Array 1 749753-744966 **** Predicted by CRISPRDetect 2.4 *** >NZ_LMLF01000001.1 Sphingomonas sp. Leaf42 contig_1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 749752 29 100.0 32 ............................. TGTGCGGAGGCAGGAGCCGCCACACAGAGAAC 749691 29 100.0 32 ............................. CCTACTCCAAAGAAAGCGAAGGTCATCCAGAT 749630 29 100.0 32 ............................. GCGCAATTTTCGTCGGAGACTTCGTCGCCGGC 749569 29 100.0 32 ............................. TGGGTTGGCATGAATGGCGGGATTCCTTGCAA 749508 29 100.0 32 ............................. GAGATCAGCCCGTTCGGCACGTCGGTGATGAT 749447 29 100.0 32 ............................. CCTGTTGCATCACCGGCTTTGCGCGCGTGCAG 749386 29 100.0 32 ............................. CGTCAGTTCGGCCGCGAGATCGACGTCGCCGG 749325 29 96.6 32 ............................A TGATCGGCAAGCCGTGGGAAGCCGTCGAGGAT 749264 29 100.0 32 ............................. GCCTGCTCGTGGCCGCGCAGCGGTTCACCGGC 749203 29 100.0 32 ............................. GCGGCCGCGCCATGGTCGGCCGTCGAAGGATC 749142 29 100.0 32 ............................. CCGAGCGCGACGACTTCCGTGGCATCTCCCTC 749081 29 100.0 32 ............................. CGGTCGCCGCATTTTTCGTCGCAAAAACGCTT 749020 29 100.0 32 ............................. ACTGACACCAGCAATTTTCGGCGCATCGCGTC 748959 29 100.0 32 ............................. GTCCTCTAATGACACGATCCGATTCACTATGT 748898 29 100.0 32 ............................. GGGTTGTTGCTGCCCGGCGATTCGGCGTCCGT 748837 29 100.0 32 ............................. ATCAAGGTCGGCGGCCGAGTGCCGGACTTCGG 748776 29 100.0 32 ............................. GTCGCGCTGACCCCCGCCAGCTTCGGCGACCT 748715 29 100.0 32 ............................. GTGGGTGTCGCCAGCATGGCGGCCGACGTGCC 748654 29 100.0 32 ............................. CTTGCGTCGCGGCTGACCAAGCTGATCGAGGC 748593 29 100.0 32 ............................. GGCGGCCTCGACGGATTCGACTGGCTCGCGAT 748532 29 100.0 32 ............................. GTGCAGCAGTCGTGCGCGCCCCAGGCGAAGGC 748471 29 100.0 32 ............................. TGTTCGGTCGCTTTGTCGCCGGCGGCGTTGAC 748410 29 100.0 32 ............................. TCGTAATTCCGAGCGCGACCACGGCGCAGTTG 748349 29 100.0 32 ............................. TTTTCAGGGCCGGTAATGGCTGCAAGCTGCAC 748288 29 100.0 32 ............................. CCCTCCCTCCCGCCCCGGAGGCAGCGCGATGA 748227 29 100.0 32 ............................. GTCGGCCGCGTGCAGGCCGCGTTCAATTGCAC 748166 29 100.0 32 ............................. GCAATCGTGGAAGCCGCCGGTGCTTTCGAGGA 748105 29 100.0 32 ............................. GTCTTTGCGCAACGCGGGCTTATGGCTGGCGT 748044 29 100.0 32 ............................. GGAGTCGAGCGGGGTTCCATCCCAGCTTGGCC 747983 29 100.0 32 ............................. GCGACCAGCACCGCCCCGCCGCCGACACAGGT 747922 29 96.6 32 ............................G CTCGACCAGATGGTCAAACAAATTCAGGAAGA 747861 29 100.0 32 ............................. GCAGCACCGGCGATCAGGCCAAGCCCGTAGCG 747800 29 100.0 32 ............................. CGCGATGTAGGTGGCGTGGCCAACAGCAGCCA 747739 29 100.0 32 ............................. AGGGTCGGCAAGATCGCGCCACTGACCTGTTG 747678 29 100.0 32 ............................. GCGTCACGGCTTGGCTGCGGCCATCTTCCTCG 747617 29 100.0 32 ............................. TTTGCTGAACTGGTGAAACTGGCTCGTTCCAA 747556 29 100.0 32 ............................. GTCACGGCGCGTCCGGTGGCCGCAACGCACCA 747495 29 100.0 32 ............................. GGCGACTATGCGATCGTCGAGGTGCTGGGGCA 747434 29 100.0 32 ............................. CCGGGGATCTCCGCGCGTGCGCGGGCTGACCA 747373 29 96.6 32 ............................G TCGGTGGGCGTCACAGGGCCGGTCGATGGCAA 747312 29 100.0 32 ............................. GGCGGACGGCATCGGCAAATGGGCGGTCGGCA 747251 29 96.6 32 ............................T TTCGATCCCTTCTTTCAGGCGATCTGCCGGCA 747190 29 100.0 32 ............................. CGCGAGCGCGACGACTTTTATCCCACCCATCC 747129 29 96.6 32 ............................G GTAGCACGACCTTGTCAGAGCGCATTGAGATC 747068 29 