : AGTTGAAATCAGACCAAAATGGGATTGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.52%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.10,-0.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [8.3-25.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.27 Confidence: HIGH] # Array family : NA // Array 1 4-191 **** Predicted by CRISPRDetect 2.4 *** >NZ_FJNF01000173.1 Archaeoglobus fulgidus isolate Archaeoglobus_fulgidus_oil, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================= ================== 4 37 100.0 38 ..................................... ATTTTATCTGCATCTCCACACTACCTCTGCAGGAAGCT 79 37 100.0 39 ..................................... CAATAATCTCATCATTGCCTGGAATTTCCGAAGTTAGGG 155 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ======================================= ================== 3 37 100.0 39 GTAAGAAAGGGAGGCTCCTGAAAATGGAGATTGAAAG # Left flank : CACG # Right flank : TGCAGCCACCAA # Questionable array : NO Score: 8.67 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTAAGAAAGGGAGGCTCCTGAAAATGGAGATTGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.76%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-5.20,-3.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [1.7-8.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0 Confidence: HIGH] # Array family : NA // Array 1 23-284 **** Predicted by CRISPRDetect 2.4 *** >NZ_FJNF01000170.1 Archaeoglobus fulgidus isolate Archaeoglobus_fulgidus_oil, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ====================================== ================== 23 37 100.0 38 ..................................... ATATACTCCTTACCCCCTATCTTCTTGCTTGAAATTGC 98 37 100.0 38 ..................................... TCATCCTCTCGTACAGCGTCCTCGTTGAAATGCCGAGA 173 37 100.0 38 ..................................... TCCCTCTCCCCACTCTCCATATCCTCGATAACGCTGAG 248 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ====================================== ================== 4 37 100.0 38 GTAAGAAAGGGAGGCTCCTGAAAATGGAGATTGAAAG # Left flank : GGCAACGATGCGAGTAAATTCTG # Right flank : ATTATCAGAGGTGTTGTAATC # Questionable array : NO Score: 8.86 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTAAGAAAGGGAGGCTCCTGAAAATGGAGATTGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.76%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-5.20,-3.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [20.0-23.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0 Confidence: HIGH] # Array family : NA // Array 1 4-189 **** Predicted by CRISPRDetect 2.4 *** >NZ_FJNF01000174.1 Archaeoglobus fulgidus isolate Archaeoglobus_fulgidus_oil, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ====================================== ================== 4 37 100.0 38 ..................................... GATACATGCAAAATATCTTGAGTGAGGTGGTTTGATGG 79 37 100.0 37 ..................................... AATGCATCAGATTCATACTCAAGAACCTTCTTAACAA 153 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ====================================== ================== 3 37 100.0 38 GTAAGAAAGGGAGGCTCCTGAAAATGGAGATTGAAAG # Left flank : CTTG # Right flank : ATATTTTCGTAT # Questionable array : NO Score: 8.67 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTAAGAAAGGGAGGCTCCTGAAAATGGAGATTGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.76%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-5.20,-3.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [3.3-16.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.27 Confidence: HIGH] # Array family : NA // Array 1 15-276 **** Predicted by CRISPRDetect 2.4 *** >NZ_FJNF01000171.1 Archaeoglobus fulgidus isolate Archaeoglobus_fulgidus_oil, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================= ================== 15 37 100.0 37 ..................................... ATATCAGCTCTTTTGTGAACTCATCCGTATAGTATGT 89 37 100.0 38 ..................................... AATATCTGATTTATCAGGGCGATGCTTATCTCGGAGAA 164 37 100.0 39 ..................................... AACTGATACCACAACTGGTGCACCAACTGAGGTTGCCGC 240 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ======================================= ================== 4 37 100.0 38 GTAAGAAAGGGAGGCTCCTGAAAATGGAGATTGAAAG # Left flank : ACGAGGAGCTGGATG # Right flank : CAGTAAACATTGACGGCCAAAT # Questionable array : NO Score: 8.86 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTAAGAAAGGGAGGCTCCTGAAAATGGAGATTGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.89%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-5.20,-3.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [10.0-21.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.27 Confidence: HIGH] # Array family : NA // Array 1 30-214 **** Predicted by CRISPRDetect 2.4 *** >NZ_FJNF01000176.1 Archaeoglobus fulgidus isolate Archaeoglobus_fulgidus_oil, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ====================================== ================== 30 37 100.0 38 ..................................... TAAATGCTTTCTCACTTCCCTCTTTCTCATATATCTCT 105 37 100.0 36 ..................................... GAGCTATCAGCAGATGGGCGAGAGTTTAGGCGGCTT 178 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ====================================== ================== 3 37 100.0 38 GTAAGAAAGGGAGGCTCCTGAAAATGGAGATTGAAAG # Left flank : CCATTCATATCACCTCTTCTCCAAACCAAG # Right flank : TGCAAAATAGGGGTGGTAGTAATGC # Questionable array : NO Score: 8.67 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTAAGAAAGGGAGGCTCCTGAAAATGGAGATTGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.76%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-5.20,-3.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [28.3-23.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0 Confidence: HIGH] # Array family : NA // Array 1 14-278 **** Predicted by CRISPRDetect 2.4 *** >NZ_FJNF01000180.1 Archaeoglobus fulgidus isolate Archaeoglobus_fulgidus_oil, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================== ================== 14 37 100.0 38 ..................................... CCCTCGAAGCGGGCCTGCTGCTTGAACCTTACGGTTGT 89 37 100.0 39 ..................................... ACTGCAGGGGTGTGGACACAAGTGGACCGCAACAGAGGT 165 37 100.0 40 ..................................... CAAGTCTTCGATTTCGCCTGCGACTTGTTCAACATCCTCT 242 37 83.8 0 .......T..A..T.................C.TG.. | ========== ====== ====== ====== ===================================== ======================================== ================== 4 37 96.0 39 GTAAGAAAGGGAGGCTCCTGAAAATGGAGATTGAAAG # Left flank : CTCTTATAATCGGG # Right flank : GAACTTCATAAAACAGCACCATTCCATGTATCCTAAATAGTAAATGCTACACGGGCTACCGGAAAGGCGTTTTGAGCGGTTGTGGTGAGAATTCTGCATCACACCTGTAAAAACTTCAACAGCGGGCAGTGCTGTGCCCTAACTGAAAATACATGAAGTTTAAAATTATCAGGAAAGCCGCCGGCGGGATTTGAACCCGCGACCTGGTGATTACAAGTCACCCGCTCTGCCAGCTGAGCCACGGCGGCAGCATGGGGTGATTGAGGCGAAGAGTTAATTAATTTTACTCCACGGTGCTCCTCTCGAATGAGACCATCGCCACGTACAGCATCAACGCTGTGAGTGACAGAAGTATCAGCAGGCTTTGGTCTAAGGGGAAAATCCCGCTGACTCCCGTAAGCAGAACTCTCGAAGATTCTACGGCGTACGTTAGAGGATTTAGGAGAGCCAAGACCTTCATCCAGGCGGGCATGAAGGCGATGGGGTAAATCGCCCCACTG # Questionable array : NO Score: 8.66 # Score Detail : 1:0, 2:3, 3:3, 4:0.80, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTAAGAAAGGGAGGCTCCTGAAAATGGAGATTGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.76%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-5.20,-3.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [13.3-60.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.27 Confidence: HIGH] # Array family : NA // Array 1 11-195 **** Predicted by CRISPRDetect 2.4 *** >NZ_FJNF01000169.1 Archaeoglobus fulgidus isolate Archaeoglobus_fulgidus_oil, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ===================================== ================== 11 37 100.0 37 ..................................... GAAATCGCTGTATTCATTTGGTTTTTTGAATTGGAAA 85 37 100.0 37 ..................................... AAATCTACACCGTTTATTTTAACCGCCTTCATAACAA 159 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ===================================== ================== 3 37 100.0 38 GTAAGAAAGGGAGGCTCCTGAAAATGGAGATTGAAAG # Left flank : CCAACTATCTG # Right flank : CAAGCTGTTCTG # Questionable array : NO Score: 8.67 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTAAGAAAGGGAGGCTCCTGAAAATGGAGATTGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.50%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-5.20,-3.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [10.0-6.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.41 Confidence: HIGH] # Array family : NA // Array 1 4-174 **** Predicted by CRISPRDetect 2.4 *** >NZ_FJNF01000039.1 Archaeoglobus fulgidus isolate Archaeoglobus_fulgidus_oil, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =========================================== ================== 4 30 100.0 38 .............................. GCAGACGACGTACACTACTGGGGCGTTGTCAAGGAACA 72 30 100.0 43 .............................. TAAGAACATCTCATAAACTTGTGTTGGACTCGGTAGCTCCCAA 145 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== =========================================== ================== 3 30 100.0 41 GTTGAAATCAGACCAAAATGGGATTGAAAG # Left flank : CGGG # Right flank : GGCAATGGCGACTTTTGCATAGGTGGCAAGCGTGGCAAGAGGAAAAAGATTTTCTAATTTTTTTATGAATGTAGATTATGAAAGAGACGATTCAGCTTGCTATAGGGGTGATGCTGTTGGCCATGCTCGGTTGCTACATCTACATTACTGAGTTCTATCACTACGAATCAACTGAAGAGAGCTCAAAAGCTGCGATTGAATATTTGAATCAGCTTAGAGCTCAGAATGGCCTGCCTCCTGTAAAGTGGAATAAAACTCTTTACGAGTTTGCGCTGGAAAGGCTTGAAGATATGCATGAAAGAGGCTATTACAGTCATTATGACCCTGTTACGCATGAGACGCTGATTTACAGATATGTTGAGGGGTATGTTGGAGAGTGTATCTTGAATGGTGTAAGAGGTACAAATCTTCTCTCCAATGGGCTTCAGTCATTATTTGGCTATGAAGAAGAAGCTATAGATATCTGGTCTAAAAGCACCATGCACAAACTCATTCTCACT # Questionable array : NO Score: 8.67 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAAATCAGACCAAAATGGGATTGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.10,-0.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [0.0-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.27 Confidence: HIGH] # Array family : NA // Array 1 63-231 **** Predicted by CRISPRDetect 2.4 *** >NZ_FJNF01000038.1 Archaeoglobus fulgidus isolate Archaeoglobus_fulgidus_oil, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================== ================== 63 30 100.0 40 .............................. TCTGATTTTTCGGCAACAACAAACCTGAACTCAGAATTGC 133 30 100.0 39 .............................. CCTTATCTCATCCTCAGCACCATAAGGCATTTGACCCTT 202 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ======================================== ================== 3 30 100.0 40 GTTGAAATCAGACCAAAATGGGATTGAAAG # Left flank : ATCAGACCAAAATGGGATTGAAAGATCAAGAGCCCATGCCGTCAGAGAATGCGTTGAGGAGTG # Right flank : | # Questionable array : NO Score: 8.67 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAAATCAGACCAAAATGGGATTGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.10,-0.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [51.7-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0 Confidence: HIGH] # Array family : NA //