Array 1 745901-745476 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_JAHLGW010000014.1 Streptococcus equi subsp. zooepidemicus strain SEZ_19-047 tig00000235, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence           	Spacer_Sequence                          	Insertion/Deletion
==========	======	======	======	==========================	=========================================	==================
    745900	    26	 100.0	    40	..........................	AGAAGCTAATCCAAGAGATTTAAGCATATTAGACGTCTCG 	
    745834	    26	 100.0	    41	..........................	AGCTGTTGGTGGACGACCGTAACGTTTCTCAAAGTGTCTCG	
    745767	    26	 100.0	    39	..........................	TCCTCTGAACAGAACCCCATAAATAATACCTAGGTCTCG  	
    745702	    26	 100.0	    41	..........................	TGATGAAGCTGCTACAAAGCGTAAGGAGGAGTTAGGTCTCG	
    745635	    26	  88.5	    41	...TT.G...................	TTTGGCATGCCTCACATCAGACTCATGTCTAGCATGTCTCG	
    745568	    26	  88.5	    41	...TT.G...................	CCGACACTGCGAACTAATCATTTGTGACTCCTTTCGTCTCG	
    745501	    26	  88.5	     0	...TT.G...................	|                                        	
==========	======	======	======	==========================	=========================================	==================
         7	    26	  95.1	    41	CCCCATACGGGCGAGTGGATTGAAAT	                                         	       

# Left flank :   TACCAGTCGCATGGATACCCTAAAAAATGGTGCACTGTTAGTATTGGAAAATTTATAAACATGGAGAAAAAGATGAAAACAATAATACGTGAGCTATTGGTTGAGGATGTTAAAGGAGATGCTGAGGTTGCTTATACCTTACTAGCTTCTGAGCATTCTCTTTTTGTTCCTTCCAAATTGGAGCAGGCTTCCGACAAGCTGATTCTAGAGGCTAGCCTTGATGACGTGTATGACTGGTCAGCCCTAGAGACGATGATCGTTGAGGAAAAGCTAAGGCATTTGCTAAATCTTAGCGAGCTGTTTGATCAGCTCTCAGACTCAAAGTTCACCTACAGCTTTACACCAGATAATCTGGTCTTTAACCGTAATGCAGAGCCGCGTTTGATCTTTCGAGGGATCAAGGATCAGGTTCCTCCTTACCAGCCGCTTGAGCCTGAGGCCTTTGTGGGTACATTGAAATTTACCAGAGTAGTAATTTGGTAAGAAATAGCGACGTCTCG
# Right flank :  TTTGCTGCTATGCAAGGAGTGACACTGATTGAAGTCGCTCTCTTCTCGAGGGCGTGGTCCGTATCCCTGGTACTTTTCATGAAGGGATAAATCATATCACATTAATCAAGTTGATTTAAGTTTTTTATGGTACTATGTCAAATAGATAAAAATCTCTGTGTCAAGTGTAGTGGGTGACTGATAACTAAGCACGAGAGGAGACGAAGGTCGCCTTCTCTTTTATGATGTTCAAAGCAAGGTAAATACTTTTCTTGAAGTTGTCAACGTTTCTGAATCCAAAAGCATTGCGCTTGATACCTTTGATAAATTTGTTAGTTGCTTCAAGCTTGGCGTTAGAATAAGGCAGTTCAATGGCATTGATGATATAGTCGTTATAGCGTATAAAGGTGTTTAAAGTCGTTTTGAAGGTGTGATTGAGATGAGGCAAAGCATCTTGACTTAACCCAAAGAAGAGCTCTGTCTTCTTTTCTTGCAAGTGAAAAAGAAGTCATTGGTACAGA

# Questionable array : NO	 Score: 9.01
# 	Score Detail : 1:0, 2:3, 3:3, 4:0.75, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     CCCCATACGGGCGAGTGGATTGAAAT
# Alternate repeat :   GTCTCGCCCTTTGCGGGCGAGTGGATTGAAAT

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         R Score: 4.5/4.5
# 	A,T distribution in repeat prediction:     NA [7,7] Score: 0.37/0.37
# 	Reference repeat match prediction:         R [matched CCCCATACGGGCGAGTGGATTGAAAT with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-7.80,-6.80] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [0-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: R [46.7-61.7]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0.37,9.68   Confidence: HIGH] 

# Array family : I-C [Matched known repeat from this family],   
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