Array 1 165397-167554 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP062952.1 Bifidobacterium longum subsp. infantis strain JCM 11660 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================= ================== 165397 36 100.0 28 .................................... ACTCCTGTTGCGGCCACGCCGTCCATGA 165461 36 100.0 29 .................................... GGGTACACGACTCACACCGTAATGTATGA 165526 36 100.0 28 .................................... GAGATATCACGGCCCTTGCGACACAACC 165590 36 100.0 29 .................................... AAATCGGTGACGGTGACGAGCTGCGGCGC 165655 36 100.0 28 .................................... TCTCCTTCTTGTAGGATTTCGTTTGCTT 165719 36 100.0 28 .................................... ATTATGCGATCAATAATGATTTCAGGGA 165783 36 100.0 28 .................................... TCGTCTTCGGTGCCCACTCGCGTGCAGC 165847 36 100.0 29 .................................... ATTCATGACGCTTCGGGTGCTGTTGCCGT 165912 36 100.0 29 .................................... GTGAGCTTGTCCGTGTCTTTCATCAGTGG 165977 36 100.0 28 .................................... TGTTTACGCTCAAAAAGCACATTAGATT 166041 36 100.0 28 .................................... TGTTTACGCTCAAAAAGCACATTAGATT 166105 36 100.0 28 .................................... CCGAGGCCGGTAGGGTTGCGTGTCTGGT 166169 36 100.0 28 .................................... GTTGTAATCGGTCATAATAGTTTTCAAT 166233 36 100.0 28 .................................... TCTCCCAGTTGCTGCCCCTTGGCGTCGA 166297 36 100.0 28 .................................... CGTATTCATCGTGGCCTCTTCGCGGTTT 166361 36 100.0 28 .................................... CGTACATGATGGGGTCCTTGACCTTGTA 166425 36 100.0 28 .................................... TTGGTGGTGTTGGGCGTCCGGCGCAGAA 166489 36 100.0 28 .................................... ACAGTATTATTGTCCTGATATTCATGTC 166553 36 100.0 29 .................................... TCGTCGTCCATCTCTGTACCTCGGTTTCT 166618 36 100.0 28 .................................... TCCATGACCGCGTCCATCACCTCATGCC 166682 36 100.0 28 .................................... CGTTCCCCAGTGGGGTGAGTGTGATGCC 166746 36 100.0 29 .................................... ACCGATTGCAACGCGAATATCCCGGGTAT 166811 36 100.0 28 .................................... GTTGTTCCGGGAACAACTGGGAACAACT 166875 36 100.0 28 .................................... CTTGCCTCCGTTCTGCATCCAGCTGTCG 166939 36 100.0 29 .................................... ACGCGGCGAAGAATCTTGTTATCGCGGCT 167004 36 100.0 29 .................................... GTCGCACGTGGCATGGCATGTTGGCGAAC 167069 36 100.0 29 .................................... TGTTGAGGGGAACCGTATCAAACCTGATT 167134 36 100.0 28 .................................... TGGTTTCCGTGCCGCATTGGTCGCAGTA 167198 36 100.0 29 .................................... TCATGGGACTGTGAGCGGCGGCGGCGTGA 167263 36 100.0 28 .................................... TAGAAGTGCAGATTCCGTTCCTGCAAAC 167327 36 100.0 28 .................................... AGGACGTGCAACGCAAGTATTTCAAGAT 167391 36 100.0 28 .................................... TCGTCGATGTGTTCCAAGAGGTTTGGTG 167455 36 100.0 28 .................................... TATTGTTCGGGTGCGATGGTGATGATCA 167519 36 86.1 0 ..............................TTG.AT | ========== ====== ====== ====== ==================================== ============================= ================== 34 36 99.6 28 CAAGCTTATCAAGAAGGGTGAATGCTAATTCCCAGC # Left flank : ATTCAACGGTTCCGGTTTGACTATACCGAGCTCATTGAATGATTTTGCGCAGCAATTTGGTTTATATTGCGAAGGCAAAATCGACAGGTTGCAGGTTCCCGAATATGTAGGCGAGTCATGAAACGCGATGAGGACAGTGGCGGCATGTGGTGCTTGGTGATGTTTGATTTGCCGGTCAAGACAAAACGGCAACGGCATGCTGCAACTGTCTTTAGAAATATGTTGCTCGACATGGGATATGGAATGGTGCAGTATTCCGTATATGTGCGGTATACGCCTACGCAATCGGGTAATAGGGCGACGGTCAAAATGATTAAAGACAATCTGCCAGCTAATGGCTTAGTTAGAATTTTGCATATTAGCGATCATCAGTGGTCCACGGCGGCCCGATTTTCTTCTGGAAAACGTGAGATTGAGGAAGAAACGCCTGACTTTCTCACGCTTTTTTGAACGTAGGAGAGTCTGAAAAGATTGAAAAATAGCCCTTCTTGATAGGCTAT # Right flank : TGCTGGAATGCTTGGGTTGATTTGGCTGATTTAGCTGTGATGGCCGCTGCGGGAATGGCCCTTGCGCGGTTGGCGGCAGAGGTTGCGGCGCGGATTGCGGCACTGATTGTTGTGCCAATTGCGTCTGCGGTGAAAAATATGGCGACGGCTGTGTCTGACTGTTTATCGGCGGATGTTCCGGCTCAGGTTGTGGCTGGAATGGAGAATATTGCGGTTGCGCCATTGTATGCCCCTGCCCCTTCATTGCCATTTCATTGGCGCATGGCGAGGGCTGAAAACCAAGATGATGAATCCTGCATGAGTTATCCGTGATTCCTGTGCGTTGGTACAGCGCGGAAGGTTGAGCAGCCGACATATGCAGGCTTGTCGGTTCACGCGAATATCTTTAAACCTATGACTTCCAATACCCTTCGTATGTCAACCATGTTCCTGCGCACCCTGCGCGAGGACCCCGCTGATGCCGATGTCGATTCAGCCAAGCTGCTGCAGCGCGCCGGCTA # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CAAGCTTATCAAGAAGGGTGAATGCTAATTCCCAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.50,-0.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [63.3-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0 Confidence: HIGH] # Array family : NA //