Array 1 2389861-2386122 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP018760.1 Maribacter hydrothermalis strain T28 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================================== ================================================================================ ================== 2389860 45 84.8 80 .....T..C.-.GG...A..T......................... GAAGTGATATATATCATTCTCGAAAGAATCGTTGTGAATTTCTTTATTCATGCATGTCTATTTTTTTAAAAAGTATTCAT T [2389856] 2389736 46 80.4 30 CGGTC.CTA....C................................ CACCTATAACGTATTCCGTTCTTGGGTCTG GG [2389721] 2389658 46 100.0 30 .............................................. GGGCAGAGACCATTCTATAGAGTCAATATA 2389582 46 100.0 30 .............................................. CCCCCGTTTGTAACCAAGGAATTTGTAGTA 2389506 46 100.0 30 .............................................. ATGTATAAGGACAGGGCAACGGGCGAAATA 2389430 46 100.0 30 .............................................. ATAAGACAGACCCCTGTAGATATAGTAGGT 2389354 46 100.0 30 .............................................. TGAGGATGCTTTACAGATGGGATTGGTTGA 2389278 46 100.0 30 .............................................. AAGGAACTGAAAATATTGGAACTACTTCAG 2389202 46 100.0 30 .............................................. GAAGATTTAGCAAGGGTAAACACAACTATA 2389126 46 100.0 30 .............................................. AAAGTGCCTGTATGTTCGTTTACCTCGCCA 2389050 46 100.0 29 .............................................. TTCCTCGTTGATATCCAGTGCAGCGTCGG 2388975 46 100.0 30 .............................................. AGAGCAGTATATATGCTATGCACATGTAAC 2388899 46 100.0 30 .............................................. TATCGCTCTTTGAGCCTGTTTGTAAAAAGT 2388823 46 100.0 30 .............................................. CTAAGCATATAAGAATAGCAATATCAGGTA 2388747 46 100.0 30 .............................................. TGGACCATGTTTCTAATCTAGGTGGTCTTC 2388671 46 100.0 30 .............................................. TAGTGTAGTTCTCGTTATAGTTGACATGAA 2388595 46 100.0 30 .............................................. AACGCGTAGTATGCCCGCACTGTCCGTTAG 2388519 46 100.0 30 .............................................. GGACTTGCAGAAGTAGGTGTTAAACTACCT 2388443 46 100.0 30 .............................................. GTTCTGCTAAATTCAACTTCTACGTGCATT 2388367 46 100.0 30 .............................................. GTACTTGATGCAGAACGTGAAGAACACTTA 2388291 46 100.0 30 .............................................. AAGAGAAATTCGGTATACCCATGCGTATTG 2388215 46 100.0 30 .............................................. ACTGATATCGGGTACCAAAGAGTCTATGCA 2388139 46 100.0 30 .............................................. TTAATGCGGACAGTTGCCGCACGGCACTCA 2388063 46 100.0 29 .............................................. TCGGCTACGCTCAACCACCGGTAGAATTA 2387988 46 100.0 30 .............................................. TGGTGCTAGTTTCTGGTCTTCTCCAGTAGA 2387912 46 100.0 30 .............................................. CTTAAAGATAGATGACCAAACTTTGGATAG 2387836 46 100.0 30 .............................................. TTATTGGTTAAGCGGTCGTTGGTGCGCATT 2387760 46 100.0 30 .............................................. ACCCGCTTCCCAAGCTTTTGTCCATTCGCC 2387684 46 100.0 30 .............................................. GTGCAGTACCCGTTCTTTTAAAGCAGAACT 2387608 46 100.0 29 .............................................. AATTATTGGTCACCTCTTCCACGAACGCC 2387533 46 100.0 30 .............................................. CGGGCAGAATGTCTTTATACCTTTTACCGT 2387457 46 100.0 30 .............................................. TTGCACTTGGCCCAATCATTTCAGTATCTT 2387381 46 100.0 30 .............................................. TTTACGACCTCGCTTACCCGTAGGCCGCAA 2387305 46 100.0 30 .............................................. TCTTTATCGACTATGATGAACTTCCATCCT 2387229 46 100.0 30 .............................................. TAATCCATCATTATAATTTCACCTGTATCA 2387153 46 100.0 30 .............................................. AGCTGCGTGAAATTATTGGTGTAGGTAATA 2387077 46 100.0 30 .............................................. TTAAACAAAGCGTTATAAAAAGAAATATTG 2387001 46 100.0 29 .............................................. TTACTATTTATTTAATTAATTATATTTCC 2386926 46 100.0 30 .............................................. TTGTAATTAAATCTTATATCAGTTCTACCT 2386850 46 100.0 30 .............................................. CCCTCAAATCAACCGCCATTATTGAAACAG 2386774 46 100.0 30 .............................................. GAAGTTCTTAGGAGTATTGTGTACAAGTCT 2386698 46 100.0 30 .............................................. TGTATCGCCTAAAAAGGCGATCCCGTACAT 2386622 46 100.0 30 .............................................. ATAACCTTAAACCGAAAAGTAAACATAGTA 2386546 46 100.0 30 .............................................. GATATTTATAAGTCATAAACCTACAGCAAA 2386470 46 100.0 30 .............................................. CTACCAAAAAATAAAGCAGCAGCAGCAATA 2386394 46 100.0 29 .............................................. TCAATAGCTACTTCCTTCCCCTTGCCTAC 2386319 46 100.0 30 .............................................. GTATGTACGAGTTACACAACCAACAACAGC 2386243 46 100.0 30 .............................................. CCAGAAGATGAGCGAAAAAACGGGACTTAT 2386167 46 100.0 0 .............................................. | ========== ====== ====== ====== ============================================== ================================================================================ ================== 49 46 99.3 31 GTTGTGAATTGCTTTCAGTTCTTTAATTTTATTGATGATTCACAGT # Left flank : ACAGACAAAAAGCTTTTGCAAATTTTTAAAAATTTATTGCTCACTATGGCCTTTAGCTCACTATGGGTTCTATTTTCAACAAAAACATCTTTATACTGGTTTAGTTCGGTCTTTAAATCATGAACCGACTGTTTTAATATCGTATTAGATGTAGTTACTTCGGTTTCTATCATAGAGATTGTAATTTAAAACAATTGATGTGAAATTAACAATTGACATTCGTTGCGTTATACGTGGTTTTAAAAAATCGCTAAAAAAATATGCGACATTATAATCTTTTTAATCGTTAAGATATTGAAATTCAACAAAAGAATTGAAATTCTTAATAACTAAGAGTAGTTGTAAAAGGCGCTGAAAATCTAGAAACCCTAGACATTACTGGGGCAATTGTGGCAAAAACTTCTATTTTTCTAGTGGTAAAAGACATTTCTCTATTAAACTGACCAAGTTTTAATGCCATAAGAGTTTCAATAACGACATCAGGCTCGGTATTCATCGGT # Right flank : ATACCGGTCATAAAACACTGGTATACTGTTTATTAACCTCTTATTTAGGAATATAAAATAAGCGGATTTTCTTTTGCACTTAGTATCAGTGCTTCCCTTTTTTAAATTCAAAAAAGCTCTAGTTGTTGGCTTGGGGTCTCTGGAGTCTGTACTTTTTGACCATGAAACAATTCGATCATTCCAAATTGCTTATCGGTTATTTGCATAATCCCTACTTTACCTTTTTTTGGCAAGGCATTTTTAGTACGCCTTATATGTACATAGGCATTCTCCCTACTTGGGCAAAAACGCATATAAATACTAAATTGAAACATGGTAAATCCGTCGTTAAGCAACTCTTTTCTAAACCTGGCGGCATGTTTGCGTTCAGTGGCGGTTTCCGTTGGCAAATCAAAAAAAACAAGTACCCACATGCTCCGGTATTGGTTAAGGCGTTCAAATCTATTTTTACTCATAAAACACATCTTGTTTGATGTTGTTTAACAGCGAATTTTAACCTT # Questionable array : NO Score: 6.15 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:-0.06, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGAATTGCTTTCAGTTCTTTAATTTTATTGATGATTCACAGT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:71.74%AT] # Reference repeat match prediction: R [matched GTTGTGAATTGCTTTCAGTTCTTTAAATTTATGGATGATTCACAGG with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-0.20,-3.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-19] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [73.3-60.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.68,4.87 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //