Array 1 38141-38831 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADFCA010000014.1 Moraxella sp. K1630 Contig_014, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 38141 28 100.0 33 ............................ AAAAGCCCCGCAAAGTGTCACCCTTGCCGAACT 38202 28 100.0 33 ............................ TACGCTATTCAAAAACCCCCAAAACTCACTCAA 38263 28 100.0 33 ............................ TAGATGCAGAGATTGGTGCATTACTAGGCTAAC 38324 28 100.0 33 ............................ GATTGGTATTTTAATGCCCAAAAAGCCCCTGCA 38385 28 100.0 32 ............................ AATCATACCCCTGCTAACCCTTGCTATATAAG 38445 28 96.4 32 C........................... CGATGACCTAGCAGATTATTTGCGAGATGATA 38505 28 100.0 32 ............................ TTTGTACTGATGTTTACCGTAGCCTTTATGCT 38565 28 100.0 32 ............................ TTACTGATAGCAAATTGGTGTTTGGTAGTACC 38625 28 100.0 32 ............................ TTGTAAACTCTTAAATGAGAACAACACCCATT 38685 28 100.0 32 ............................ GTAAAATCCAACTCAAAACACAGTGCCATCAA 38745 28 100.0 32 ............................ AACGGATATTGTGCGTTTTAATCGCATAGAGG 38805 27 89.3 0 ..........A..C..........-... | ========== ====== ====== ====== ============================ ================================= ================== 12 28 98.8 32 GTTCCTTATCGCATAGATAACTTAGAAA # Left flank : CGATAGCGGACGTGGGCGAGCGTGCGACAGGCTATGTGGTGGTAGAACGCCAACAGCGAGCGGGTTTGCAAAAACAAGCCGAGCGATTTGCCGAGTTTAAAAATCTGACGGTGGAGCAGGCGTTGGAGCATTGTTTGGCGTACAAAAAACAGCCAAAGGCGTATCCGTTTATTGAGCTATTCAGCCAAACTAATCAAGTGCCGTATCGGCTGTATGTCAAACAAACAGTCGTGGATAAGGCGGTGGACGGCGAGTTTACGGTCTATGGTATGCACAATCAAGGCGGAGCGATGACGGATAAGGCAACTGTTCCACATTGGTGATTGAGTTTGGTTGTGCTAAAATAAGGGGTATGATACAGGTTTATGCCCTTTATTTTTTGACTATTTAAAAACTTGATAAAAATCAACTACTTATAACAAGGCTAAAAAACATTGGGTAAATGCCCAAAATATGGCTTTAAGTCTTGATATAAGTGGGTTTTATGTTGTATAATTCTA # Right flank : ATTGTATTGAACCGTATCGCAATACAACTCAATACAATCCACGCCGCACAGATAGCTTACAAAGCAAAAAAATGCTATAATAACCCACATTTTTCAAAGAATTAGGCGTATGCCAAAGGATTTTTATGAGCGAGCAACTTCCTACCAACGACTACAATGCCAGTAGCGTGCGAGTTTTGCGTGGACTAGAAGCGGTACGAGTCCGCCCTGGTATGTACATTGGCGACACCGATGACGGTTCGGGCTTGCACCACATGGTGTTTGAGGTGGTGGATAACGCCATTGACGAGGCACTCGCTGGGCATTGCGATGAAGTGCTGGTTACCATTCATGCCGATGAGTCGGTGTCGGTGTCGGACAACGGACGAGGCATTCCTGTGGATATTCACCCCGAGGAGGGCGTGTCGGCAGCCGAGGTTATCATGACGGTCTTGCACGCAGGGGGCAAGTTTGACGACAACAACTACAAAGTCTCAGGCGGTCTGCATGGCGTGGGCGTG # Questionable array : NO Score: 3.20 # Score Detail : 1:0, 2:0, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCCTTATCGCATAGATAACTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.86%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.40,-1.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [71.7-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0 Confidence: HIGH] # Array family : NA // Array 1 9935-9322 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADFCA010000042.1 Moraxella sp. K1630 Contig_042, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 9934 36 100.0 29 .................................... ACAAAAAAACTTGATTTTACCGTTTAACT 9869 36 100.0 26 .................................... AAGTACTTTTAAGGTCTTAGGCGACT 9807 36 100.0 28 .................................... ACCTGTAAAATCAATGGAGAAAACCCAT 9743 36 100.0 26 .................................... AAAAGTACTTTTATAACCGCAGAAAA 9681 36 100.0 29 .................................... AGATATGACAGGAGAAAGATATGAGTCAA 9616 36 100.0 30 .................................... GCAATAATGTTTATGCGTGTGAAGTGATTG 9550 36 100.0 31 .................................... AATTAGGTATTGACAAGCCCCAAAAGGTTTG 9483 36 100.0 27 .................................... ACTATCATTATAGTCGTGGTTTTTGAA 9420 36 100.0 27 .................................... CAGCAGTGGTTAGAGAAATGGCAGGAC 9357 36 91.7 0 .................................TTG | ========== ====== ====== ====== ==================================== =============================== ================== 10 36 99.2 28 GTCTAACGACCTTTTAAATTTCTACTGTTTGTAGAT # Left flank : TGGTTTTGATGTTGCCAAATTTTGACATACAAGCAAATGGAGAAGATGTATGATAATCGTCAGTTATGACATCAGTGATAATAAAGTGCGTGGACGATTTGCCAAATTTTTAATGCAATATGGCGACAGGTTGCAATATTCGGTCTATGAAATTCAAAACAGCGAACGCATTTTAAACATCATCACCGAAAAAATAAAAGCAGAATTTGAGTCTTTATTTACAGGAGCGGATAGCGTCATTATCTTTCGGTTTACAGAACGTGAAGTATTAAGATTTGGTCATGCCAAACATCGTAATGAGGATTTGTTAATTTTATAAAAATCCTTGGCAAAAATGATGAGGTTTGTTATAATAAGAGATCTAAATCACACCCAAATGTTTACTTTACAAACCTAAGTCTTAATGTGTGATTTATCATGTTTTGGCGGTAAAAATGATGATTTTTTGTACAAAAAACTTGCTAATTTCTCAAAAAATCATTAAAAATACCCCAAAACGG # Right flank : GCGTTTAAGATGATTAACCCCACTGCCTGTCCCGAAACGCTACTGCCGTGTCTTTGGCTTTTTTGATGGCAAGTTTGCGGTTATGACTGGCGAAGAGCTTTAACTGCCACAGTTTTTCTTGGTATAAGGTCAGATGGTCGCTTGGGTGCATGCGATTGATAAGGCGTTTGCTCGCCAGTACCGCATCAGGTGAGCGAGTGGCAATCTCATCGGCTAGGGCTTTGGCACGTGTCATCGGTTCATCATCGAGATGGGTGATGAGTCCGTAGTCGTAAGCGGTCTGGGCATCAAGTAGGCGAGCGGACATGGCAAGCTCTTTTAGCTTATCCTTGCCGATGTCTTTGGCAAGACGGGTCAATCCCATGTCAGCGACCAATCCCCATTTGGCTTCAAGTACTGACCATGTCGCTGATGGGTGGCTGATACGTACATCCGCCCCCATGGCAAGCTGTAACCCCGCCCCAAGGCATACGCCATCGACCACGGCAATCACTGGTACA # Questionable array : NO Score: 3.14 # Score Detail : 1:0, 2:0, 3:0, 4:0.96, 5:0, 6:0.25, 7:-0.07, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTAACGACCTTTTAAATTTCTACTGTTTGTAGAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [48.3-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.68 Confidence: HIGH] # Array family : NA //