Array 1 191512-190802 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_VSDZ01000001.1 Aggregatibacter actinomycetemcomitans strain PN_438 1, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                  	Spacer_Sequence                       	Insertion/Deletion
==========	======	======	======	=================================	======================================	==================
    191511	    33	 100.0	    36	.................................	AAGATTTCACACCTGAACAATTAGAAGCGGATCCGA  	
    191442	    33	  97.0	    32	................................C	CCAACTCGAAACTCAGTGACATCGGTTACCCA      	
    191377	    33	 100.0	    35	.................................	GCCTTAGAACGTTATTATTTTGACGGCGATTGGCG   	
    191309	    33	  97.0	    36	................................T	TGCGCCAACATCATGGTTTTTTTCACACCGAAGCCT  	
    191240	    33	  97.0	    38	................................C	AACTGAAAGCCGAATTGCAGATTGCGGAAAATTTTAAT	
    191169	    33	  97.0	    34	................................T	TCTGCGTCCTCCTGGTTGTCGGGTGCATATAGAA    	
    191102	    33	 100.0	    34	.................................	TTTTGAAAAATGGTTAATGGGCTAATAAAGGTTG    	
    191035	    33	  97.0	    34	................................T	TCTGCGTCCTCCTGGTTGTCGGGTGCATATAGAA    	
    190968	    33	  97.0	    35	................................G	CCTGCGTCCTTGTATGCACACCCACACTTTTTCCC   	
    190900	    33	 100.0	    33	.................................	CTACCGGCACCTGGAATTGGTTAGCCAATACCC     	
    190834	    33	  81.8	     0	.......T....G.....A.C...T......T.	|                                     	
==========	======	======	======	=================================	======================================	==================
        11	    33	  96.7	    35	GCAGCCACCTTCAGGTGGCTGTGTGTTGAAACA	                                      	       

# Left flank :   TTGATGAGGTGAAAAATGTTAATGTTGATTACCTATGATATTTCTTTAGAAGACCCGGAGGGAAAAACCAGGTTGCGCCGTATTGCGAAGCATTGTCTGGATTATGGCGTACGGGCGCAATATTCGGTGTTTGAATGCGATGTAACGCCGGATCAATGGGTAAAATTGAAGGCTAAGCTACTGGCGACTTATGATCCGGATTGTGATAGTTTGCGATTTTATCACCTAGGCAGCAAATGGAGACGCAAAGTGGAACACCACGGGGCGAAACCGGCGGTGGATGTGTTTAAAGATGTGCTTGTTGTCTAGCTCGCTAACTCCTAGTTCTCATCAAATTCCCGTCAGGCTAGCGATCCTGATTTTCTTTAACAATTTGGAACAGTTAATTCATTTGTATAACGACGACATGCCCGTTATACTTATCCCACTCTCTATTTTGAAATAAGTTAGCGAAATACAGGAAGTAATCTACTGATTTTTCTTGTTTTTTCATATAGGGA
# Right flank :  GGCGCTTTGTTACATCTGAACTCTGACACCAACTAAACTAAGCACCTTATAAAAATAAGGTGCTTTTCTTTTCCCGCAAACCAACACAAAACTCCTTGCCCTTCCTCCGCAAAATATATAGACTGAACCCCGTTATTAGTCAGGGTGCTTTGTGCTGAGATGATACCCGTGAACCTGATACAGTTAATACTGACGTAGGAAACTAACAGAGAATCACATTCCCTTTCTTTTTTCTCTTCTTTTATCGTCATTATTGCTGATTATCTTTTTTTCGTTAAAAAAAGGAAAAATTATGCAATATGGTTTTTGTTGTCCGTTATTTGTAAATAACGGAGGGCGTGATGAGTAAGGTTGCGCAAGCGTTGACCATCTTCGGTTCGGACAGCGGCGGCGGCGGTGCCTGGGTTCAGGCGGATTTGAAGATGTTCCAAATGCACAGGATGTCGTTTGGTTCATCGGTGGCCGCGCAAAATACCTTGAACGTGGTTGATATTTACGCC

# Questionable array : NO	 Score: 5.71
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.84, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.61,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GCAGCCACCTTCAGGTGGCTGTGTGTTGAAACA
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     F [8,6] Score: 0.37/0.37
# 	Reference repeat match prediction:         R [matched GCAGCCACCTTCGGGTGGCTGTGTGTTGAAACA with 97% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [-3.70,-4.40] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [6-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [63.3-71.7]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0.37,5.28   Confidence: HIGH] 

# Array family : I-C [Matched known repeat from this family],   
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