Array 1 2832-880 **** Predicted by CRISPRDetect 2.4 *** >NZ_VLHQ01000076.1 Lacticaseibacillus paracasei strain DPC 7150 NODE_76_length_9365_cov_17.1254, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 2831 36 100.0 30 .................................... ATATATTTGCCATTACCCGCAACTTCTGAT 2765 36 100.0 30 .................................... GGACGGAAGAAAGCATAAGCCTAGTGAAGC 2699 36 100.0 30 .................................... CTGCTTGATCTGCCAATGTGTCTAGTATGT 2633 36 100.0 30 .................................... GAGTAGAATTGTCGAAGTGCCAACAAGCCT 2567 36 100.0 30 .................................... ACATTATCGAGCCGCGTATACTATACGGTT 2501 36 100.0 30 .................................... TATCATATGCGTTATGAGAACGGCCGTCTG 2435 36 100.0 31 .................................... GATGCGACTCACGCCAGCAATCAAAGCAAAG 2368 36 100.0 30 .................................... TTCGCGCTCGGTTGGGGCGGCTCGGGACAA 2302 36 100.0 30 .................................... GTCCCGCTGGCAATTCTTCTGCCAGTATGG 2236 36 100.0 30 .................................... TTTTGATCCTAACGCAGACCCGTCTATAAT 2170 36 100.0 29 .................................... AAATCAATATGGTCAACCACCACTTTTGA 2105 36 100.0 30 .................................... CATCAATGGCCCCAATGATTGCTTCTTCTG 2039 36 100.0 30 .................................... TTTGGCGTCCAAAAGGCCGATAGCAATGCC 1973 36 100.0 30 .................................... ATCAATATACGCGATAAAAAGCGCATGGCC 1907 36 100.0 30 .................................... ACAGTGCAGATTAATATCGATCTGGATTCA 1841 36 100.0 30 .................................... CACCCCAGATGGTTGTTGTCACACGGCATA 1775 36 100.0 30 .................................... TGTATTGCTGCAAAAGCCAACTAGCTTACC 1709 36 100.0 30 .................................... CAATGCCTTTGTTAAAATGGTGAATGATGG 1643 36 100.0 30 .................................... GCCTTCTATAATTCCCTGAACTGTTGACCT 1577 36 100.0 30 .................................... CAGTACGGAACCTAACCAGCGCATGGAAAA 1511 36 100.0 30 .................................... GATACAATCGGCAAGCGGAATGAGTGACCA 1445 36 100.0 30 .................................... ACGTCATAAGCGTACCTTGTCCCTGAATCA 1379 36 100.0 30 .................................... TCTGATGTACGCATCATTTACCCTCCATAC 1313 36 100.0 30 .................................... TGTCACAAGTAAAACTCTCGTCATTAGTGC 1247 36 100.0 30 .................................... TATTGAAGGAAGTAGTTAAGTCCTTAGGAC 1181 36 100.0 30 .................................... GATTATACGTGGAATAGCACATGCGTGTGA 1115 36 100.0 30 .................................... AGCCAACAACCGCAGCGCTGGTGCTAGGGG 1049 36 100.0 30 .................................... GGGTAGCTTGGGAAGTATTACCAGTAACTA 983 36 100.0 30 .................................... CAAGTTTAACCATGAAAGTATTTCTGATGA 917 36 86.1 0 .....................C.CT...G..T.... | GG [896] ========== ====== ====== ====== ==================================== =============================== ================== 30 36 99.5 30 GTTTTAGAAGGATGTTAAATCAATAAGGTTAAACCC # Left flank : TAGTGATGGGGTGAGTGAAAAGTATAGTTCCGGGATTTACAAGCAACTTGAAGCTGTATTGACTGATGATCAGCGTAAATCCATAACTGACATGAACAGTCAGTTATATACCCTTGTTCAGCAATGCTTATTCATGATTGATCTACCCTTGGAAGTCACTTATGATTGGGATTTAAAGAAGTTGTTCAAGTACTGCAAAATTCATTTTAATGCTGATACCATGCAGAACCCATATGCTATAATTGAATCAATTATTAAAATTCATTTAGAGTGTGGACTCAAGTCTGCGGTTGGATTAACTAATGTCGCTCATTATCTTAATCAGCAGCAAATAGCTGACTTATCCAAGCTCACAATTTCCACGGGGATCTCGACATTATTAGTAGAATTCACAGATATGAAGTCACAGGAGCTTTATACTAATTGCGACTTCTACTACATTGACGAGGACTTTGTTGATTGGCATTCATAGTACATTAAAATCCGGTTATAAAAAATCG # Right flank : TAGTGGCCTTTTTTGATTCTGTGCTATACTAGGAATTACAAATGTTCATTAGAACTGTCCAAAAGGAAGCGCTAAAAATGGCTAAAATCGGGTATGCCCGGGTAAGTTCCAGAGAGCAACATTTAGATCGGCAGTTAACGGCTTTAAAAAACGTTGATAAACTGTTTACGGATAAATTAAGCGGGGCCACCACGAATCGGCCAGAACTGCAAAAAATGTTGGCCTATATTCGTGAGGGTGATATTGTCCTGGTCACTGAATTAGATCGCTTAGGCAGAAATAACCAGGATTTAACTAAGATCATGAACACCATTCAAAATAAGGGGGCCACCCTAGATGTGTTAAATTTGCCGTCCATGACAGGGATTGCTGATCCTAACTTGCGTCAACTGATGACTAACCTCATTATTGAACTGTATAAGTATCAGGCTGAAAGCGAACGTAAGCGAATCATCGAGCGTCAGCAACAAGGGATTGCCCTCGCCAAACAGCAGGGTAAA # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAAGGATGTTAAATCAATAAGGTTAAACCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-1.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA //