Array 1 84899-85112 **** Predicted by CRISPRDetect 2.4 *** >NZ_JONS01000006.1 Actinomyces israelii DSM 43320 O145DRAFT_scaffold00006.6_C, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 84899 29 100.0 32 ............................. AGGTTTCCGTCGGGGTTGGAGTAGGAGAGCTG 84960 29 100.0 32 ............................. GCCGCCCAGGTCATCGCGGCCGGCAACGCCGC 85021 29 100.0 32 ............................. GTGCTGAAGGTGTTCGGCGGTGCCCTGGCTGC 85082 29 86.2 0 ............CA.........T....G | C,G [85098,85106] ========== ====== ====== ====== ============================= ================================ ================== 4 29 96.5 32 GTTTGCCCCGCGTGCGCGGGGGTAGAGGC # Left flank : CTGCCGCTCTTCGGGGAGGTCGGACGACGAAGGGCGCCCGTGCTGCGCGGGTTCGTGCTGCAGGCGGGTGGAGTACCGGGCGAGATCACTCTGGCCGTGCGCAGTGGTGTTGTGAAGGTGCGGCCCTCAGAGCTGCGCGAGCTGGCCTCGCTGCCGAGGGTGGTGCGCGCTGCGACCGCGCCGACGTCGGCATGGACCTCGATCGTGCCCGTCGAGATGGAGTCGGAGGTTGCGGTCGAGCGGGTACGAGCGCTTGCGGACCGGCTGGGTGTGCGCCTGGTATGGGTGGGGCGTCATGCGCAGGCGCGAGCATCGGTCGGGCTTGATGCGTGCGAGCCGGGCGGCGCCGCTCACCTCACGGTCGTCTTCGATGAGGCTGTTGCCGGCCCAGTGGTCTTGGACGGCGTGTGTCTCGTTCCGGAGGAAGCCAGCGGGTTGGCAGTGAATGAGAAGCGAGGCGCGCGGGAGTAAGATCCCGCTGTATTGTACGGTTTCGCACG # Right flank : GCGCTCTCGTGGTCTCCGGTCGGGAGCGACAGAGTGTTGCGGTTGCGGTGGGGGCATGGCTGGGAGTGCGCCCCGCCGCGCCCTCTTCTCGCTTACTACGCTCCTTTGTTCCTTACTGTACGAGGAAAAGGAGCGTAGTAAGGAACAAAAGGGCGTAGTAAGCGATCGGCGGGGCCTACGGGTCGAGGAGGCCGAGCGCGCCTGGCGCGCTGCCGCTGACACCTCGCGCCATGCCGTAAGCGTCCTGCGCAGTCAGGGCCTCACCGTCCAGGACATCGCGACTCCGGGCGAACGTCCAGCGGCCCCACCCGGCCCGCCGGACGCGGCCTGCCCCGTGAGACGGCGCGGCTGCCCGCCCTGTGCACGGGTTATCGTGAGACATGCGCGTGTACAACTTCTCCGCCGGTCCCGCCCAGCTCCCCCTGCCCGTCCTCGAGCGGGCCGCCTCCGAACTCACAGACTGGCGGGGCTCCGGCATGAGCGTGCTCGAGGTCTCCCAC # Questionable array : NO Score: 2.68 # Score Detail : 1:0, 2:0, 3:0, 4:0.82, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGCCCCGCGTGCGCGGGGGTAGAGGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [43.3-30.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0.37 Confidence: MEDIUM] # Array family : NA // Array 1 53909-51991 **** Predicted by CRISPRDetect 2.4 *** >NZ_KL544003.1 Actinomyces israelii DSM 43320 O145DRAFT_scaffold00007.7, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 53908 29 100.0 32 ............................. GACCAGCACCTCCAAGATGCCGCCGTCAACAA 53847 29 96.6 32 ............................G CGGGCGATGGCGGCCGCTTATAACGGGTACAG 53786 29 100.0 32 ............................. TTAATGATGAGCGGCTCTGGTTTTTATGGACG 53725 29 100.0 32 ............................. GAGATCGTCTGGGTTCGCGTAGGTCTCCATAT 53664 29 96.6 32 ............................G GCGACGCGTCGGAACTCTATGTACCGCTACCT 53603 29 100.0 32 ............................. AATGGGAACTCGCATCATTCCAGCCATTCGGG 53542 29 96.6 32 ............................G GATATCCGCGCACCCACATGGACCCCTCGCAC 53481 29 100.0 31 ............................. ATGGGCGCCCATCTGATGTCGATTATTCATG 53421 29 96.6 32 ............................G GAAATCCGCGCACCCACATGGACCCCTCGCAC 53360 29 100.0 31 ............................. ATGGGCGCCCATCTGATGTCGATTATTCATG 53300 29 96.6 32 ............................G ACAATAACCTTGAGGTGACGCAGTGGAGCCAC 53239 29 100.0 32 ............................. TTCCACAACCTCATGCCCAATAATTGCGTCCC 53178 29 100.0 32 ............................. CTCATTACCCATATAAAGTCACTTCTTCTCGT 53117 29 96.6 32 ............................G AGTAGGAGAATAGTGGAGTAGTGTCAAGAGGA 53056 29 96.6 32 ............................T GACAAGGCTGCTGCCGCTCAGTGGCCGAATAC 52995 29 96.6 32 ............................T ATCACCCATACCCGGCACAGGCGTACCACCAA 52934 29 96.6 32 ............................T TACGGCCAGAAGTACCTGACGTGCCCTGAGGG 52873 29 100.0 32 ............................. GGAGGCTTCTGGCACGAGCACTGCGCTGACCT 52812 29 100.0 32 ............................. CCAAGGATTATGTTCACCATTAATCGGCACAA 52751 29 100.0 32 ............................. CAGAACGCAGAGCGCCTCAAGGCCATCCAGGA 52690 29 96.6 32 ............................T ATCACTCACTCGCTGTCGGAGTCCGGAGACTG 52629 29 96.6 32 ............................G GCGGTTAAGCGCGTGAAAGGGGACAGGAAGTG 52568 29 96.6 32 ............................G GCATGGCGTCGCGGGACAGAATCCTGCCGGCG 52507 29 96.6 32 ............................T CGCCCGCTCCATCACCAGCGCCGTGATGAACC 52446 29 96.6 32 ............................G GGCGAAAAAGGCGCCGACGGCATCGACGGCGA 52385 29 100.0 32 ............................. TTGGAGAGGAGGTCGTAGGCCCTCCCTTGGGT 52324 29 96.6 32 ............................G GTTCTGGATATTGGTTCTATGACGCGTATTGG 52263 29 96.6 32 ............................G TCAAGGAACCTGGTGACCTCATCGGGCAGGTA 52202 29 96.6 32 ............................G CATTCGTCATGTCGGTCGCGGTCTGGGCCTGC 52141 29 100.0 32 ............................. AGAACCCCGAGCAGTCCGTCACACCTGTCTGA 52080 29 100.0 32 ............................. TCACCCGGCCGTGGATTCTTCTTCACCCAGAC 52019 29 96.6 0 ............................G | ========== ====== ====== ====== ============================= ================================ ================== 32 29 98.1 32 GTAAACCCCGCGCGAGCGGGGATGATCCC # Left flank : GCGGAACGCTGTTGCCGGTGGCTCGAACTACGCCGGAGAGGACGTGGGAGGATGGTAGTGCTGATCCTTTCGGCCGCCCCAGCCTCCTTGCGCGGCTCCATGACCCGCTGGCTGCTCGAGGTCTCCCCCGGAGTCTTCGTCGGGCGCCTTTCGGCCCGCGTGCGCGAGCAACTGTGGGAGCTGGTCCGCGCCTACATCGGCGAGGGGCGCGCCCTGCTGATCTGGTCGGTGCGCTCCGAGCAGCGCTTCGCGATCGCGTCGCTGGGGCATGAGCGCGAGCCGGTCGACGTTGAGGGCTGCCTGGTCATGCGCACGCCATACCGGCAGATCGAAGGATCACGGGCGATCCCCGGTGCCGTCAAGCCGCCGAAGGAGTCATGGTCGATCGCCGCTCGACGGCGGCGCTACCGCAACGCCTCCGAGCGGGCGCTAGGTCAGCAGTGAAGGCGGAAGCCGTCTGGTAGGGTGGACGATCGTTGGGATTCCAAGGATCGCCAAGT # Right flank : CGGGTCAACGACAACCTTGATGTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN # Questionable array : NO Score: 5.79 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.63, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTAAACCCCGCGCGAGCGGGGATGATCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCCCCGCGCGAGCGGGGATGATCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [18.3-41.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.51 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //