Array 1 168459-167568 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABWDD010000007.1 Bacteroides ovatus strain F12 NODE_7_length_191103_cov_109.919277, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 168458 47 100.0 30 ............................................... GCAAAAGGTAGCAATACAACTGATGATGAC 168381 47 100.0 29 ............................................... AACCGAACAGAGACTATATGGTAACCGTA 168305 47 100.0 29 ............................................... CGCTTAATGCAGTTTTTCCAGTTTCATCT 168229 47 100.0 30 ............................................... ACGAACATGTAATACGTTCGGAAGATTAGT 168152 47 100.0 30 ............................................... TAGAAATCCAAGAGGGTGAAACAATTGAAA 168075 47 100.0 30 ............................................... TGAACTTTTGGGTACAAACAAGATTTGACA 167998 47 100.0 30 ............................................... AACAGAATGTAGACTATATGGATACAATCT 167921 47 100.0 30 ............................................... CGGTACTCTCTACGATCCCTAACGCACGCA 167844 47 100.0 29 ............................................... ACTTAAAGAAAAGACAATTGACAACAAAA 167768 47 100.0 30 ............................................... TATCCGAAACAGGATCATAATCAACACCTA 167691 47 100.0 30 ............................................... TATCCGAAACAGGATCATAATCAACACCTA 167614 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== ============================== ================== 12 47 100.0 30 GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGGAACAAT # Left flank : ATTAAGTCTAATGCTCACAAAAAGAAACTTAAAAATACTTATACGAAAATGACAATCTTTAAATCACAAGAAATAACATGTTTATATTAAAAAGAGATACATGAATGGATTGTGATTTACTTTTAAATTAGTAACTTTGAACCATTGGAAACAATAGAAATTAAAAAAAAGTCAGCCAGCAGAGTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGGAACAATTTGACGGAGTAGAATTGAGTGCCGGAAAGTGTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGGAACAATTTATGCTGAATTAGCTGCTCTTGCTTCTGAGTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGGAACAATGCAAAAGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATGATGAC # Right flank : ACATTTCATATAATAAGATGTAATTCAATTAGTTACAAAGAAGATTAGAAAAGAAAAAAGAAGACTGTTCCCAACACAAAATCTCGCATTAATGCGAGATTTTGTGTTCTAAAACAATTCCAATTGCTGCCCTGGTGTATTGACACTCTGCGCCTTCTTTCCATAGAAAAGTTCTATGTCCCCAAATTGTTTATCCGTAATACACATGACTCCGACATGCCCTAGTTCCGGAAGGAAAGATTTAACTCTTTTTATATGTACTGCTGCATTCTCGCTACTAGCACAGTGACGTACATAAATGGAAAACTGAAACATCGTAAAACCATCTTTTTGCAGATTCTTTCTGAAATCCGCATAAGCCTTCTTTTCCTTCTTCGTTTCAGTTGGCAAATCAAAAAGAACGAGCACCCACATTATACGATATTCACTAAGACGATCCATTACCGTTCGGGATAGGCAACTCGGCGAAGCTCTCCATTGAAACATTTATAAAGTGAGGC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGGAACAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.09%AT] # Reference repeat match prediction: R [matched GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGAAACAGC with 98% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.40,-2.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [80.0-8.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.64,4.5 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], // Array 2 168851-168575 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABWDD010000007.1 Bacteroides ovatus strain F12 NODE_7_length_191103_cov_109.919277, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 168850 47 89.4 28 A.........A....T.........A..............A...... AGAAATTAAAAAAAAGTCAGCCAGCAGA 168775 47 100.0 30 ............................................... TTGACGGAGTAGAATTGAGTGCCGGAAAGT 168698 47 100.0 30 ............................................... TTATGCTGAATTAGCTGCTCTTGCTTCTGA 168621 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== ============================== ================== 4 47 97.3 30 GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGGAACAAT # Left flank : AGGATCTCCTAGATGTTTTGTTATAATCTTATACTGTTTCATCGTCAAATAACGATGATTATACGGCATATAACCAGTCGGTACAAGCTCTTTGGTCAACGGGTTACAGTCTTTAATCCATCGGCTCAGACAACGCACTGCATTTTTACTGGTCGTACATCCGGGGAAGTACAATGCAGCTAATACAGCAAAAGATAAGATTCGTCTCATTTCGTTTTTAAAGTTTTAATTTGTCGTTTCATTGTTTCTTTCGTTCTACAAATATACAACATCAAAAAGCGTTTGTCAAGTCATTTGGGATTTTATCGTTAATATAAAGGAATACCCACCTTTATTAACCCAATTACTAAGCAATTGAAACAGATTGAGCATTCTCAATATTTAACGCTAGAATTAAGTCTAATGCTCACAAAAAGAAACTTAAAAATACTTATACGAAAATGACAATCTTTAAATCACAAGAAATAACATGTTTATATTAAAAAGAGATACATGAATGG # Right flank : GCAAAAGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATGATGACGTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGGAACAATGCAAAAGGTAGCAATACAACTGATGATGACGTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGGAACAATAACCGAACAGAGACTATATGGTAACCGTAGTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGGAACAATCGCTTAATGCAGTTTTTCCAGTTTCATCTGTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGGAACAATACGAACATGTAATACGTTCGGAAGATTAGTGTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGGAACAATTAGAAATCCAAGAGGGTGAAACAATTGAAAG # Questionable array : NO Score: 5.72 # Score Detail : 1:0, 2:3, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGGAACAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.09%AT] # Reference repeat match prediction: R [matched GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGAAACAGC with 98% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.40,-2.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [6.7-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.78,4.77 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //