Array 1 35-721 **** Predicted by CRISPRDetect 2.4 *** >NZ_HE974285.1 Microcystis aeruginosa PCC 9701, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ==================================== ================== 35 37 100.0 35 ..................................... TTAATTTTATTGGCAATCGCGGTCAAATTTGTTTT 107 37 100.0 35 ..................................... TAGCTTGAAACTTCGCACCGATAAGGCTTTTAAGG 179 37 100.0 34 ..................................... TATACCTATAATATAATATAATATATTGTGTAAG 250 37 100.0 35 ..................................... TAGCTTGAAACTTCGCACCGATAAGGCTTTTAAGG 322 37 100.0 36 ..................................... GTTGTTATTTCTCTATATCCTGATAATCTTTCTTCA 395 37 100.0 35 ..................................... AGGGAACGAATGCGATCGATGGTGTTACCCGTCTA 467 37 100.0 35 ..................................... AAGTAACTATTTAAAGTGGTACAATTGTAGTAATG 539 37 100.0 36 ..................................... CTGACAGCCCTAGCGATTGAGACAACTTCCTTAGAG 612 37 100.0 36 ..................................... ATTTTCGATGGTGATTTGAGTGTATAAATCATCAAA 685 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ==================================== ================== 10 37 100.0 35 GTTCCAATTAATCTTAAACCCTATTAGGGATTGAAAC # Left flank : GGCCCCAAATAATGGCTCGAAGGGATTGAGGCAAG # Right flank : AAATCAGGGTACAGGGTGCGAAGCTTCTCAAGGTATTTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCCAATTAATCTTAAACCCTATTAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-3.90,-3.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [26.7-36.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.27 Confidence: HIGH] # Array family : NA // Array 1 27-855 **** Predicted by CRISPRDetect 2.4 *** >NZ_HE974315.1 Microcystis aeruginosa PCC 9701, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ========================================= ================== 27 37 97.3 37 .......................C............. GCCGTAGCAATTGTAGTCCCATTCCGCACTAAACTTG 101 37 97.3 34 .......................C............. ACGGTAAATTCTCCATCTATAAGGTCATTGCTAC 172 37 97.3 33 .......................C............. TGGGAAGTTGGGGGATAGTCTCGGAAGTTGGGG 242 37 100.0 35 ..................................... TGCTTGCATACTATGCAAGTCTTTTTCCTGATACA 314 37 100.0 41 ..................................... TTGGCTTTATCAGTACATATTGCATAGCCTTGTTTTCCCGT 392 37 100.0 34 ..................................... TTGAAAATCCTCACCCGACAACCACCGAATCGGG 463 37 97.3 34 ...............................C..... TTTTAGCGTCCGTGACTTGGTAAAACTAAAACTT 534 37 100.0 34 ..................................... ATAGCTATGAACTGGTTTAACCGGCACGGGATCG 605 37 100.0 36 ..................................... GCCGTGAGCTGCCAAAGGCTTAAGAAATCAGCAGCC 678 37 100.0 33 ..................................... GCACGGCAGCGCAAGGTATTAGAGGAGATTCGA 748 37 100.0 34 ..................................... TATTTTTGAGATTTAAGCTGATTAAAGTGGAAAA 819 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ========================================= ================== 12 37 99.1 35 GTTCCAATTAATCTTAAACCCTATTAGGGATTGAAAC # Left flank : CTATATGTCCGCTGGGCTTTAATACTG # Right flank : CACCAGTAGGCTGCCAGTAATACTCGCTAGTGTTGTTCCAATTAATCTTAAACCCTATTAGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN # Questionable array : NO Score: 9.21 # Score Detail : 1:0, 2:3, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCCAATTAATCTTAAACCCTATTAGGGATTGAAAC # Alternate repeat : GTTCCAATTAATCTTAAACCCTACTAGGGATTGAAAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-3.90,-3.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [0-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [25.0-60.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.68 Confidence: HIGH] # Array family : NA // Array 1 341964-341474 **** Predicted by CRISPRDetect 2.4 *** >NZ_HE974183.1 Microcystis aeruginosa PCC 9701, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ====================================== =========================================== ================== 341963 38 100.0 35 ...................................... ATCTGAATTGATACCGTTGCTGTGCCTGAGCTAGT 341890 38 97.4 37 ....................................A. ACGTCGGCTGCTATAAACCAGGGCTCATTATCAATGA 341815 38 97.4 43 .....................................T GACCGCTTCCTTGACTAAAGCTTCGGTGGGAACCTTACCGTTA 341734 38 100.0 34 ...................................... TTTTTACTCACTCAGGCTTGGGCTTGGGCTTGGG 341662 38 100.0 35 ...................................... TTGGTTTGTCTCCAAATGGATTTTCTACTCTAAGT 341589 38 100.0 40 ...................................... AAAAAGTAGGGCTAATTCATGAATTAGCCCTACTCTTACT 341511 38 78.9 0 ...............T............AAC.T.GG.T | ========== ====== ====== ====== ====================================== =========================================== ================== 7 38 96.2 38 CCTTACCTATTAGGTCAAATAGGATTAGTTGGAAACTA # Left flank : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCTACTTAATTACAGATAATTACTTAAGCAAAATTAATTACACATCGAGAGGCGGAAACTGTACGCTAAAGTAGTAGAAAGGGTCAATCCTCAAGAGGATGATGTGCGCTTCTATGGGATTTCCGAAGAAGCTGTCTCTAGATTGTTGGTGATGGGAGGTTCTCCTCCTCAACTACCCCCAAATCTCTACATCATCTAGCTTGTCCCCTAACTCTTGACTGAAAATCGATGCACCCCCTCCCCGACCTAAAACCCCGATTCTCTGGTTAGATGTGTCGATTGCTCTCCCAGTCAGGGTTCTACCCTTTGGTATCGGGACTTTTACCCCCCCCAGTACCACCTTTTTGGAGATGCGTCGATTTGGGGGTCTGTCTTCCCCTCTCGATGAGACTTTCCAAGGGGTACT # Right flank : GGGTTGAAGCATGAAACCCAACGCCCGATTATGTTACGCTACCGCTAACCCATCCTACAAATAATTGTGCCTACCTACTTAGGACATTCTGGGCGCACGCGATGCGCCCCTACCATTGGCACAATAATAATAATATTATTGTAGGGGCGAATTGCATTCGCCCTCTTTAATTAGAAACCCTTTTTCTAATAAATTGTGTCAAATATATCTTGACAAAAATCGATAAAAATGCTAATTAAATTACGAACAGCTTAATATGTCCCGTGGGAAACAGTGGGACAAAAGCGAGCGGAAGACCGCCAAAAATGCCTCTTAGCTTAACTACTATAAGAATTCATCTTTCTATCGTATTGAGGACGACAGGGACTACCCCAAGCGACCTTTTGAGCGGGAATATCGGCAAATACGCTGCTTCTTGCCCCAATAACAACATTAGAGCCAATTTTTACCCCCGGAGCCAAAAAACAATCGGCTGCGATCCATGTACCATTACCGATGAG # Questionable array : NO Score: 3.07 # Score Detail : 1:0, 2:0, 3:0, 4:0.81, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCTTACCTATTAGGTCAAATAGGATTAGTTGGAAACTA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:65.79%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-4.70,-4.90] Score: 0/0.37 # Array degeneracy analysis prediction: R [8-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [50.0-45.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA // Array 2 980455-979711 **** Predicted by CRISPRDetect 2.4 *** >NZ_HE974183.1 Microcystis aeruginosa PCC 9701, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ==================================== ================== 980454 36 100.0 34 .................................... CAGTACTTTAGAGCTTGCAATCAATCAAGCCAAA 980384 36 100.0 36 .................................... ACTACCGAAACTATTTACAGTGTTGATGATTTGTTT 980312 36 100.0 35 .................................... TAAATAACAACATCAAACCATCTGCTTATGCCGAC 980241 36 100.0 35 .................................... AATCAAGAATTGATTGATTTATTCAACTCGATCGA 980170 36 100.0 36 .................................... TCCCCAACTTTGATTTCCGAAATATGCACATCGTTA 980098 36 100.0 34 .................................... ATGCAGTCCAGCATCGATATTGAGGCTTTCATTA 980028 36 100.0 35 .................................... ATTGAAAAATCGGAATTAAGAGAGGCTTTTTCTTT 979957 36 100.0 34 .................................... ACATTGGTGGAACCATTGGCGGTCAAGTTGCTCA 979887 36 100.0 35 .................................... CAAACTATTCCTTTTAAATCCACTCCTGTAGACGG 979816 36 100.0 34 .................................... AAGTATTCCGACGCTTTGAGAGCTATTGCGGAAT 979746 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ==================================== ================== 11 36 100.0 35 GTGTACTAACCTTTGATGCCGTAAGGCGTTGATCAC # Left flank : GTCCGCAACGCTGGCGTAAAGCTTACAGAATTTTAGTCGGTTACGGCGATCGCATTCAATACTCGATTTTTCGCTGTTGGTTAAGTGCGCGAATGCGAGAAAAATTGCGCTGGGAATTGGAAAAAGTCCTCACCCTAAAAGACGACTTAATTTTAATTCGTCTGTCGGAGCAGTGTGTCCGCGATCTGCCTAAGTACAACCGACCTGACACATGGCTTTTGGACGAAAAAGGGTTTCGGGTAATCTAAAAAAAACAAGCATCTCTGGCTGGGAAAAAATCCACGGGCTAAAATTTATTTGTATTGCTAATGCTGTCTCGGTTTCAGGGTTTGACAAGGAACAATTCCTGCTTGCATTTTCTAAAAATCTCACTGGATAACGGTTTTCAGCTTCGGTGCTGTCACTCAAAAGCTCTGATCAGAAGATTTCTTGGCGTTTTTCTAGAGGTGCTTGTAAAATGGACTGTGAAGCTATACACCAAAGGCTTTTTCAGCCTCGCC # Right flank : AGGCAGATTTTGATCCCATATTCCGCACTTCACTTTGAAGTATAAAAAACTACAGGTCTTTTCAAAGAAAAAAAATCAGAATAATCAAAAAAAAATACTCAACCAATCAGATGTTGAGGAGAAATCATAAAATACCAAATGTTTTTTAGGCTCAAAGAGTTAAACTAAGTCACAACAATTGGAGGAGTAGTGACTCTCCTATAAGCATATTACTCAATTGTTATCAACTTTGTTGCTTTTTTATTTAGACTAAGATGACAGATAATATTTTTGACAAGATGAAGGCAGAAAATTTAAAATAAAACTGCGCTCTTCAGTTAAATTGACAATTTGCTTGACCCCATTCAAAATAAAAATAAGTAGGTAGGCGTTAAAAATTATCAGACACCACCCTGATCAAGGGGGGACTAAGGGTAGGGTTGATTCATGAATCAACCCTACTATGAATCAACTCTAGGACTAAGGGGGGATCGAACCTAAAATCCATTTTTAATTTAATT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTACTAACCTTTGATGCCGTAAGGCGTTGATCAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:52.78%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-4.00,-7.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [63.3-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.37 Confidence: LOW] # Array family : NA // Array 1 11353-13379 **** Predicted by CRISPRDetect 2.4 *** >NZ_CAIQ01000135.1 Microcystis aeruginosa PCC 9701, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================================ ================== 11353 36 100.0 42 .................................... AGAGAAAGTATAAACAGTGAGTCCATTAATAACCTCAAGTTT 11431 36 100.0 36 .................................... CCGAAAAGCTTATTGATACTTTGCGGCGGGTTGGCG 11503 36 100.0 36 .................................... TTAATTTTTGAGTATAAAATGTTGCGTTTTTTTTGT 11575 36 100.0 36 .................................... CAATTTCTTGCAAATTTACACTCTTTTTCAGTTACG 11647 36 100.0 35 .................................... AATATTGAGGACAGCGGTTAATGTATTGGTAGACA 11718 36 100.0 36 .................................... TGGGCAAATAACATCGTGAGCCTCTGTTACTTCTTG 11790 36 100.0 36 .................................... TCGGCTTCATCTTTCCAGTCAGAATCGTTTTGATTG 11862 36 100.0 37 .................................... AATTATTAACTTTTTAGCAACTATTATATTAAGTATA 11935 36 100.0 36 .................................... CACATCTTAATTATTAGCTTGATGAACCCGTAACCA 12007 36 100.0 38 .................................... TAATTAGTTACACTAATCGCCGCTGGCTGTCCTTTACA 12081 36 100.0 41 .................................... TTACTGTCAGCAAAATCGTTGACATCCATAAACCAGTCTTG 12158 36 100.0 37 .................................... GAGAAAAGATAGGGAGAAATAAACGAACTAGACAATA 12231 36 100.0 35 .................................... TAATTAATGATCAAGCGGTTAGATTTTACTTTTAC 12302 36 100.0 35 .................................... TAAATCAACGCGAAGTAGGCTATCACGACGACCTA 12373 36 100.0 44 .................................... TCTCATAGAGGCACTCCTCTACTTGATCCCGGTCCACCCGGCTA 12453 36 100.0 42 .................................... GTGGTGGGGTACAGGGAGTTAGGGAAGGCGTTTAAAATGTAA 12531 36 100.0 36 .................................... TGGGGGTGCTATTGTCCCCACAACTGCGCCTACTGC 12603 36 100.0 37 .................................... TAAATCATATATCCTCTTGGAATTAAGTACACCAAAA 12676 36 100.0 39 .................................... AGAAAATAGAGAAATCACATTCTTCTTCAGAGGCATTAA 12751 36 100.0 39 .................................... TTTTGCGATAGCCGTTCCCTCAAACCCGTCTAGTATAGA 12826 36 100.0 36 .................................... GCCTATTTCCTGCCTTAGTGTCTGGCATTTCGTGAA 12898 36 100.0 36 .................................... TTAGTCAGTAAGTGTCGGCTCCGCTTCCCATACTTA 12970 36 100.0 41 .................................... AGTTTTGACAAGCGTATTTTGCGGCTTCATAACTACAAAAA 13047 36 100.0 35 .................................... GTTACCTCCACATATCCGTTACCGTACACTTCTTT 13118 36 100.0 38 .................................... TCGAGTAACCAGTAAGCTCCCCCATTTTCTGCTAAATA 13192 36 100.0 37 .................................... AACCATAGGTTCTGATTGTTTCTTTTTTTGTAGCCAT 13265 36 100.0 42 .................................... TTCCTAGTTTGGTAGGGTTGATTCATGAATCAACCCTACTTT 13343 36 77.8 0 ............CTT...............CTCCC. | A [13355] ========== ====== ====== ====== ==================================== ============================================ ================== 28 36 99.2 38 CTCTCTACTCGCTAGAGAAATTAATTGAATGGAAAC # Left flank : ATCAGCCCTATTTGATCCGTTAATCATGTTATTTTATGTCATCGCCTATGATATTCCCTGCAATAAAAGACGTAAAAAAGTGGCTGATTTACTAGAAGGATACGGCCAACGGGTTCAGTATTCAGTTTTCGAGTGTGTTTTAAGCAAATCTCTATACAATCAGTTAAGAGAACGCCTGCAAAAGCAAATCAAAGAAAACGAGGATAGTATTCGATTTTACCCCATCTCTGGCCATACTTTAGCACAAATAGAGACTTTAGGCGGTGTCCCGCTAACTAAAGCGCCAAGTTCTACGATCATCTGATTCGGTATCATCGACTAGCGACCGACAGGGGTGGGAGCAGATAACCTCGGTTTCCGGTAAAATCCCTCGATCTACCACGGGATAAGGGTTTTGTGGTTTATGGGGTTGACTGTACGACCGTATCTAGCTATAATTAACTTATCCGTCGCAACTGGCTTCTGAACCTCAATCCTGTTCGGACGTTTGCCTACCGGCT # Right flank : CCAATCCCTTTCCTGTTGACCCTTGCAAAAGTGCCTCATCTCAACAGACGATTTAAATGCGCGGGCAGCTTATTCTATATGGTAATGTTTAATTATATTCCCACAAAAGTTGCTTATGTCCTTACCTGAACTCCCTCTTCATCTTCAATTAACCCAAATGGTTTCGGGTTACTGGCTATCTCAGGCCATCTATGCTGCGGCTAAATTGAGTCTAGCCGAGCATTTAAGCAAAGGAGCGAAATCTTGTCAAGAATTGGCCTCCCTAACTGAGACTAATCCTGCTGCTTTATACCGACTGATGCGAGCGTTAGCTAGTGTGGGAATTTTTCAAGAAACTGAATCTCAACAGTTTATACTAACTCCCTTAGCCGAACATTTATCTAGTGACCATCCCCGGTCAGTAAAAGCGACAGCAATTATGTTAGGAGAAGCCCCCCATTATCAAGCCTGGGGAAATGTGTTACATAGTATTAAAACGGGACAACCATCCTTTGATGATG # Questionable array : NO Score: 3.22 # Score Detail : 1:0, 2:0, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTCTCTACTCGCTAGAGAAATTAATTGAATGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.89%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.30,-1.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [46.7-55.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA // Array 1 34-1502 **** Predicted by CRISPRDetect 2.4 *** >NZ_CAIQ01000001.1 Microcystis aeruginosa PCC 9701, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================= ================== 34 37 100.0 35 ..................................... AAAAGCTAGAGATTTTTTTAATGCTTTAATTTTTG 106 37 100.0 35 ..................................... GATCCCCCCTAGCCTCAATTCTTACCCCTATTTTT 178 37 100.0 35 ..................................... AGGGTGCGATCGATTCTGCAGCCCAGGCGATCGGT 250 37 100.0 35 ..................................... GTAGTACTCAGTACCCGTAAATCGGCCAAGATTTT 322 37 100.0 34 ..................................... TTGTCCCGTCCAGAATTCCTGCTTAGAATTAAAA 393 37 100.0 36 ..................................... AGTGTGCCACTAAGGGTACCGTTGGTACCCTGTACC 466 37 100.0 34 ..................................... ATGGGACGGCGCTCAAGCTTTAATCGAGTATCTG 537 37 100.0 34 ..................................... ATAAAGTAAATTCTCGGAGGTGAAAGGATTATCG 608 37 100.0 34 ..................................... TATTAAGGCTATCTTCCAAATCTTCCAGATACTC 679 37 100.0 35 ..................................... ATCGAGATGGTAGGCTATGCACTCAAGCTATCTAC 751 37 100.0 33 ..................................... TTATCTTCCATAGTTCCCCCCCCCTTAAAAGAT 821 37 100.0 33 ..................................... AAGGTTATCGGGGTCTTTATTTAGGAATAACGC 891 37 100.0 34 ..................................... TATTAAGGCTATCTTCCAAATCTTCCAGATACTC 962 37 100.0 35 ..................................... ATCGAGATGGTAGGCTATGCACTCAAGCTATCTAC 1034 37 100.0 34 ..................................... TTTTTCCCAATACTGATTGACCCATCCCGCTCGT 1105 37 100.0 34 ..................................... AGAACGCGAAATTCGAGGGACTGGCTGCACTCCC 1176 37 100.0 34 ..................................... TAGCTTCTAAAGCTTCAATCCTTGATAATAGTTC 1247 37 100.0 35 ..................................... CAACTATCATCATCCCAACTTAAGATGGGATGATT 1319 37 97.3 39 .......................C............. CGGCTATGAGAAATGTACTGATTAAAGCCCGCGGCCTAA 1395 37 97.3 34 .......................C............. CCGGCATACTTCCAATTTCTTTCGGCCGTGGCTG 1466 37 97.3 0 .......................C............. | ========== ====== ====== ====== ===================================== ======================================= ================== 21 37 99.6 35 GTTCCAATTAATCTTAAACCCTATTAGGGATTGAAAC # Left flank : AAGGGAACTATGACGACTTAACTTCTGTACCCTG # Right flank : GAATCTCAGTCACGCCTATGAAGTGACCCTTACTTGTTCCAATTAATCTTAAACCCTACT # Questionable array : NO Score: 9.24 # Score Detail : 1:0, 2:3, 3:3, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCCAATTAATCTTAAACCCTATTAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-3.90,-3.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [31.7-60.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.27 Confidence: HIGH] # Array family : NA // Array 1 1462-42 **** Predicted by CRISPRDetect 2.4 *** >NZ_HE974262.1 Microcystis aeruginosa PCC 9701, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================== ================== 1461 37 100.0 35 ..................................... CAGGACTTAATTAATTCTTCTATTGGTGGGATAAC 1389 37 100.0 37 ..................................... CATTTGGGAAGGCTTTTGATGCTGACAACCGAGTAAT 1315 37 100.0 35 ..................................... AATAGACAGTGCAATTTCTGCTTTTTTAATCAAAG 1243 37 100.0 35 ..................................... TAGTATCTCGATTCTGTAGGGGGATTCTTCTTCTT 1171 37 100.0 33 ..................................... TAATAGTTTCTATATTGACTTTTCAAAATGACT 1101 37 100.0 35 ..................................... TAGCACTCAGGATAGAGTGCCATATCTCCCGCAGG 1029 37 100.0 38 ..................................... TTGGCTGGAGAAATGGGAGCAAAGCAAGGGAAAACGAA 954 37 100.0 36 ..................................... TCGCCGGTTGTCATCATAAATTAAAAGGGTATTCAA 881 37 100.0 36 ..................................... TTTTGATGGACCGAAACCGTTGATAATATTGGTCTT 808 37 100.0 36 ..................................... AAACCAGTTTATCAGCCTCAAAATAGCTCGAAAACA 735 37 100.0 36 ..................................... TTATCTGGGATTGACCGGGGAACATTGAAGGGTATT 662 37 100.0 34 ..................................... TAATCGCCCGGACACTGAAAACCTTCAACCGGGT 591 37 100.0 36 ..................................... TCGATGCTAAGACAGACTCCCGGCGCTCGCTAATTT 518 37 100.0 34 ..................................... TCAACGAACATTATACTATGTTTTTAGGAACATA 447 37 100.0 37 ..................................... AAAGAATAAGGAGGAGGTGGGGAGGCAGGAACGGCAG 373 37 100.0 35 ..................................... CTACAAGTTCTATTGATTCTCTTGTTAGTTCTCTT 301 37 100.0 37 ..................................... TGAGCGATTAGCTGGACTGCTTCCTGGAATATTTAGG 227 37 100.0 35 ..................................... AGCAGCTTGGATTATTGGGGGGGGAAATAGTCTGG 155 37 100.0 40 ..................................... CCCTCATTGTCGTAGGTATTAAATTCTAGTACCGACTCAT 78 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ======================================== ================== 20 37 100.0 36 GTTCCAATTAATCTTAAACCCTACTAGGGATTGAAAC # Left flank : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGATTGAAACGCCTCCGGAAATTAGGCTGGAACTCGATCGCT # Right flank : CAGGTGTGAGTAAACAGACGATCAGCAATTGGGAGGTTCCAA # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCCAATTAATCTTAAACCCTACTAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.86%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-3.50,-3.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [36.7-35.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.87 Confidence: HIGH] # Array family : NA // Array 1 4800-37 **** Predicted by CRISPRDetect 2.4 *** >NZ_CAIQ01000030.1 Microcystis aeruginosa PCC 9701, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================== ================== 4799 37 100.0 36 ..................................... CACCCCAGAATCAACAGGCAATTGAGAGAAATTCGG 4726 37 100.0 34 ..................................... ATTCAGCAACTATACGCGACGAGGAATGATGAGG 4655 37 100.0 39 ..................................... AAACGATCTCTTAAGAATTGTTTTTTAGCTTTGGGGCTT 4579 37 100.0 33 ..................................... CAAAAATCCTCGCCACGGCTCCGATCAGCCATT 4509 37 100.0 36 ..................................... CTAAGAAAGCCGGGGCCATTCTTAGTCAGGGTCGGG 4436 37 100.0 34 ..................................... AAATCTAATTCTTTTAAAAGAGGGCAATCTTTAT 4365 37 100.0 33 ..................................... GCGAATCGACCACCCCAACGATCCTGATTGGTT 4295 37 100.0 35 ..................................... TTACAACTGGGAATAACAGTAATGGTTATATTATT 4223 37 100.0 34 ..................................... CGCAATGGTAGCCCTAAGCTATCTGAGGTAATCT 4152 37 100.0 34 ..................................... TCAAAATGCGATCGTTAATCTACAAAGAAGCTTT 4081 37 100.0 36 ..................................... ATTGCCCTAAACTAGCATCAGCAAAGGATTTATTTA 4008 37 100.0 34 ..................................... TGCCACTTTCTGGAATAGGGTAATCGTCAAAGTT 3937 37 100.0 34 ..................................... TCCCCTAAATCTTTAAATTGCTGATCAATCTGTT 3866 37 100.0 34 ..................................... AGAAACGGCGATCGGGGACGGGATTAATCGCACT 3795 37 100.0 36 ..................................... ACGCCATCAATGACCAAATCCTGATCTAATTCCGTC 3722 37 100.0 34 ..................................... AGGATTTACCCCTAACTCTCTCGCTGTATCACGC 3651 37 100.0 34 ..................................... TTTACTCTTGTTAATCCGCAAACATTAGCCGCTA 3580 37 100.0 34 ..................................... AAAAGTAATTCCTGGCAAGCCAAAAAAAGCAGTA 3509 37 100.0 37 ..................................... ATACTTCCATCGATGGAACGGTAGAGACTGCTATCAT 3435 37 100.0 35 ..................................... AGAAAACGTTGACCTTGAAAATCTTACTCAAGCAA 3363 37 100.0 35 ..................................... CGGGCTAAGGCCCAGTCCGAGGGGAAAACGATCAC 3291 37 100.0 35 ..................................... ATCGGACATCTATTCAATTGATCGCGAATTTTAAG 3219 37 100.0 34 ..................................... GAATAATTTTAAGTAATTAACCACAAAGAAAAAA 3148 37 100.0 33 ..................................... AATCATCGAAGCAATTAAGCTTAAGCCTTATTA 3078 37 100.0 40 ..................................... CTTCTTAGTTTTATGGATTTAGGGCAAAAACGCTATATAT 3001 37 100.0 34 ..................................... TAATAATTCTCCCCGATCTGGCGACTTTTATGGA 2930 37 100.0 33 ..................................... CAGCCATAAATCCTCTTCAATTTATCTCTATTG 2860 37 100.0 35 ..................................... CTGTTTGCCAATGGAGAAGGTCAATGATGTGGCGT 2788 37 100.0 35 ..................................... TAACATTGTCTAGGGTGTTAACCCACTGCTTACCG 2716 37 100.0 34 ..................................... TGGCGAATTACGATTAAGTACGCGAATTGAAACA 2645 37 100.0 34 ..................................... TCGATCCGGTGTGAGTATTCCGAATATCCCAATA 2574 37 100.0 34 ..................................... TATGCCAACTTTGACAGACAGAATCGAAGCGATC 2503 37 100.0 34 ..................................... AAGGTTGAGGAAACTAAATCCGAAATAATTGCGA 2432 37 100.0 34 ..................................... GCGGGAAACGGTAGATAGGGAGGCTGATAAGCAG 2361 37 100.0 34 ..................................... AGCTTTTGAATCTACGGTAGCTCGATCGATGGGG 2290 37 100.0 36 ..................................... GATTTAGATGCGTGGTATCAAAATTTAAAAGAGGCA 2217 37 100.0 35 ..................................... CGGTCTCTAGAATGCCTCCCAAGCTTCCCCCAGTT 2145 37 100.0 35 ..................................... GGAGCTACAAAATATATCGCATAAGGCTGAAGAGT 2073 37 100.0 34 ..................................... GAACTCTTGAAAGTCGTATTAGAGGAAAGAAATT 2002 37 100.0 36 ..................................... TCACTGGTACAGAGCAATCGACAACAGGATGGCCTA 1929 37 100.0 34 ..................................... AAAAATCAAGATCGATATTCTCAAGATCATTTTC 1858 37 97.3 34 .......................C............. AAAAATCAAGATCGATATTCTCAAGATCATTTTC 1787 37 97.3 35 .......................C............. ACTGCTTGCAGAATATCTGATTCAGAAATCAGATT 1715 37 97.3 34 .......................C............. TATATTTAATCATTTTTTTGATACAGCCAAAAGC 1644 37 97.3 34 .......................C............. CATTTACTTTAGCGGCTAATGCTCTTGTATCCAC 1573 37 97.3 36 .......................C............. AAGTTAATTTCTGGTGAAAACGCTTTGAAGCAAGTT 1500 37 97.3 34 .......................C............. ACTGAAATTCAGCCTGAGAGAATGGAGAAATCTG 1429 37 97.3 34 .......................C............. AATAATTAGGGAAAGATTCATGCGAACATTAGGA 1358 37 97.3 35 .......................C............. GAAATTCCAATTCGAGCTACTACCCCGGCGACCCC 1286 37 100.0 34 ..................................... GAGAATATGTGTACTGCTGCCCCTTAAAGTATAG 1215 37 100.0 34 ..................................... CTGCCCGATCCGATAGCACCTATCCTCGGCTGGG 1144 37 100.0 34 ..................................... AAGGTACAGGAAAAAGATATTAAAGATACGATTG 1073 37 100.0 35 ..................................... CGCAGGCCGCCATAGGGTTATAGGCTCGTTATTGT 1001 37 100.0 34 ..................................... AAGTATTTTCCCAGAGAATCCCTATAGTGCCACG 930 37 97.3 34 .......................C............. CACAGATAATGGTAAAAACTGGAAGTGGAATTTA 859 37 97.3 35 .......................C............. GATAAAAACCGCCATATCAGAGATTAGCCTTTCGC 787 37 97.3 35 .......................C............. TAATTCAGCAGTATTCTTAAGCATTAATTCCACTT 715 37 97.3 33 .......................C............. CGCGATTGAAAAGTGCGACCGCGACTGGCAAGG 645 37 97.3 35 .......................C............. CAATGATGCCAGTGCCTAGGGAAGGGTAAATATTC 573 37 97.3 34 .......................C............. GCCAACTTAATAGCTTCCAGTTGCCCCTTAAATT 502 37 97.3 33 .......................C............. ATGCTATCCAACTCCGACCATTCTATTATCCAA 432 37 97.3 34 .......................C............. ATCAAAAAGGCTAATTAGGGCATCCTTGAAGGTA 361 37 97.3 34 .......................C............. ATAAGGCAGATTCAATCGGCGATAAATCTCGCTG 290 37 97.3 38 .......................C............. ATAATGGGAGTGAATTAAATTTAAAAAGAATTAGCCTT 215 37 97.3 34 .......................C............. AGGAAAAAATTCAGGGGAAGGGTTTGAGATTGGG 144 37 97.3 34 .......................C............. TCACTCAAGCTGACTCTCTAGGGGTTGACGGTGA 73 37 97.3 0 .......................C............. | ========== ====== ====== ====== ===================================== ======================================== ================== 67 37 99.2 35 GTTCCAATTAATCTTAAACCCTATTAGGGATTGAAAC # Left flank : TTTGTTGTCAGTTACGACATTTCCGATGATAAGCGACGAACCAAAATTCACAATACGTTAAAGTCCTACGGCCAACGGGTGCAGTATAGTGTTTTTGAGTGCGATCTAACCGATACCCAGTACGCTAAGCTGCGCGGGCGCTTGAGTAAGTTGATCAAACCCGATACCGATAGCATCCGCTTTTATTTTCTCTGCGCCTGTTGTCGGGGTAAAGTGGAACGCATCGGTGGTGAGTTACCCCGGGATAATACAATTTTTTTTGTTTAGCTCGGTTGCGCTTCGGGGTAGCTGTAAAAATCCTTAACTATTATCTGGTGGCTGAAAAGCTTATGCAATATAGATTCGAGATGATTTTCCTTTCCAACGCGGGGCGCACCTTATCCCGTAAGGTTTTGCGGGGTCTTGAAGAACTGGGTCACTTGCTGTATGATTGGTTTATTGCGGGTGCGGCGCATACGAACCTTGAAAATCCCATAGCGTATGGCTTTTACCACTGGGCG # Right flank : CATGGGAAACCGGGCAAAAAGTAACCGAGCGTGCGAG # Questionable array : NO Score: 9.22 # Score Detail : 1:0, 2:3, 3:3, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCCAATTAATCTTAAACCCTATTAGGGATTGAAAC # Alternate repeat : GTTCCAATTAATCTTAAACCCTACTAGGGATTGAAAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-3.50,-3.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [0-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [26.7-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : NA //