Array 1 1079940-1082036 **** Predicted by CRISPRDetect 2.4 *** >NZ_UGSE01000002.1 Oligella urethralis strain NCTC11008, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =================================== ================== 1079940 36 100.0 33 .................................... GGCCAGCGCGCTAGCGATTTGACCTTCCGCTGC 1080009 36 100.0 31 .................................... GCAGAAGTTTTAATCTTCTCATTCTTGATTT 1080076 36 100.0 33 .................................... CTGCTTTACCCGCCTTATAGGCAAGTGCAGAGG 1080145 36 100.0 32 .................................... AGCGCAGAGGCTACCTGTGCCTCAGCCACACA 1080213 36 100.0 34 .................................... GCTGCTTGAGCCAAGGACCGGTAGATACTGAGGA 1080283 36 100.0 33 .................................... AAGGTGCGGTAAACACTCATAACTCCATATTTC 1080352 36 100.0 33 .................................... CCGACGGTTTTCCCCTGAATGCGGAGATTTAAG 1080421 36 100.0 35 .................................... TCTCAGCCTCTACAGCCTTAGCCGCCTTATAGGCA 1080492 36 100.0 34 .................................... TCTCTAACTCACCAATGGTTAGAGTTACCCAACC 1080562 36 100.0 31 .................................... AGCAAGGTTAGCCTTTATTTCATCACGTTCT 1080629 36 100.0 32 .................................... CTTTGCCATCTACCTGATCCCATTGATCACCT 1080697 36 100.0 33 .................................... ATAAGCTACTACGATCTCTTGTTCCCGTTCTTC 1080766 36 100.0 34 .................................... GCTTCTTAACCCCTTGCTAATTCGCCCCATTCTT 1080836 36 100.0 33 .................................... ATGAAGGTGGATAATCCTGATGATCTGGATGGC 1080905 36 100.0 30 .................................... GACATACGTAGCCGCCTTAGCTAAGGTGCG 1080971 36 100.0 34 .................................... GTTTGATTTGTCAGGCTTAGCCGAACGTAAATAG 1081041 36 100.0 33 .................................... TAATGCTGATTCTGCAGCTTTTCTCACTCTTCC 1081110 36 100.0 34 .................................... AGGCAACCGCAGTAGCCACTTGGGCCTCTGCTGC 1081180 36 100.0 33 .................................... AGCTTCCTAGAGCTATTTACTAACTAACTCTAA 1081249 36 100.0 33 .................................... AAAAGAAGTAAGCGGGAGAGGCGCTCCTTTACG 1081318 36 100.0 34 .................................... TCAAGGACACTTGTCAAATCAGCTTCCGGATTAT 1081388 36 100.0 32 .................................... CAGCTTTGTAGAAAGATAAGATTCCATATTTC 1081456 36 100.0 33 .................................... ACTTTATGTGCTTTATAGGCAACCGCAGTAGCC 1081525 36 100.0 33 .................................... ATTATTGGAAAGGTACTCAAACAAAGAGTTTTG 1081594 36 100.0 34 .................................... GAAGTTCCCAAGTGTACATACCATCACAATCATA 1081664 36 100.0 31 .................................... GGCAGAAGATTTAATCCTTTCGGATTTTAAT 1081731 36 100.0 32 .................................... TTTTTAGGTTTCATTTCTTTTGGCATTTTCCG 1081799 36 100.0 32 .................................... TTGAGTGGGATAGCCCCAATGGAGCGCCCTTG 1081867 36 97.2 31 ................................T... AGCTTCATCTAATTAATATGCTGGATTACTC 1081934 36 88.9 32 ............G.T...C...A............. CTCAAAAGTCTGAATGTCAGACTTTTAAGACG 1082002 35 72.2 0 .AT....C..C.C.TT..C...A......-...... | ========== ====== ====== ====== ==================================== =================================== ================== 31 36 98.7 33 GTCTGAGGTAATTCCCTGATTTGAAGGGATTAAGAC # Left flank : ATAAACGTAATATTGAGGTATATGGACTAAAGATAGATAGTAGATGTTATTGATTTTACTTACATATTGACTCAATCTATAAGAGAGGATGTATTACGTATTATTATTTAGGCTTCAATTAGATGTTCGTTGATTGAGGAATTTTTTGATGTGATGTGTGGTTTTTTTTACCCTAATTTGGTGTTTTTATAAGAACTATCATTAGGGTGGTGTTTGTGGAAAGGGTGAGTTTAGCTTCAGGTGCAGCCTTATTTTATGCGGCTTGAGGCAAAGTTTATTCGAAATTAAAAAAGAATGAAAGCCAGTAAAAGTATTGTTATAATATGGCATTACCTCAGGCAGAAGGATGATGCGAATTTTCCCTGTTTTAAAGGGTATTTTAGGTGAAAAGCAATGCCTCAGATTTTGCTCAATAAATACACAACTTTTTTCGATGATTTTTTGACAAAGTTTTTTGACTGTAAGTCATTGAAAGAAAAGGATGTTATTTTTAGGGTGGA # Right flank : CTGACACCAAGAGCGGATGGGATTGTGGGTATTTGTTGCAAAGCAAAGCAAAGCAAGCGATTGATGTTCTTTGGCGAGCGTATCGACAATCCTTCCCATGTTGAACTATGATGAGAACAACTTGTATCTGCTCAGCCAATTTCATCTCGAAGCACTTGGTCTAAATTGTGCTGCGTAGTCAAGACCAGACATAGCTTAGCCAGATATTTTTTCAATCATCTTTCGAACCAGCACGCTTGCAGGAATCCATTCTGAGCCGACAGGACGATCTTTCTTTTGACTGTGCGCTTTATAAGCGTAAAATTTCGCCACTCGGGTTGTGCAAGGCACACATCACAACACTATCGCATCAGCTGGTACGTACTTCTGAACACGTATTATGAGTAACACTTATTTTTTTGCTAAAGACTTCTATGGCTGAACCCTGTTTATTAAACAGGTTGATGGTCATCACCATATCCTGAGTTAACATAAGCGGCCTGAAAAACCGCTAGTTTAAA # Questionable array : NO Score: 3.23 # Score Detail : 1:0, 2:0, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTGAGGTAATTCCCTGATTTGAAGGGATTAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-6.90,-5.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [70.0-60.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0 Confidence: HIGH] # Array family : NA //