Array 1 23159-25750 **** Predicted by CRISPRDetect 2.4 *** >NZ_SPNN01000016.1 Streptomyces sp. 4R-3d NODE_16_length_191568_cov_195.645786, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 23159 29 100.0 32 ............................. CTACTATCGCCCGCTCTCCCGCGTTAGCCAAG 23220 29 100.0 32 ............................. CACCAGCCGCCCGGCGCGATGAACGTGTCCCA 23281 29 100.0 32 ............................. TGGTTGTAGAAGGCCCCGACCGCGCGGTGCGG 23342 29 100.0 32 ............................. TGCTCCACGGGCGGCACGGGCACGTCGGACAA 23403 29 100.0 32 ............................. GTGGACGAACGGCCGTTCCTCGGCGTCGAGGA 23464 29 100.0 32 ............................. TTCCCGCGCGTGGTCCAGGTGCCGTACGGCTC 23525 29 100.0 32 ............................. CTCGTCAAGGCCCGCCGCCGCCAGCCCAGCCC 23586 29 100.0 32 ............................. ACCGGGCAGCGGCCCACTACGGTCTCGCCCCG 23647 29 100.0 32 ............................. ACGGCGTGGGACTGGTTCGCCGCGTCGTTGAA 23708 29 100.0 32 ............................. GGCGCCGACGCCAACGCGATCGAGGCGTACGA 23769 29 100.0 32 ............................. TCCCCACCCGTTGCAAGCGAATTGCTTGCCCA 23830 29 100.0 32 ............................. TGATTCGAGCCAAGCGGCATCCCGTAACGGTC 23891 29 100.0 32 ............................. ACGATGATCTCGCCGGGGACGGCCAGGACGAC 23952 29 100.0 32 ............................. CTGCGTGGCCGCCAGCTCCGCATCGAGGCCGG 24013 29 100.0 32 ............................. AGGCCCATGCCGCCGGCGTAGCGGGAGACCCT 24074 29 100.0 32 ............................. GGGACGCTCAGGCTGGCCAGGTACAGGTCACG 24135 29 100.0 32 ............................. GGGACGCTCAGGCTGGCCAGGTACAGGTCACG 24196 29 100.0 32 ............................. GTCCTGCGAGACGCGACTGGTGAAGTGATCGA 24257 29 100.0 32 ............................. TTCCGTGCGGTCGCCTCGATCATGCGGTCGTA 24318 29 100.0 32 ............................. CCGACCAGCCGCACCCACCCAGAGGACCCCGT 24379 29 100.0 32 ............................. CGGCTGTACGTCCCGCAGGCCGGCCGCGGCTA 24440 29 100.0 32 ............................. TCCCCCACGTCACGCTCCAGATCGTCCTCATC 24501 29 96.6 32 ............................A AGGTCTGAATGCGGGCCGCGCGTTTCTCGGCG 24562 29 100.0 32 ............................. TCCCTGGGATCCCGCGCTCGACGGTGGGCCTG 24623 29 100.0 32 ............................. GACTTCTACACGGTCGGGGACGCGCTGAATCC 24684 29 100.0 32 ............................. GTGCAGGCGGTCTTGGGACAGCGGGGGGCGAA 24745 29 100.0 32 ............................. TCAGCCCCCGCCCGAAGTGCTCGGGTCGGGGG 24806 29 96.6 32 ...........T................. GAGAACCGACGCAGCGGCTTGGTGCCCTCCTG 24867 29 100.0 32 ............................. TCGCCGAGCACATGCTGGGGGTGACTGAGGAA 24928 29 100.0 32 ............................. TCAAGGGCGGTGGTGGCGTGCCCGTACTGGTC 24989 29 100.0 32 ............................. GCGATAGCGCACGAACTCAATCTTCACGGCGC 25050 29 100.0 32 ............................. TCGGGGCGCATGATCGCCTCGCCGCCGGACAG 25111 29 100.0 32 ............................. CACCGGCAGGCGTGCATAGACCCCTCCATCGA 25172 29 100.0 32 ............................. TTTCAACGTCTGCTCTAGCCTGGCCCGCTGGT 25233 29 100.0 32 ............................. TCCTCGAAGCCACCATGGCCGTCCAGTTCGGC 25294 29 96.6 32 ...........A................. CTGGGCCTGGAATAGATGGGGGCAGTAGCGTA 25355 29 100.0 32 ............................. TGCGCGCAGCCGAGGCCGCTCGGGTTCGTCGT 25416 29 100.0 32 ............................. CCTCGACATCACTTGACGCATGCGTTTATTCC 25477 29 100.0 32 ............................. GCGTGCGCCGGCTCGGGTGGTGGCTGCCCGAT 25538 29 100.0 33 ............................. GCGTCACCGCCGGGCGCCAGTTCGGCGCGGTGG 25600 29 100.0 32 ............................. TGGCGCGCATTGTCGACGCGTCGGATCCGTGT 25661 29 100.0 32 ............................. TGTCTGCGCATGAGCCCGACACCGGACGCCCC 25722 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================= ================== 43 29 99.8 32 GTGGTCCCCGCGCCTGCGGGGTTGGTCCC # Left flank : GCGGCGAGATCATCTGGTGACCGTCATCGTCCTCACCAACTGTCCCCCCGGCCTCAGGGGTTTTCTCACCCGCTGGCTCCTCGAGATCTCCCCTGGCGTATTCCTCGGCGCCCCGTCTGCGCGCGTACGCGAAATCCTGTGGAACGAGGTCCGGGAGTACGCCGGCCAAGGCCGTGCTCTGCTCGCCCACCAGACAAACAACGAACAGGGCTACACATTCCAGACGCACGACCACACCTGGCACCCCACGGACCACGAGGGCCTCACACTGATCCACCGCCCAAACCTCAAGTCACCCAATCAGGCAGAGAGAACGCCCGAGGCCCCAGGCCAGGGCTGGAGCAAGGCGTCCAAGAGGCGGAGGTACGGAGGCAAATAGCCGAGCGGGTTTTCGAGAGCAAGGAAGGAGGTCCAATATGCAAAGAAAGGGCACTATGTCGATTTCTGCGAAAGTAAGCAAAAGCGGGCGCCCTCCCTACTAAAACACCAGGTCAGATCCT # Right flank : CACTCAATCCCAGTGCGGAGACCATGCGGCGGGCTGCAACAGGATCAATCAGGCCAGGTCAGCGCACCCGGCCACGTGGTTTCAGGGCTACCGGCGGGAGTTCCGGGGCGGGGAGGCGCGCGCCGTCGTAGCCCGTCACTTCGCCGAAGCGGGGTCCTCCATCCAGTCCTCGCGAGCCGCCTCGATCTCCTCGTGGGAGCGGCCGACGAAGGTCCACCACAACTTCGTCAGCGAAGCCTCCACGTCCACGGCGCCAGGCCACGAGTTCTGTTCAGCGCTCCCGCGGAACACATAGGAACCGTGGACGGTCGGAGGCAAGATCCGGACCATACGCGGGCCAACCTCCCGCCGCCCGCGCTACCAAATGCCAACTTTCCTGGTCAGGACCGGTACGACAGGTGTACCACCAGCAGACGAAGAACCTGCTGGTGTCGTACTCGCCGAAGAGGCTGGGCTTCTTCTAAGCGCCAAGGAAGGGCACCTGACCTGGGCGGATGCCC # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGCCTGCGGGGTTGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [0,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGGTCCCCGCGCGTGCGGGGTTGGTCCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.30,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [50.0-40.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.18,0.74 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //