Array 1 1706280-1707347 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP035758.1 Ktedonosporobacter rubrisoli strain SCAWS-G2 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ========================================= ================== 1706280 37 91.9 37 ...............AG...................A ATAGGCTTGTTCACAAAGCAGCAACGCACGGAGGTAA 1706354 37 91.9 37 ...............A......C....G......... CGTTAATGGGGATCTCTGGGATCTGTTTTTCAACCCG 1706428 37 100.0 38 ..................................... GATAATGTGAGCGCTATTGTCGTGCAGACGTATACTGC 1706503 37 100.0 37 ..................................... CTCCGATAGCAGGGAGTGGTCAAGGACGAGTAGCGAC 1706577 37 100.0 36 ..................................... AGCCAGGAGAATGCTATGGCAATCAAGCATACAAAG 1706650 37 100.0 35 ..................................... CTCCTGGTCATTGCCGAAGGCATCTCTCTTCGTGA 1706722 37 100.0 37 ..................................... TTCTGCCTGTTAATCGTAAGACTACTGAAACATCATA 1706796 37 100.0 38 ..................................... TGCTACGCATCGCTTACCGTATCATCTCAAGCAGCAGC 1706871 37 97.3 38 ...................................G. ACAAAGAGGCTGATGCGAGAGCTTACAGGATAGGGTGT 1706946 37 86.5 36 C......A.......AG.......C............ CCACTTTGTTGACCACCCGAATAGCCCACTAATTGA 1707019 37 100.0 40 ..................................... GCCAATAGCGAATCACATATCGGTAGCATTGTTCCCGCTG 1707096 37 89.2 34 .......A.......AG..........G......... TTGGCTTCTTCAAAGAGACGCGGCTGCTCTTCTA 1707167 37 89.2 29 .......A.......AG..........G......... TCCTTATCCACAGCATCTTTTGGAAGATT Deletion [1707233] 1707233 37 100.0 41 ..................................... CCTTCAATAATGGGTACGCGTGTCTCTCTTTTAGAGGTCTT 1707311 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ========================================= ================== 15 37 96.4 37 GTAGCAGGGAGGAAGGACCGTTAGAGGTTACTGTAAG # Left flank : TCGGGGCAAATGTCAGGATGTAACCCTTGATGGCGAGATTGCCTGTCAAACGCCGGTCTATGCCCGCGTTGCCGCTGAGCGCTTGCGCCTGCTCGTTCCAGATCCGCAGGCAGTTGTCTAAGAAGCCCAACGAAACTCCTTAGAGCTTTGCCGTTCTCGATAAGCAGGATGGTGAAGAATAATGACCCATGGACATGATTTTTGGTTTCTTATGGCTCGCGTTCGCAAACCTCTCCATGGGGATGGAAAAACAGGCTACAGGCGAGCCTGCTTGGCTCGGTTATGTGCCTGTAGATCTACGTGTTCCGTTCTATTTCCTGTTATACCTGCTCGCAAATCTCCCCCCTTTTTGCCACAAAAAACGGTTTGCGAAAATGTGGCTATCTGTTATACTTGAGGGAAGAGAAAAGGGGCGAATTGAGGCGCTCAGAGGCTAAAATAGTCGCCTTGCGCGCCAAAAATGGGAAAATACATAGCCTCACCTTTTCTAACGAGGAGCG # Right flank : GCTCATAACCGGCGTGTAGAGCTGGAGTGAACCCCTGGGACCGGACAGTGATCGAAGTCAACTTCTCCGAAACATGGTACACTGGAACCTGACAAGGAGAAGAAGATGCAGAAACGCGTACACAGTCGCGAATTCAAGTTGGATGTCGTGCGTCAAGTAGCGACAGGGCAAAAACGCCCTGCTCAAGCATGCCGTGAATATGGCCTTGCAGAGAGTGTGCTCTCACGCTGGAGAAAAGAGTATCAGGAGCGAGGAGAAGCAGCATTTCTCCCATCACCAGCAGAAGAGTCAACGAAGCAGGAGCAGCGGATTGCCGAGCTGGAACAGTTCTGTGGACAATTGGCGCTGGAAAACCAGATTCTTAAAAAAACGTTACAGCGGTGGGAGTCGCGGATCGCCACGCAATGATTACACAGGCCCATCAGGAGCATCCTGAGCTATCGATTGCGCGGCTGTGTGACCTGCTGGACGTCAGCCGGAGCTGGTACTATGGGCGTGAC # Questionable array : NO Score: 3.08 # Score Detail : 1:0, 2:0, 3:0, 4:0.82, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTAGCAGGGAGGAAGGACCGTTAGAGGTTACTGTAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [11,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-4.30,-1.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [50.0-43.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.74,0.41 Confidence: LOW] # Array family : NA // Array 2 2498557-2498813 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP035758.1 Ktedonosporobacter rubrisoli strain SCAWS-G2 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ====================================== ================== 2498557 37 100.0 36 ..................................... CGGTTGAAATTTCAGGCGGCATCGTCCCAAAGAGCC 2498630 37 100.0 35 ..................................... TTCACGAATAACAATGGGCTCAATCAACCCATGTT 2498702 37 91.9 38 ..................A..C...........T... GCTTGTAGCCGATGTAAATCAAAGGAGAATATGCTGCC 2498777 37 91.9 0 ...A.................C...........T... | ========== ====== ====== ====== ===================================== ====================================== ================== 4 37 95.9 37 CCCGAAAGGGAGAGAAGAGCCTGGCAGGGATTGGAAC # Left flank : TGCGCGTAATGCCCGGCATCGCTGTATCGCTGACATAGAGCAAACCAGCCTCCTGAGCAACTTCGGAGGCATCAGCCGTTGCACAGGTCTGGGAAGCTTCGGAAACTGGCTGGGTATGGTGTTTCAGACTTGCGGTCATTGTGTTTTCCTCTCTACTCTGCGCACCGGGCAAGCTTTCTTCTGCTTAAACCATATATAGAGTATACGATTAGCACAGTGAAGACGCCTCATCACGCCATGAGCGAGCTATTAACGCCGCCAGCTGTATATCCCTTTCAGGGAGCATGGGATCAATGAGCTCTCAGCCATACAATGAAGCATGCGAGAGTGTAGTGCGCCATGGGTTGTGAGCTGATATGCTCGCCGGGCTTCAAGAGCGGGGTGAGCAGATGCGAAGGTAAGATGGAGCCCGCAAAGGAAGGTTGGAAAAGGGAAAATGGAGGCGACTCTCGCAAATACTTGTATAATCTGGCTTCTCAGGCTATACTAGAGAAGGTGCT # Right flank : CGCAGAAAGGCCGATAGATGCATAAACGCTACCTGGATTGTAATGCCTCTGAATTGCGCTCGATCTCCAAACCTGACCTGCTCGATGCTCTACGCGCCAGCGAAGGGCGCATCGTCGTCAGCGAAACTATAGGCGCCGTGCAGCCCTTATTGCAGACAATCACCAATGCCGAGCTAGCCGCCAGCCAAGGCGCCGATGTCCTGTTGCTGAACTTGCTCGACGTCGATACCCCCGCTATACATGGCATGCCGGCTGGCATCGAGCCTGAGGATATCATCCATGCCCTACAACACCTGACCGGTCGCGTCATTGGCGTCAATTTAGAAGCCGTTGATCCAGCTTTTCGCCAGGAACAAGGCAGTCTGTGGGATATTAAAGAAGGGCGCGTGGCAAGCGCTAGGAATGCCCAGAAACTGCTCACGATGGGCGCAAAATTCATTGTACTCACAGGAAATCCAGGAAATGGCATAACGAACAGCGCCATTACATCCTCTTTGCAA # Questionable array : NO Score: 2.66 # Score Detail : 1:0, 2:0, 3:0, 4:0.80, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCCGAAAGGGAGAGAAGAGCCTGGCAGGGATTGGAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [12,3] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.00,-0.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [55.0-51.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.15,0 Confidence: HIGH] # Array family : NA // Array 3 8548400-8547329 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP035758.1 Ktedonosporobacter rubrisoli strain SCAWS-G2 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ====================================== ================== 8548399 36 86.5 38 ..A........T.CT....-................. AAGACACCTGCTATTAAGATCGCCTCAGGCACCTCTAG T [8548377] 8548324 36 89.2 37 ...........T.CT....-................. TTCCATTTCAAGGAGCTGGTAGCATGCAGGAGATGGC T [8548302] 8548250 37 94.6 38 ...........T.......T................. AGTCCGCTGTAGGAAGGCAGTAGTATATGAAAGTGCAT 8548175 37 94.6 36 ...........T.......T................. GGAAATATTAGCCATCTCGTGCTTAATGTTGTTAAG 8548102 37 94.6 35 ...........T.......T................. CTTGATTCTTGTATGGTCAACCAACTTGTATTGTG 8548030 37 100.0 35 ..................................... GGTACAAGCTGGACAGAGCTTCCACCGTTGTACTA 8547958 37 100.0 38 ..................................... TCTCGCATTGTGCAGCCGTGAGCTGCACTGTACTTTCG 8547883 37 100.0 37 ..................................... ACATAAAAGAGAAAGGCGCTAGAATAGAGAGGATGGC 8547809 37 97.3 37 ...........T......................... TAGACAGGTTCTGGAACATTGCGCGGAATATAGAGCA 8547735 37 94.6 36 ...................TC................ GGGTGTTCTTGTTCTCCACCAGGATCAGACCGTGCT 8547662 37 100.0 37 ..................................... TTCCTGGCGCTGGTAGGGGTGGCTCTGCTCTTTCGTC 8547588 37 94.6 37 ...................TC................ GCTTTCCTATCAAGGCAGCTATCTGTTCAATAGTCAG 8547514 37 94.6 37 ...................TC................ AACCTTGCTTAGGACCTCATGTGAAGTATCTGGCGTT 8547440 37 100.0 38 ..................................... TTGCATTACAATGTAGTAAAAGCTGTTCTCGAAGAATA 8547365 37 97.3 0 ................................A.... | ========== ====== ====== ====== ===================================== ====================================== ================== 15 37 95.9 37 GTTACAGAGGCGTGATCCGGTCTGAGGATACTGCAAG # Left flank : GCGTTATTGCCCCTTCAGCCCTGGCCTGGTTGTGCGGGGGCGAATGCTGATAATTGAACTCGTTAATCCGCTCGTTTAGATACGCAGCAAATTCAGGCTCTGCTTCAAACGAAGTCTTGAGCTGGTAATCCATAGATGGTTTCTTTGATCCTTCCATGATCTTATTCTATCACTCTTTACTTGCTATCATCCAGGTTCACAAGGGTATAGCCAGGACTTTCCCATTCTGGTTTTTCCCACCTCACTACTATTGGGCAGGAAGAGGTACGCTGGGGCTCGCGCCCCAGGCCCTCGGTTAAGGGCAGGCCCTTAACAATCCCTTTTTTGGAGAGTTGGAAAAACCTATCTTTGGACAAAAAACGATTTTCGAAACTGGCAGTTCTATGTTATACTGAAAAGTGGAAGCGGCTGGGAACACACGGCGCTACAATGCCCAGGAAAGGGTCTTGGGCGTGCAAAATGGGATAAACATATTCCCACCTGCGCAACAACAGGCCCCG # Right flank : CGCATTTGGGGATGGATTGCGCTCTAGAGCTTTCCTAACTCTCTTTAGCGCTTTCTAGCTTTCATAAAAAAGGGATTGTTAAGGGCCCTGCCCTTAACCGGGGCCTGGGGCGCGAGCCCCAGAGTCTCCTCACTAAATAAGCGAAAAGCCAGCTCCCTACCTGGAGCCTGGCCAGGCCTTCATAGTAGTGTCCACGATCGCCAGCAGAGCCTCGCGAGAAGCCCCATCATTCGCCTCGGAGGATAGCCCTCGCAACACAGCATAATAGAAATTGGCCAGCACCTCCACATCGCAGCCCGGATCAAGCTCACCGGCAGCAATACCTTGCTGAAGACGTTTCTTAATGCGCTCCTTATGTTCTTGCCGGCAAGCTCGCAAATAGTCCTGAATAGCAGTATTCCCTGGCGAGCTGCCCTTGGTTCCCAGATCAATTAAGCAGCCCCTGGGCTGATCCGGCGTGGTATAGCTGATGGCCGCACCCCGCAACAGAGCCTCAATAG # Questionable array : NO Score: 2.57 # Score Detail : 1:0, 2:0, 3:0, 4:0.80, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.51, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTACAGAGGCGTGATCCGGTCTGAGGATACTGCAAG # Alternate repeat : GTTACAGAGGCGTGATCCGTCCTGAGGATACTGCAAG # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [8,9] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-3.30,-4.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-11] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [51.7-43.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,0.74 Confidence: LOW] # Array family : NA //