Array 1 2230020-2229655 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP016784.1 Bacillus pumilus strain PDSLzg-1 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 2230019 32 100.0 35 ................................ CTACCGCTATTTGCAATGTCCGTAAAGGCGTATGG 2229952 32 93.8 34 .............CT................. CTTCTCTGCTTTTGGGGTGTATTTAAAAGTTGTA 2229886 32 100.0 35 ................................ ATTTTTTCGAACACCTCGTCTAGCGTTGCCTTTGG 2229819 32 93.8 36 ...........C......A............. ACATAATATTGACCGCTGTTTTTCACAATGGATAAT 2229751 32 93.8 34 ...........C...................G TATGTATTCAATTGACTAATGCTCAATGTTTGAA 2229685 31 81.2 0 ...........C.......TA......-..GG | ========== ====== ====== ====== ================================ ==================================== ================== 6 32 93.8 35 GTCGCACTCTATATGAGTGCGTGGATTGAAAT # Left flank : GCCTGAGACAGTAAAGGGAGCATTCAAAGTAGATGTGATGACACCACATCATTCAGACTACAACAGCGTCAAGCTAGATAAGATGAACAAAGGGGGAAGTGTTCCAGCCCCTCGAGACGATGACTCACCAACACCGATTCATTTCTTAACGGTGGTCAACGGCCGCTTTCAACTTCTATTAAAAACAAAAAAGAATCTACCAGAAGATGCGGAATGGCTCGAACTCGCCAAAACCATCTTACTAGGAGCTTTAGAACACGAAGGAATCGGTGCTAAAACAAATGCAGGTTATGGAAGACTTAAAATGGACGACGTCATTTCATAAGACTAAGTGCGAATGTGAGGTGAACATAAAATCCCTGGAACATTCGCACCGTTTTATTCGAAAAAAATGAGAAAAAATGTATATTTTTTAGGTGTGAAAACAAACTTCTATATAGAAACTTAAGGGTTTTGACGATTATTCCCTAAAAAATGTTATAATTAGGGCGAAAATCGCA # Right flank : TAGCTTGAAAAAAATGTTGACAGTTGCGCTTGATTTAGGGGTGAAAAACATGACTCTAGCTCAGTAGTCATGTTTTTAAATGAATTCAAAATTGTTGATGAAATAATGAAATAAGTACCTTTAGAGCAATAGTTTCTAATTAAATAGGATAATAAAAATTTGGTGCGAATGTGAGGTGAACATAAAATCCCTGGAACATTCGCACCTATTCATTCGACAAAAATGAGAAAAAATGTTATAATTAGGGCGAAAATCGCAGTCGCACTCTATATGAGTATGAGGTATAAAATTCTTATCAGAAGGTAGCTTGAAAGATATATTGACAATTGCGCTTGATATAGGTGTGAAAAACATAACTCTGTCTCAGCCATTTTATTAATGAATTCAAAGCTGTTGATGAAACAGCGAAATAAGTATGATTATCATCAGTAATAGTTTTTTTAAATAGGATTAAGAAAGATTCGTGCGAATGTGAGGTGAACATAAAATCCCTGAGGCAT # Questionable array : NO Score: 8.64 # Score Detail : 1:0, 2:3, 3:3, 4:0.69, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTATATGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:54.84%AT] # Reference repeat match prediction: R [matched GTCGCACTCTACATGAGTGCGTGGATTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.60,-3.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [61.7-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9.78 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 2238870-2238707 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP016784.1 Bacillus pumilus strain PDSLzg-1 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 2238869 32 100.0 32 ................................ GCGATAATGGCTTTTTTCGACCATTTTTCTGT 2238805 32 100.0 35 ................................ ATTTCATTTTCAAGCTTCACCCAATGGCAGCCGCG 2238738 32 87.5 0 ...................TA........GG. | ========== ====== ====== ====== ================================ =================================== ================== 3 32 95.8 34 GTCGCACTCTACATGAGTGCGTGGATTGAAAT # Left flank : CCATATAGAAAATTGAGGGTTTTGGCTATCATTCCCTAAAAAATGTTATAATTAAGGCAGAAATCGCAGTCGCACTCTACATGAGTGCGTGGATTGAAATTAATTTTCCATCCTCAATACTAGACTCTAATTTTGTCGCACTCTACATGAGTGTATGGATTGAGGTAGCTTGAAAGAAATGTTGACAGTTGCGCTTGATTTAGGTGTTAAAAACATGACTCTGGCCCAGTAGTCATGTTTTTAAATGAATTCAAAGCTGTTGATGAAACAGTAAAATAAGTATGTTTTCAAGAGCAATAGTTTTTAATTAAATAGGATTAATAAAAATTTGGTGCAAATGTGAGGTGAACATAAAAACCCCGGGACATTCGCACCTTTTTATTCGACAAAATTGAGAAAAAATGTTTATTGTTTAGAGGTGAAAACAAAATTCCATATAGAAAATTGAGGGTTTCGGCTATCATTCCCTAAAAAATGTTATAATTAGGGTAGAAATCGCA # Right flank : AGCTTGAAAGAAATGTTGACAGTTGCGCTTGATTTAGGGGTGAAAAATATGACTCTGGCTCAGTAGTCATGTTTTTAAATGAATTCAAAACTGTTGATGAAATAATGAATAAGTACCTTTAGAGCAATAGTATTTAATTAAATAGGAATAAGAAAAATTTGGTGCGAATGTGAGGTGAACATAAAATCCTCGGGACATTCGCACCTTTTTATTCGACAAAAATGAGAAAAAATGTATATTATTTAGAGGTGAAAACAAAATTCTATATAGAAAATTGAGGATTTTGGCTATCATCCCCTAAAAAATGTTACAATTAGGGCGAAAATCGCAGTCACACTCTACATGAGTGTGTGGATTAAAATTTGTGTCTGTTTTTTGGTTAACTTCTCACCAGGAGTCGTGCTCTACATGAGTGCTTAGCTATTCTTGGTTTTAATAAGAGAAAACAAAAGCATTTATGTTTGATTCGAAAATTATTAGTGGAGTAACTATACTGATTA # Questionable array : NO Score: 8.15 # Score Detail : 1:0, 2:3, 3:3, 4:0.79, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTACATGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCACTCTACATGAGTGCGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [61.7-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.5 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //