Array 1 4833-5160 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_NDXW01000002.1 Zooshikella ganghwensis strain VG4 tig00000002, whole genome shotgun sequence		Array_Orientation: Unconfirmed

  Position	Repeat	   %id	Spacer	Repeat_Sequence             	Spacer_Sequence                 	Insertion/Deletion
==========	======	======	======	============================	================================	==================
      4833	    28	  96.4	    32	.T..........................	CTGTTGTTCCTTTGATCGGTACGGCTATTGGT	
      4893	    28	  96.4	    32	.T..........................	AAGGGTTTAGGAGTAACCTCCGTAAACATTTA	
      4953	    28	 100.0	    32	............................	GTTGAGGGTCAGTATCAAAAGGTTATTCCAAG	
      5013	    28	 100.0	    32	............................	TTCACTTTAGTATTGTGACTTATGTTGTCTAT	
      5073	    28	 100.0	    32	............................	TCAACACAATGGAAAGGTTAGCGATAACGAGT	
      5133	    28	 100.0	     0	............................	|                               	
==========	======	======	======	============================	================================	==================
         6	    28	  98.8	    32	TCTCTAAGCCGCCTAGATGGCGGTTCAC	                                	       

# Left flank :   TTTGACTTTTGGCAAGATGAAATGGCTTAATTTCATTTTCAAAAATATTGTCGTGTATCTCTTTAGGAAGCACGTACTGCTTTGTTAGCATGCTTTTCCCCTTAACTCGCCATATACGCTTTTACAATAGGTGCATACTCATTCAAGATGGTCTCTATCTTTTCATCATCATCGATTAATAGTTCATCAAGCTCATACTGAAACTGATGTTTCTCTGCTCTCCATTGCTTTATTAGATCTTGATTTGGTTCTGGCTTTTGCTCTTCTTCATAGATCCACTTTGAGCGTATAGCAATTAACACACCGATGGTTTCTTGCGCGGTTTCGTAACGCGCTAGCTTCTCTGTCGTACTTATAGTCATTGATAATGCTCACGTCAGTGGTCTGAATCAGGTTAATGTAGAGAGTGCTTGTTCCACAAAATGTTCCACGCGGAACATAACACAGTTGATGTGTGGCTTCTGTATAGCTTTATGTACTGGTCTTTCGTCGATGACATT
# Right flank :  CTATAGATCAAACTATGTAAAGCCTGATTGTTAAAGAGCTGTAGCGTAATATATGATCGTTGACCCTTTTTCTCGCCCCTACGCTAACATATTGATTTATAAGCGTGTAAAAGTGGCTTCCAAAAAAGGGTCAATTTGCTCGACTTAAAGGTCAGGTAATACAGTCACCTGCTCTGTTGTTGATAGCCCAAAGTTACACGTATTGATTTCACCAAGCTGCCCCTCTTCTACAGGCATTTTCTCAACCGATACGCAAAAAACTTGCTGATTGGACTGACTGTGTAACACAAAACGGGGCAGGTTGTGTTCAAATGCATACGCTAATCGCTGGATACGGTTTTTCTCCCTCTGGGAGGAACACGATAGCGACGGTAAACACACCAAGGGCCTGCATAATCCTGTGCGACAGGAACAGGCATTTTAAAATCACATAAAGGCCCTACGGGATCATTGGCAAGGTTTAATGCCACTAATGACTCAAGCTGCTTGGCAAATACCCG

# Questionable array : NO	 Score: 3.20
# 	Score Detail : 1:0, 2:0, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     TCTCTAAGCCGCCTAGATGGCGGTTCAC
# Alternate repeat :   TTTCTAAGCCGCCTAGATGGCGGTTCAC

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     R [5,7] Score: 0.37/0.37
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  F [-9.90,-8.70] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      NA [0-0] Score: 0/0.41
# 	AT richness analysis in flanks prediction: NA [60.0-68.3]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         NA [0.37,0.37   Confidence: NA] 

# Array family : NA
//


Array 1 57891-58218 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_NDXW01000003.1 Zooshikella ganghwensis strain VG4 tig00000003, whole genome shotgun sequence		Array_Orientation: Unconfirmed

  Position	Repeat	   %id	Spacer	Repeat_Sequence             	Spacer_Sequence                 	Insertion/Deletion
==========	======	======	======	============================	================================	==================
     57891	    28	  96.4	    32	.T..........................	CTGTTGTTCCTTTGATCGGTACGGCTATTGGT	
     57951	    28	  96.4	    32	.T..........................	AAGGGTTTAGGAGTAACCTCCGTAAACATTTA	
     58011	    28	 100.0	    32	............................	GTTGAGGGTCAGTATCAAAAGGTTATTCCAAG	
     58071	    28	 100.0	    32	............................	TTCACTTTAGTATTGTGACTTATGTTGTCTAT	
     58131	    28	 100.0	    32	............................	TCAACACAATGGAAAGGTTAGCGATAACGAGT	
     58191	    28	 100.0	     0	............................	|                               	
==========	======	======	======	============================	================================	==================
         6	    28	  98.8	    32	TCTCTAAGCCGCCTAGATGGCGGTTCAC	                                	       

# Left flank :   TTTGACTTTTGGCAAGATGAAATGGCTTAATTTCATTTTCAAAAATATTGTCGTGTATCTCTTTAGGAAGCACGTACTGCTTTGTTAGCATGCTTTTCCCCTTAACTCGCCATATACGCTTTTACAATAGGTGCATACTCATTCAAGATGGTCTCTATCTTTTCATCATCATCGATTAATAGTTCATCAAGCTCATACTGAAACTGATGTTTCTCTGCTCTCCATTGCTTTATTAGATCTTGATTTGGTTCTGGCTTTTGCTCTTCTTCATAGATCCACTTTGAGCGTATAGCAATTAACACACCGATGGTTTCTTGCGCGGTTTCGTAACGCGCTAGCTTCTCTGTCGTACTTATAGTCATTGATAATGCTCACGTCAGTGGTCTGAATCAGGTTAATGTAGAGAGTGCTTGTTCCACAAAATGTTCCACGCGGAACATAACACAGTTGATGTGTGGCTTCTGTATAGCTTTATGTACTGGTCTTTCGTCGATGACATT
# Right flank :  CTATAGATCAAACTATGTAAAGCCTGATTGTTAAAGAGCTGTAGCGTAATATATGATCGTTGACCCTTTTTCTCGCCCCTACGCTAACATATTGATTTATAAGCGTGTAAAAGTGGCTTCCAAAAAAGGGTCAATTTGCTCGACTTAAAGGTCAGGTAATACAGTCACCTGCTCTGTTGTTGATAGCCCAAAGTTACACGTATTGATTTCACCAAGCTGCCCCTCTTCTACAGGCATTTTCTCAACCGATACGCAAAAAACTTGCTGATTGGACTGACTGTGTAACACAAAACGGGGCAGGTTGTGTTCAAATGCATACGCTAATCGCTGGATACGGTTTTTTCTCCCTCTGGGAGGAACACGATAGCGACGGTAAACACACCAAGGGCCTGCATAATCCTGTGCGACAGGAACAGGCATTTTAAAATCACATAAAGGCCCTACGGGATCATTGGCAAGGTTTAATGCCACTAATGACTCAAGCTGCTTGGCAAATACCC

# Questionable array : NO	 Score: 3.20
# 	Score Detail : 1:0, 2:0, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     TCTCTAAGCCGCCTAGATGGCGGTTCAC
# Alternate repeat :   TTTCTAAGCCGCCTAGATGGCGGTTCAC

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     R [5,7] Score: 0.37/0.37
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  F [-9.90,-8.70] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      NA [0-0] Score: 0/0.41
# 	AT richness analysis in flanks prediction: NA [60.0-68.3]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         NA [0.37,0.37   Confidence: NA] 

# Array family : NA
//


Array 1 2212060-2212387 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_NDXW01000001.1 Zooshikella ganghwensis strain VG4 tig00000001, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence             	Spacer_Sequence                 	Insertion/Deletion
==========	======	======	======	============================	================================	==================
   2212060	    28	 100.0	    32	............................	ATTAGACAGTGCAAAGAGCTTGGACACACCCA	
   2212120	    28	 100.0	    32	............................	TCGGATGATGCTCAGTTTCTGGAAACCCGAAA	
   2212180	    28	  96.4	    32	A...........................	AAAAACAAAGCGCTTCATTACGCCTCCTTTCG	
   2212240	    28	 100.0	    32	............................	AATTGTCGTCTGGCTTCGAACCAACCTTGGTC	
   2212300	    28	 100.0	    32	............................	AGCAAAGTCCAGTAGTGAAGCCCCTGCCAATT	
   2212360	    28	  89.3	     0	...........T.....A......T...	|                               	
==========	======	======	======	============================	================================	==================
         6	    28	  97.6	    32	GTTTACTGCCGCATAGGCAGCTTAGAAA	                                	       

# Left flank :   TATATTATATTTTGGGTTAACATCATAATTTAGCTTGAGGATCCCTTGAGGTGTATGAGAGTATCTGAATAGCAAGTCAAAGTTATGTTTGGTGAGAGAGCTGAACTGTAGTATTAATGCTTGGCGTCGGATCATTTATTCCGCCACGCCAGAAGGCCGTCCTTGGCCTCTGTCGCTACCGATGCTCCCTGCATCGGCTCCATAAACAATCCACCACCAAGCTGCAAACATTGTTATATGCTGATAGCTCTACATAGAGAGATTTACAGGAAAGTGTATAAAATGAAACTTATTAGTCATTATAAAGGTTTGTAGTCCGCTTCATGAAAGCAGGAGTGTTTGGTATTCTACTGTAGCAATGTGTGATGAACCCTTTTTTTTAAGTGAATAAATAACCACAATAAAATCAATATGTTATAAAATAGACTACAAAAAGGGTATTTTGGCATGAACAGGCAGTCAGCTCTTTAAAAACTTGGGCTTAGTTATAAAAATCTCAA
# Right flank :  AGTACTCAACTTGTCGTTGAGTCAAGCCTCCAGGGATTGATTTACGGCGTGTTCGGAGGGAGTTAGCAGGTCTTTTTAATATACATACACATAAAGTCCCTTTTGGTGATTAAAGAGTGGATGTTTGACCAAAGGACATCTCTAAAAATGCACTTTTTTTAAAGGTGCCCTAAAGAGTAAGTATTTTTAGTTTGGATGATAAAAGAGTATGGATGATATACCCGCTTCAGACTTAAAAACAATTTTACACTCAAAACGCGCTAATATTTATTATCTCGAGTACTGTAGAGTGTTGGTTAATGGTGGGCGTGTTGAGTATGTTACTGACCAAGGGAAAAAATCTCTTTACTGGAATATTCCCATTGCAAACACTACCTCAATTTTACTTGGAACTGGAACTTCTATAACGCAGGCTGCGATGCGTGAGTTGTCTAAAGCTGGGGTGATGGTTGGTTTTTGTGGTGGAGGAGGAACACCTTTATTTTCTGCAAATGAAATTG

# Questionable array : NO	 Score: 6.14
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTACTGCCGCATAGGCAGCTTAGAAA
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:53.57%AT]
# 	Reference repeat match prediction:         F [matched GTTTACTGCCGCATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-8.00,-7.70] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [0-3] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: F [65.0-48.3]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [5.55,0   Confidence: HIGH] 

# Array family : I-F [Matched known repeat from this family],   
//


Array 2 2223425-2223752 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_NDXW01000001.1 Zooshikella ganghwensis strain VG4 tig00000001, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence             	Spacer_Sequence                 	Insertion/Deletion
==========	======	======	======	============================	================================	==================
   2223425	    28	 100.0	    32	............................	TTCAGTACATTGCGTGCAAAAATATGAAAATA	
   2223485	    28	 100.0	    32	............................	ATATCCCCCAGGGCAAAATCCACCACTGATAT	
   2223545	    28	 100.0	    32	............................	TGCAAACCACCAATCAGCGATAGTCCACCTAA	
   2223605	    28	 100.0	    32	............................	ACCCAAGCCACAGCCCACATCAAGTATTGATA	
   2223665	    28	 100.0	    32	............................	TTTACCTTCAGTAGAGAGAATAAAGCGACTTT	
   2223725	    28	 100.0	     0	............................	|                               	
==========	======	======	======	============================	================================	==================
         6	    28	 100.0	    32	GTTTACTGCCGCATAGGCAGCTTAGAAA	                                	       

# Left flank :   GAAAGTTGCAGAACATTATTCAGGTCAGTTTAATACGTATGGTTTAAGTAAGGGTGCAACAGTTCACTTATTTTAAAGAATACAGTTTGAGTTAAAGGATAAGATAATACTCTTTGTTTTTAGAATATTAATGTAAATAGCGCGTTTAAAGTAATGTGGATTGTTATGACCGTTAAGTCTGCTTATGGTGCTCTTGACTACAACGGATATTAATTAAATTGACTACGGCAAGTCTAATAATAGTAAACTTGCCCTGGGGCTTCATCGCTTGATGGTCGTACTTGCACTTTAAAAACAATTGTGGTTGTGATCGTTAGTCTCTAATGACCAGACTAGCCTTACTAAAAAACCTCAGCAGTGAGTACATCAAACCCTTTTTTAAGAGGCTGCTTTTAAGTACCTAAAATCAATAGGTTATAACATGCCTCAAAAAAAGGGTATTTGGGTGTGAATAATCAGTCAGCTCTTTAATAGTCAGGAATTCAAGCTTAAAATGTCTA
# Right flank :  ACAGTGTGTCCCCTCTGCTGGCGTGCGTGACTCTCCCTAGCCCTTGCTGTTAGCCTTTTCCTGCATCATTAATAGTTCAGGAGAAGCACCGTGGAAGCCGACTCACCCACAGATATCCCTTTAACTTTGGAAGACGTCAAGGCTAAGTTTGAAGCCTGGCGGCAGCGTCCTAAACCTCGTAAACCCTTTCCTCATGCATTATGGCATGATGTCTTTCGACTGCAGGAGCAGTATAAACTCACTAAAATATTAACCACATTACGGCTGAGCCGTGCTCAATTAATACATAAGCGTGCGGTATTATTAGGGGAACCCGATTGTCTTGCAGAGAAAGCGCCACCTAAACCATCGCCATCCCGTGCATCTGTGGCAACTGATTTTATTAGCGTCGATCTTACCTCGACGACAGGTGTGGTTAATCATCAGGATAACAAGCCGTCAGTATCACCGATGGTATTTGGCATTGAGTTAACCCGTCCTGATGGCACGGTCTTAAAAAT

# Questionable array : NO	 Score: 6.26
# 	Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTACTGCCGCATAGGCAGCTTAGAAA
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:53.57%AT]
# 	Reference repeat match prediction:         F [matched GTTTACTGCCGCATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-8.00,-7.70] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      NA [0-0] Score: 0/0.41
# 	AT richness analysis in flanks prediction: F [66.7-40.0]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [5.14,0   Confidence: HIGH] 

# Array family : I-F [Matched known repeat from this family],   
//