Array 1 29461-33296 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAFBEV010000020.1 Sporolactobacillus spathodeae strain DSM 100968 Ga0454072_20, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 29461 36 100.0 30 .................................... GAATTTGAAAATCATACGCTCACCATCTCA 29527 36 100.0 29 .................................... AATTGATTCATTGTTAAACCTCCTGAGTT 29592 36 100.0 30 .................................... CCAAACAAAGAGTACGAAAGCTATGATACA 29658 36 100.0 30 .................................... CGTGTATAGGGCGTGTCTGCGGCGCCTAAA 29724 36 100.0 30 .................................... AATCTCTTTATCATATTCAACATTCCAATG 29790 36 100.0 30 .................................... AAAAAGTGACGCGGCGACACACGTATGATT 29856 36 100.0 30 .................................... GCTGTTAGTGCAGCTACCGCAGTGATGACA 29922 36 100.0 30 .................................... GTCTTGTCATTAAGTTCTTCCTCCAAATCT 29988 36 100.0 30 .................................... AAGGAAACCTATGGGCAAAGGAAAAAGAGA 30054 36 100.0 30 .................................... AATTGATTATTGATGCAGCTTCAGGACTTG 30120 36 100.0 30 .................................... CAACTCGGCAGCTTATCGGCGCGCCCCTCT 30186 36 100.0 29 .................................... CACGATTTTGAAGGGTCGTCCTTGTTTTG 30251 36 100.0 30 .................................... CCAAGTTTACTTCAAACGGGAATGGGGCAT 30317 36 100.0 30 .................................... GCCTACTGTTTGGCTCCCGGCAGCAATACA 30383 36 100.0 30 .................................... GTAGTCTAATAACTTCTCTCCGTACATCGG 30449 36 100.0 30 .................................... TTCAACCAACATATTGTGCGTTGTTTCTGC 30515 36 100.0 30 .................................... TGGCAAGCGCAGGTACTCTTCTAACGTCTC 30581 36 100.0 30 .................................... TCACGAATGATTGGCATTCGCTATTTGGTA 30647 36 100.0 29 .................................... AGCAGTTATCAAGGTTGAACCATGGACTA 30712 36 100.0 30 .................................... CATTCTTTGCATCGATATGCCCCGTTTTCA 30778 36 100.0 30 .................................... GTATCCAATTCCGAATACAGATCGTTCAAA 30844 36 100.0 30 .................................... TATTTTACTTGATGATCTACCATGTGTAAA 30910 36 100.0 30 .................................... GCCCAGGTACTTCCAGTCGTAAATCCGTCC 30976 36 100.0 30 .................................... ATGCTGAACACTGGAAGGAATGCGCGTCAG 31042 36 100.0 30 .................................... TGAACATGAAATACGAAACGAGGTGCGCTA 31108 36 100.0 29 .................................... AAGAGAAGGACTCACCGCTGTAATATTTC 31173 36 100.0 30 .................................... CTTGTATTGCTTGTGAGCGCGCTTGTATTG 31239 36 100.0 30 .................................... TAATTCGCACGTGATTCCCGCAACCGCATT 31305 36 100.0 30 .................................... AAAGGCATTAAAACATTGCAGGGACGGTGA 31371 36 100.0 30 .................................... TGCGCGGTCTTTATTCCAAAATATTTATTA 31437 36 100.0 30 .................................... GTGATTGGTGATGGGGCGTTCGGTATTCCG 31503 36 100.0 30 .................................... ACTGAACTTAATTGACTTGATCTTTTTCGG 31569 36 100.0 30 .................................... TGAGTAAACCGCATGGATCTTTTTAACCTG 31635 36 100.0 30 .................................... CCCGTATGTGGCAACCATTTAACAAGCGAA 31701 36 100.0 30 .................................... AGATAGTTGGTGTATATGGTTCTATATCAT 31767 36 100.0 29 .................................... CTTAAATCCGCACTGTAATCATTAAACTT 31832 36 100.0 30 .................................... ATGAAGGTATGGAGTTAATTGAAGTAAAGA 31898 36 100.0 30 .................................... CGAAGTTTTGTGATAAATGCAATAAAAAAT 31964 36 100.0 30 .................................... CTCTTTTGTCGCATGGAATGATTTTCCGGC 32030 36 100.0 30 .................................... CGGGGGCGATACATGAATTTCCATAGATTC 32096 36 100.0 30 .................................... TTGGATTGTGTGCGATTTTCTCCCAAAATT 32162 36 100.0 29 .................................... CGATTTGTACGTGTCTAACCACAGTTTTT 32227 36 100.0 30 .................................... CATCTAATTGAAGATATTTACAATGATATT 32293 36 100.0 30 .................................... AAGCATATCGGCAGGCAGTCAGCAAGGTGC 32359 36 100.0 30 .................................... TGGCTAGGTCAAGCCAATAATACGGGATTA 32425 36 100.0 29 .................................... TTGTAGTGACGCCGATCAATGGCGATGGC 32490 36 100.0 29 .................................... CATCTTTTCATCTGACGACCTATTGAAGG 32555 36 100.0 29 .................................... TTCTTATGCATCAATGATCTCGCGGATGA 32620 36 100.0 30 .................................... TCAATGGGGTTTGCTACAACCTGTTCCAGA 32686 36 100.0 30 .................................... TCAATAAGAAATATAAACAAAAGACAATTA 32752 36 100.0 30 .................................... GCCGACAATAACCGTATGGCCAACCTTTCC 32818 36 100.0 30 .................................... TTAATGGACCCCGATCCAATATCAATGTAT 32884 36 100.0 29 .................................... CTGAGGCTGCGTTCTGCCATCGCCATCGG 32949 36 100.0 29 .................................... GAGTGCAGTTTGTTTTTACTCTTAATCTT 33014 36 100.0 30 .................................... ATAACTATGGCATCATCAAAGTAGAAGGAG 33080 33 83.3 12 .................C.G.A........-...-- CAAAAGCTCATG GG,T,T [33097,33106,33108] Deletion [33113] 33129 36 100.0 30 .................................... TATCACTGATCATTCGTTTTGCGATCTCTA 33195 36 97.2 30 ................C................... TGTGAGTGCGTGAATTGAAATATCACTGTT 33261 36 83.3 0 .........T.....A.......T..A.......AT | ========== ====== ====== ====== ==================================== ============================== ================== 59 36 99.4 30 ATCGTATCACATCAAGTTTTACAGGGGAAGTATGGC # Left flank : AACTTGTAAACATCAATACTCATACATATGAGTAAGTTCATGAGAATTCTCGTGTTTTTTGATCTGCCGGTTACTTCTATTCGTGAACGAAAAGCATATAGCCGCTTCCGTAAATTTCTATTAAAAGATGGGTATACAATGCTTCAGTTTTCTGTATATACGCGGATATGTAATGGCGAGGACGGCGTACAGAAACATATGAAACGTTTAAAGGATCATCTCCCGGGTGTGAATGGCGCTATACGCTCTATGAAAATAACAGAAAAACAGTTTGAAAATATGGATATTTTACTCGGAGAAGATACACCTGAGGAAAAATTAGGAGCAAATAAAACAGATTTTTTTTAGATCTAGGGGTTGCCTTTTTAGCGGCCACATTTTTTTTGCTAATAAAATGAAAAAAATTAAAGAAAACATCAAAAAACAGCGCATATTTGCACTGTTTTTTATAAGTAGAAATCCCTTGAAATGGGGATGTATCAAGGGATTCAGGGGCATGT # Right flank : TCAAGGGAAATTATGCCTGATCTAAGTGGCCAATGTACTACATCAAGCCTCGCTCCCCCTATTTTTTGCGATCATAAAAGCATTAAACTCCCCATCCCCCACCGACACTTATTACCAATTTATTAATCGCCTATCTTACCCAAAGTCTATTATGCTAAAATAAAAATAGCTGATTTGCCAAACAATACAAAATTATCTGAGGGATTATTTATGGACGTGACGCAGTTTCAGAAAATAAAAGAAGCGTCTTATCTGACGGCGGAAAATGCGGTTCGCTATCGGATCATTTTGCGCTTCTTTTATATTGAGCATGAGCGGATGAAGGATTTGCTTTATCCGGCAGATGTGTTTCGTTTCGTTCGGTCGGTCAAGGGCATGGAAGATTATACAGAAACGATGCTCGAGCAAGACTTAGCGACGCTCGTCAGTTGGAAGAATATCATCCCGCGGCAAGAGATGAAGGAACCGAAATCGATCGAAGAGTATAAGCGGAAGAGGTT # Questionable array : NO Score: 3.20 # Score Detail : 1:0, 2:0, 3:0, 4:0.97, 5:0, 6:0.25, 7:-0.02, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATCGTATCACATCAAGTTTTACAGGGGAAGTATGGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-15] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [61.7-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.68,0 Confidence: HIGH] # Array family : NA //