Array 1 1768-2508 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADQUD010000053.1 Corynebacterium belfantii strain 01-16 NODE_53_length_15545_cov_35.890258, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================= ================== 1768 36 100.0 28 .................................... AAGTCGCCCGACCTAGCAGGAATCATGC 1832 36 100.0 28 .................................... CCACCGCCAAAGGCATCGCCATTTACGC 1896 36 100.0 28 .................................... CGAATCGATAAAAAGCGGTGTGGGGCCG 1960 36 100.0 28 .................................... TATACAATGCCGGATGGTAGCGAAACTA 2024 36 100.0 28 .................................... GCGGCCTGCAGATCAGCACCAGACAGGT 2088 36 100.0 28 .................................... CGAATCGATAAAAAGCGGTGTGGGGCCG 2152 36 100.0 28 .................................... AAGTCGCCCGACCTAGCAGGAATCATGC 2216 36 100.0 28 .................................... CTGTGCGAAGCCCTCCTACCGGCCAGCC 2280 36 100.0 28 .................................... TCCGCAGCAGTCGCAACATTACCGATCA 2344 36 100.0 28 .................................... TGCCGGAGCTACGCCTGCACCCCGCACA 2408 36 100.0 29 .................................... CCCGATGCTGGGATCCCTGCTGCCGCTGC 2473 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================= ================== 12 36 100.0 28 GCTGGGGTTCAGTTCTCAAAAACCCTGATAGACTTC # Left flank : ACACCATTACTTCATCAAGTACTGCGTCAGTGACCGCGGAAATCGTCTCATGGGAGATGTCCACCCGCATAACAGTGGCCATATGGTGCCTGATATCGCGCACGGTCATCCCACTGGCATACAAGCTCACGATCATGTCATCGACATCCGTTAAACGCCTCGAGCCTTTCGGGACCATGGTGGGAATATACGTCCCAGCTCTATCCTTGGGGACGTCTACGGTAACTGGCCCGTCGTTGGGATCAACAGTCTTTAGGTAGGTGCCGTTGCGATAATTGTAGATCCCAGCAGCAGCTTTAGCTTCGCGATTTCAGCATGAGCAAGCAGCTTTTCCTCAGGTCGCGTCAATCTTGGCCTTATCAGCCGAGTCTCGTCTTACCACAGTAGTCATTCTGACTTATCTCCTTATGCGGAATAGAATCCCAAACACAAACCATCAGGCACCCTCATTCCCAAAAACCCTGATAAACTTCTCCTACGGTTCATCCCCGCTGGTGCGG # Right flank : CAGGTAGCCCAAAAAATCCTGTTTAACATGGTTTTTTGGGCTACCTGAAGTCTAAAAAATCGCGAGTTGATCAGGCTTTTCTTCGCCAGAAACCTCTGCAGAAGAAGAAAAACGGATCATCTTCGACCATTGGATGTCCGATACCGAAAGGATTCGAACATCCCCACCTGGGGGTAATTTTTCTTTAATTAATTTCACCAAATTAGATAACTTTGCGGCCAGAGGCAGGTACTGCACATATACACTCAGCTGTGCCATACAGAATCCAAGATCTAAAAGATTCTGACGAAACGCCGTTGCTTGCTTTCGCTGAGTCTTTGTCTTCACCGGAAGATCAAACATCACCACACACCACACCGGATCGCTACCTTTCTTCGGCATCGAAGGGACCTTCCCAAATAGGCGGTACTAATTTCTCAACATCACCTTCCACATACCGCCCATACTGTTGAGCGAACGCGGTAAAAACCGTCGGAATTGACTGCCCCGCAGAATTGAAA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTGGGGTTCAGTTCTCAAAAACCCTGATAGACTTC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:52.78%AT] # Reference repeat match prediction: F [matched GCTGGGGTTCAGTTCTCAAAAACCCTGATAGACTTC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-1.20,-3.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [45.0-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0.64 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], // Array 1 53912-55528 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADQUD010000015.1 Corynebacterium belfantii strain 01-16 NODE_15_length_55742_cov_38.288142, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 53912 29 100.0 32 ............................. ATGTGTAGGATGAATGGTATAGCGTGTTTCGT 53973 29 100.0 33 ............................. TCCTTGATCAGCTTCCTGATCGTCACATCCGCG 54035 29 100.0 32 ............................. CAGATTGTGAAACCACGTTGAGCCGGCGTCAC 54096 29 100.0 32 ............................. TACGTTAAGGAGTGCTTCAACTTGTGCTTTTG 54157 29 100.0 33 ............................. GGTTAATAACCTCTTTCCATGCGCGCATATTGC 54219 29 100.0 33 ............................. TCCTTGATCAGCTTCCTGATCGTCACATCCGCG 54281 29 100.0 32 ............................. TACGTTAAGGAGTGCTTCAACTTGTGCTTTTG 54342 29 100.0 32 ............................. GTAGTGGAGCTGAACCCTAGAAAAGCGATTGC 54403 29 100.0 31 ............................. ATACCTCGGGCAGTATCTTCGGTGCTGATGG 54463 29 100.0 32 ............................. CGCTACCGCAAGGGTGGCGGCCCTTCCCATAT 54524 29 100.0 32 ............................. ACTATTGCCATTAACCGTTTGGCCTTTCAGCC 54585 29 100.0 32 ............................. ATCTCCCAAGACACTGGTGACCCCCGTGCAAT 54646 29 96.6 32 ............................G CGACGGCCACGCCGAGCGCGACGGCTAGCGCA 54707 29 100.0 32 ............................. AGGAGGGGATAGTGTGACGGCGCTTGCTTATA 54768 29 96.6 32 ............................T AAGCGCCTTATCGAGGCGTGGCAGAAAGAACT 54829 29 100.0 32 ............................. TTAATGGTGGCAGCGTCGAAGTTCCCAGGCGG 54890 29 100.0 32 ............................. TGGTTTTTCATCGCAGTAGCCTCCAAAATGTC 54951 29 100.0 32 ............................. GCTATTAAAGAAATCGGTGCTCCCACCGTCCA 55012 29 100.0 32 ............................. ATCACCGAGGTTGGGGACATCTGGCCAGTGGT 55073 29 100.0 32 ............................. GGTAGAAGGGTGAAGGCCTGTGTCGCGTTGTA 55134 29 100.0 32 ............................. ACTGTGGAAATGACTTCAGTGAACGTATCCCA 55195 29 100.0 32 ............................. GGCAACAGCTTGCCCCACACATCAACTTGGAT 55256 29 100.0 32 ............................. AAGTTTGAAACCCGGCCATACACGCCCCTTCG 55317 29 100.0 32 ............................. GTCTCAGCAGCCTCCATCGCCTCCGCGATCGT 55378 29 100.0 32 ............................. GCCTCGAAGCCTCCGACCTGCGGCGTGTATGT 55439 29 100.0 32 ............................. GAGAGAACGGTTTCGGTACAGCGGGGCGCTGC 55500 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================= ================== 27 29 99.7 32 GTCTTCTCCGCACACGCGGAGGTATTTCC # Left flank : GTCGGCATCTCCGCCGTGAGATTCATTCAAGAAAAATAACGGCAGGTATGCTCGAAGCACTAATGGAAGTGCTGACACCGTATCTTCCAAATCGTAATGACGATCGGCTAATCGGCGACAGTGACGAAGTCAAAGGGCATATACAGTATGGCAAGGAGATTAACTAGATGTTCGCTGTACTTTACCTTCAGGCAGCACCTGATCATCTCCTTGGTTACGTCACCCGTTTCCTTACTGAAGCGGATACAAGCCTTTACGTTGGAAATGTTTCCAAAAATGTAGCTTCAAATTTATGGATTCGTGTAACAGAAGCTATTAAAGATGCTCATGCCACAATGGTTGTGAGCGATAATTCTCGTGAGCAAGGTTTCTCAATAATGACGACAGGTAATAGCACACTACAAGTCCTTGATGCAGATGGGCTGTCCGTTTTGGCCTCACGCCCTGGACGAGCCGCTGTAAAAATACATGGTCTACAGTAAAACTGCAGTACAGTTAGT # Right flank : CGATTGGTGTAGTGGCTGCGGGGGTTTCTCCGTCCATGGTGACCTCCTGGGTCTGTTGTTTTTTGGATATGAGAAAACCCCGCTCCATGAACTGCTCCCCATTAGTTGGACTGAGAAATCAGTTACCTACTAGTGGGGAGCAGTTGTATGCGTGCACGTAGTTCGTTGTCGGCGGGACAGCGGGAAGAATTGGTGGCTCTTTTCGAGCAGGGTT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTCTCCGCACACGCGGAGGTATTTCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-10.90,-10.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [53.3-41.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.64,0.37 Confidence: LOW] # Array family : NA //