Array 1 182444-179794 **** Predicted by CRISPRDetect 2.4 *** >NZ_WYAK01000008.1 Klebsiella pneumoniae strain VNMU131 MRSN489784_contig00008, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 182443 29 100.0 32 ............................. GAGCAGGCACCCGCCGCAACGACGAAGAGCGC 182382 29 100.0 32 ............................. AAATCAGCCAGCACCACGATTCTGGGAAATTT 182321 29 100.0 32 ............................. ACAGGCTTACCCGTATTGAGACGGTTGCTGAA 182260 29 100.0 33 ............................. GAAACCCCATCAGATGACCCTCCCCATGTTGGC 182198 29 100.0 32 ............................. TTGCCTGGTCTGCTTGGTGATGATCCGTGGTA 182137 29 100.0 32 ............................. TACAGAACGACTGAGGCGGCGTGTATTGCATA 182076 29 100.0 32 ............................. GATCTTAACTCTATTGCCAATGGCGCAATTCA 182015 29 100.0 32 ............................. GGCGATGCGCGCTCTGCTGGCTATCGGTAAAA 181954 29 100.0 32 ............................. AATGCAGCAACCGGCAAATATATCGCCGGTAA 181893 29 100.0 32 ............................. GGGCTGCCGCACGCCTGGGACGAGTCGAGCCC 181832 29 100.0 32 ............................. CCGCAATAACAAAAATAAATGAGGGTTAAAGT 181771 29 100.0 32 ............................. GTAAATGGGAATGAGTAGAAGAGCGTCATTGG 181710 29 100.0 32 ............................. CCCCCGCGCACATGCTTAAACGCGCTATCACG 181649 29 100.0 32 ............................. GGCATCTGTTGTGTAATGTTGAGTTTTTTTCA 181588 29 100.0 32 ............................. CAGGTTAAACATGTAAAAAATGACCGTCGCCG 181527 29 100.0 32 ............................. CACATTGCCCGGTCTGAAAAGTATTTGAAAAT 181466 29 100.0 32 ............................. TCCGCACAGTCAAACGCTCCAGACACCAACCC 181405 29 100.0 32 ............................. CCGGAACACCACCAGTAACAGCTACTGTAGGC 181344 29 100.0 32 ............................. TGACCCTGTTGATTTTGTTCCAGGTAATACGT 181283 29 100.0 32 ............................. TTAACCTCGTCGTTCTGGTTTCCGCCCAGGAT 181222 29 100.0 32 ............................. GAACCTGAATTCGAAGGGTGGGTCATCCTTCC 181161 29 100.0 32 ............................. GGACCCCGAGCGACCCGGTCACCCTCCGACCT 181100 29 100.0 32 ............................. CCGTCGAACGGCGGTTATATCCATCTTGAGTC 181039 29 100.0 32 ............................. ACCGATCCCACAATTGCGGCGGTTGAGATTGA 180978 29 100.0 32 ............................. GTTGGTAATTACTGCTGTGTGTTACGGATAAA 180917 29 100.0 32 ............................. CCGATTGTCTGGCGGTCGAGCGCCATTTGCTC 180856 29 100.0 32 ............................. TGCCGGACGTTGTACCTGTGAGTTAATTCTTC 180795 29 100.0 32 ............................. CGATAACCGGGCGTTTCGACTGAACTCACCTC 180734 29 100.0 32 ............................. TTAATACCAGGGGGCAGGTTCAGCAGGTCCCC 180673 29 100.0 32 ............................. CCGCTTTAACCCGCTCCGGCAGATCCGGGTGA 180612 29 100.0 32 ............................. CCCTCCGCTTTCAGGGTGTGGCTGATATCACC 180551 29 100.0 32 ............................. CGCGCTGCGAATTTGTTGGTCGATTTCGATCT 180490 29 96.6 32 .............A............... TGGGTAGAGGTTAACTGGTTATTGGTCATTGA 180429 29 100.0 32 ............................. ATCGCGGAGGCCTTCGGTGTGTCTCTTTCCTG 180368 29 100.0 32 ............................. CCGTTGTCAATATCTCCCGGCGTCCGCGCCAG 180307 29 100.0 32 ............................. CACGTCCGGAAACCACGGGTTATCCGTGTAAT 180246 29 100.0 32 ............................. CAGAGGTCCTTATCTTTTCAACGTCAAAGTCG 180185 29 100.0 32 ............................. GCAATCCCAGAGCGCGAATATCTTGGGCTCTC 180124 29 100.0 32 ............................. GACATGGCGCGCGAGTTTATCGACGCCTGCGC 180063 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG 180002 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 179941 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 179880 29 100.0 29 ............................. GGGTTCACTTGGGTGAAACTGAACTAACT 179822 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================= ================== 44 29 99.4 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCCTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTAGT # Right flank : GTCCACTAACGTTATCGATCCTGAGAGTGGGCACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTAGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATTC # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [51.7-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //