Array 1 197550-194996 **** Predicted by CRISPRDetect 2.4 *** >NZ_LR134346.1 Taylorella equigenitalis ATCC 35865 strain NCTC 11184 chromosome 1, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 197549 32 100.0 34 ................................ ATTATCTATCCACCTTAACTTCAACCATTTCGGT 197483 32 100.0 35 ................................ TATACATTTTGCGAGACTATTTTAATTGTTAACTC 197416 32 100.0 34 ................................ GCTTGAATAGATTCGGGCTGTCTGATTAATTCTC 197350 32 100.0 34 ................................ GATGAGCTCATCAATCGATTTCACGGTCATCTAT 197284 32 100.0 35 ................................ TGCAAGTAATTCACACGCCTTAACTTTTATGACAT 197217 32 100.0 34 ................................ CTGAGATTAAAAACTTGTTAGTTGAAAATAATAT 197151 32 100.0 35 ................................ GGCTAATGTCGCGGAAATGCTAGCACCTGCTTGAT 197084 32 100.0 34 ................................ GGAACGTTCGAAACTACAGCATCAAGGGAACCCT 197018 32 100.0 34 ................................ CTGAGATTAAAAACTTGTTAGTTGAAAATAATAT 196952 32 100.0 35 ................................ GGCTAATGTCGCGGAAATGCTAGCACCTGCTTGAT 196885 32 100.0 35 ................................ ACGTGACAATATGAGCACGGTTGCTGATTGGTTCG 196818 32 100.0 36 ................................ AACAGAGTCCATTAGAGGATTTGCAGATGAATCAAG 196750 32 100.0 34 ................................ GACGAGAGTCTAACTAAGACACCAATCGCAAGGT 196684 32 100.0 34 ................................ CAAGATTCATTAACAGAGCTATTTCAGCTTACAA 196618 32 100.0 34 ................................ CCCGCTGGAAAACAGCTTATCAAGTATGGCTCGA 196552 32 100.0 34 ................................ ATGTCCAAGTAGACCTTAGTGCGACGGTCCATAA 196486 32 100.0 35 ................................ CGCAAATAATCGAATGGGTACACCGTAAAACTTGG 196419 32 100.0 35 ................................ TTAATTAAGTAAAAGGACAAAAAAAATGAATCAAG 196352 32 100.0 34 ................................ GACGAGAGTCTAACTAAGACACCAATCGCAAGGT 196286 32 100.0 34 ................................ CAAGATTCATTAACAGAGCTATTTCAGCTTACAA 196220 32 100.0 34 ................................ CCCGCTGGAAAACAGCTTATCAAGTATGGCTCGA 196154 32 100.0 34 ................................ ATGTCCAAGTAGACCTTAGTGCGACGGTCCATAA 196088 32 100.0 35 ................................ CGCAAATAATCGAATGGGTACACCGTAAAACTTGG 196021 32 100.0 35 ................................ TTAATTAAGTAAAAGGACAAAAAAAATGAATCAAG 195954 32 100.0 35 ................................ GAAGTTTCGACTGGATACGCTTGCAAATTAACAGA 195887 32 100.0 35 ................................ GAAGTTTCGACTGGATACGCTTGCAAATTAACAGA 195820 32 100.0 34 ................................ GAACGTCACCAACTTTACGATTGCTTAAAGGTCG 195754 32 100.0 35 ................................ CTATGGCAATTAATGCCACTTCATTTTTTATGCAA 195687 32 100.0 34 ................................ GATTGTGTAATCTCGTCCAACAATATACTTCATT 195621 32 100.0 34 ................................ TTTTCTCAATCATCGCTTGTGTAACCCCAAATTC 195555 32 100.0 34 ................................ GTAAAAAACATCGAATAGAAAAAGCACTAATTGG 195489 32 100.0 33 ................................ TCTGCCGAAACTATACGGTCACCACCGAACCAG 195424 32 100.0 34 ................................ TAACTGGAAGGACGGGTTGAATGGCACTTACTGA 195358 32 100.0 34 ................................ TTTTCTCAATCATCGCTTGTGTAACCCCAAATTC 195292 32 100.0 34 ................................ GTAAAAAACATCGAATAGAAAAAGCACTAATTGG 195226 32 100.0 33 ................................ TCTGCCGAAACTATACGGTCACCACCGAACCAG 195161 32 100.0 34 ................................ TAACTGGAAGGACGGGTTGAATGGCACTTACTGA 195095 32 100.0 36 ................................ TTCTAAACTACTTATTCGGAAGTAAACTTCAAAAGT 195027 32 87.5 0 ....T.....T...T..A.............. | ========== ====== ====== ====== ================================ ==================================== ================== 39 32 99.7 34 TCAGCCACGTACGCGTGGCTGTGTGTTTAAAC # Left flank : ACAAGAATATCCTCCCTTCTTAATGAGGTAAACATGTTAGTACTTATTACTTATGATGTAGATATGAAAGACAATTCAGGTGCTAAAAGAATGAGAAAAATTTCGAATGCCTGTCAAAACTTCGGACTTAGAGTTCAATACTCGGTGTTTGAATGTGATATAGACCCAGAAAAGTGGATAAAATTAAAGAGTACTTTGCTTGATTTATACGCCCCTGAAAAGGATAGTTTGAGATTTTACAATTTGGGAAGTAAATGGCGGGGAAAGGTTGAGCATCACGGTGCAAAACCTTCGATAGATATTTTCAAGGATCCTTTAATTCTTTAACGCTAACCACTAGTTGACATTAGACTAAGATAAGATTAGCGATACTTTTGTTCTTTAAAAATCAAATAGTTTTTGAACTTTTGCTAAAGTTCTAATTTGAATCCTTATCACTTTAATAGCTTAGCGATTATAAGCTTTAAGAATAAGTACTAAAGCCATTTATAATGATGGCT # Right flank : GACAGATTAAGAAATGAGTTATAGTTGAATCTATAACTGTCAAGTCTACTTGTTTTAAAAGCTTAACTAGTATCCCATGTATCCATTCTCACATTAAATGCAATATACTCAACTAGCTTTGTTTTTAAGTATATTTATCAATACTGTTACAACACTAACAGGCAAAAATTCAAAGTAGCTTCTAAATCCTAAATCGATTTTAAAATCGAATTTTGTTTTACATAGAAAATCCTTATTTTTAATCACTTTCTGGAAATAAAATTTCTTTATTATTTATAAGTATTTTTTTCTATCGATTACTAAATTGAAATTGGGATTAACCTTTTATTTACCTAGGCTCTGGGTAAGTATTAAAATTAACCTCTTGCTTGCAAAAAAGTAAGTGTGTTTAAACAATTTTTAATTGACTTTAATCTGAGTCGTGCAGCCTTAGGGCTGCACATCCATTTTTAGGAAATCATATAAATGTTTATAGCACATACTCGGACTCTAGACTCTGT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TCAGCCACGTACGCGTGGCTGTGTGTTTAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [9,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GCAGCCACGTTCGCGTGGCTGTGAGTTGAAAC with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.90,-3.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //