Array 1 1988316-1987092 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_AP019695.1 Amedibacterium intestinale strain N6H1-5 chromosome, complete genome		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence               	Insertion/Deletion
==========	======	======	======	====================================	==============================	==================
   1988315	    36	 100.0	    30	....................................	CATCTGCACCTTGACTATGTACCGTTCATC	
   1988249	    36	 100.0	    30	....................................	TCACAGGGTAATGCTGAAAAGCTTACATCA	
   1988183	    36	 100.0	    30	....................................	TGTTTTCCAGTGAATGATGGAGAAGTAAGA	
   1988117	    36	 100.0	    30	....................................	ACGTTGTTGGAAAAATAAACCTAATGATTT	
   1988051	    36	 100.0	    30	....................................	GTTAAACCTCAACCAACCGAACAGGATTTG	
   1987985	    36	 100.0	    30	....................................	AAATAGAATTAACTGCTTTTCCATACGACA	
   1987919	    36	 100.0	    30	....................................	CACGAAGTCTTCAAAGACGGATTACATTCG	
   1987853	    36	 100.0	    30	....................................	TGCAGAAAAGAAAATAAACATTTTAAGAGA	
   1987787	    36	 100.0	    30	....................................	ACTTAAGTAGATATAGAGAGTGTCTTTGCA	
   1987721	    36	 100.0	    30	....................................	AGTTCAAACGCAAATAAGCGAGTTGAAGCA	
   1987655	    36	 100.0	    30	....................................	TGGGTCGTATAGACCCTCAAAAATGGCAGA	
   1987589	    36	 100.0	    30	....................................	TCTAGCTTTGTTTCAAATAGTAATGTTCCA	
   1987523	    36	 100.0	    30	....................................	TCAATCAAGTTGATTAAGTCGTTGATTCGA	
   1987457	    36	 100.0	    30	....................................	TACCAACGAAGAATTTCAGCACATACTCGA	
   1987391	    36	 100.0	    30	....................................	GAACGAATGTTTAAAGAGAGCGGATTTCCT	
   1987325	    36	 100.0	    30	....................................	TAGGCTCCTGCGTCTACGTTCATCGTAACG	
   1987259	    36	 100.0	    30	....................................	TGTTACCTTTACATATTCCCCTTTATCATA	
   1987193	    36	 100.0	    30	....................................	GATTACAGGAAACAGGGACAGTTTGAATGG	
   1987127	    36	 100.0	     0	....................................	|                             	
==========	======	======	======	====================================	==============================	==================
        19	    36	 100.0	    30	GTTTTGTTACCATATGGATTTTTGCTAGAATGAAAC	                              	       

# Left flank :   AAAAATCCTTGAAGCATATTTTAGTGATGATTTTCAAAAAGATGAATTTGATTTGAGTTATGAAGATGTTATTTTGTTTCAAATTCATTTGATAAATGAAATTATTGCTCATACAGAGGATAAAGATATGATTATTGTATCGGTAAATATTCCAATTATAACAGATACTATTATTGAAGAAATGAAAAGTACTGGACATAGTTTTTTCTTTATCTTCACGAACAATTATTGTGAAAAAATGAAACTTGATGAAGTTATATTATCAGAGGAAGAATTATATGATTTGGCAGATATAAATTATATATTTTACGAAATAGAGGAAACATATAATGAAATACAGCAAGTGGAGGTATTAAAAGAAAATATGAAAAAGTTTGTGAAATTGAATTATACATATAAGGCATTCAATGTTATCGATGAACTGACACATTTTTCTAATAAGTAGCGAATCGAATAGGTAGTAATTCTCAAATTACATAAAATATGTTATGATATTTGAG
# Right flank :  TGACGTCCTTGTCGTATTTGCCCTGCAGAGAGGTATACTCCTTTTTATATTTAGTGACTTCTGCCTGTAGCTTTTCGTTTGATCCGTTGTCTTTTTTCAATGTGTCAATTGTGATGTTACCGAATAAAAAGGGAGCTGTTTAGCTCCCTGTAGGCTTATAGCCTTTTTTATCCAACTTTTTCATTAGGAAAGCCTTGCCGACTTCTTCGTCGATTTTGCTTTCAAGCCACTTACGTTTAGTGAGTATTTTTTTCAAGGACTTTTTCTAATTCTTCTGCCTTGTCCTTGCCTATCTCGACATAAAAAGCTTTTTTTCTTTTTTTCGTTCCCTCATTATGAATGCCTGCATATTTCTCTTTAAGCCTCGGTAGGAGTACCGGCCCTACATCTCTTTTAGGAAGTGACGGAAGTACATTATCTCCGTCCTCGAGGCATATTTTATCAATACATTTGTGAATACCAGAATGACGGTCCTATATTCTTCTCTGTTTCTTCGTCCA

# Questionable array : NO	 Score: 6.26
# 	Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTTGTTACCATATGGATTTTTGCTAGAATGAAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:69.44%AT]
# 	Reference repeat match prediction:         R [matched GTTTTGTTACCATATGATTTTTTGCTAGAATAAGAC with 94% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  NA [0.00,-0.30] Score: 0/0.37
# 	Array degeneracy analysis prediction:      NA [0-0] Score: 0/0.41
# 	AT richness analysis in flanks prediction: R [60.0-73.3]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0,4.77   Confidence: HIGH] 

# Array family : II-A [Matched known repeat from this family],   
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