100.0 32 ............................. AGCAGGGTGTCGCCTTTCGCCACCCCGGCGAG 747007 29 100.0 32 ............................. GGCGCAGTCATCACCTACCCGTGCTTCGGGTA 746946 29 100.0 32 ............................. GCGGCATCGGCATCTTGGAGGTCAAGACTGCC 746885 29 100.0 32 ............................. ACCACCACGCCGCGCATCAGGCGGCGGCCTTC 746824 29 96.6 32 ............................G TGGGTGCGCTCGACGTCGTCGGCGGTTTCGTC 746763 29 100.0 32 ............................. CGGGCCTTCGCGTCGCCGCCGGCCACCCGCGC 746702 29 96.6 32 ............................T CTGCTATGGGAGCGCGACCTCTCGCTGAGCGA 746641 29 96.6 32 ............................T CGACTTGTGGGAAGGCGATGCGACCGCCTTCC 746580 29 100.0 32 ............................. AAGGACAAAGACCCTGCCGAAGCAGATGGGCA 746519 29 100.0 32 ............................. TCACGGGCGGCGGTCATGAAGCGCCTCAGGTC 746458 29 96.6 32 ............................G TTCGCCGTCGGGATCCACGAACGTCGCCACGA 746397 29 100.0 32 ............................. CCGCTCGGTGCGGTCGTGCGCTTCGACACCAG 746336 29 100.0 32 ............................. GGGACGGGGCGTTTGGTGTGGGCCACGAGGTT 746275 29 100.0 32 ............................. CAGCTCGACGTCTGGTCGCGCTTTCCCGATTT 746214 29 100.0 32 ............................. GACGGCGACGTCCGTGCCGCGATCGTCGAGTT 746153 29 100.0 32 ............................. CGCTCGGCGATCATTGCGAAATCGAAGGTTTC 746092 29 100.0 32 ............................. GTACAGCACGCCGGCCACCAGCGTAACCTTGC 746031 29 96.6 32 ............................T TCGCCGCAGCGTCGGCGGCCGTCGCGGTGGCC 745970 29 100.0 32 ............................. CGGCGGATGCGGCCGGCACCTTCGTCGACGGC 745909 29 100.0 32 ............................. CACGGCGCACCATGGCGCGGTCGGCTCACGCA 745848 29 100.0 32 ............................. ATGCCGGGTTCCCCCTCGATAGGGATGCAGCG 745787 29 100.0 32 ............................. AGCAGCGCCAAGCCCCGCAGGATGTTCCCGAT 745726 29 100.0 32 ............................. TGCGACGCACCGCCGCCAATGGCTACCCGGTT 745665 29 100.0 32 ............................. GGGCCAGGACAGCGGCGAATATACTCCCACGT 745604 29 100.0 32 ............................. ACGCCCCTCGCTCGCTATATGCAGGAGACGCA 745543 29 96.6 32 ............................A TCGACGAAGCCGAAAGCGCGCTCGCGCGACTG 745482 29 100.0 32 ............................. TCGCTTCCGAAGCACGTGACGATTATCCATGG 745421 29 100.0 32 ............................. GCACCGGGCAGGCCGGGGCGGAATCCAGCACC 745360 29 100.0 32 ............................. TCGCCGTTTCCTGCCGTTCTATCCGTTCTGAC 745299 29 96.6 32 ....................A........ TTGCATCCTTCGCCCTTCAGTCGGCCATCACC 745238 29 100.0 32 ............................. TATGTCGGGTGCTTCGGAACAGGTCGTAACGG 745177 29 100.0 32 ............................. CTCAACGCGTCGCTCGTCAATGCGCAGGCGGC 745116 29 100.0 32 ............................. GTCATCCGCCCGAGCATCTTGTCGACGTCGGA 745055 29 100.0 32 ............................. CCGCTCGAACCGCTCGGCCGCGCGATCGGCGC 744994 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 79 29 99.5 32 GGCTCCCCCGCATGCGCGGGGATAGACCC # Left flank : AACGTCTGGTGCGCAAACGCTCGGCATTGCTGTTCCGTCAGCGTGCCGTCATCCCCGGCATGATCGACCGGATCAAGACGCTGCTGCTCCCGGGCGAAACGCCGCCGCCGGCGCCCCCGGCGGGCATGGCCTGACGTCGATGCCGCTTACCGTCGTCATCACCCGCGACGTCGAGGATCGCTACCGCGGGTTTCTCGGCTCGGCGATGCTCGAACTGGCCCCCGGCGTCTATGCCCAGCCCCGGATGAGTGCTGGCGTGCGCGGCCGGATCTGGGCCGTGGTCGAGGAATGGCATGGCCGCCTGCGCCGCGGCAGCATCGTGATGTGCTGGGCCGAATCCGCCGCCGCCGGCGGTCTGGGGCTTGCAACGCTGGGCGAACCGCCCAAGGATGTGACGGCGCACGACGGCATCCTCCTGGTCCGCCGCGCGCTCCCCGCCCGAACGGAGGATTGAATGGATCTTTGACATTGTTAGAGAGAACAGCCAGTTGGGTGGCAGA # Right flank : ACCACTCCGGCCGTATTCGCTGCCGAGCTCTAGCAGCAACTGGCGGGGTTAATCTCACCCGTTGCTTCACCTGCACTCCTGGGCGACAACATCGGTCGGCCTCTGGTTGCCACTGAATGAAAGAAAGGGGTTACGTCAGCTTTAACTCGGCGATTATATCGGCCTGCAACGCATTATCAGACATCTCTACCAGACGCTCCTGGCTGTGGTCGATCCAGCGCATCATCGTCGATAGCTCGATACCCAGATTCTCCGCTAGCTCCTGCTGCGTCCGTCTGCTGGTTGCCACCAGCCGTGCCGCTTCGTGCTTATTCCTTCATGAACCGTCGCTGCTTCGTCATCGAGTTCGCCTTTTGCTTCAAGGTAACTCTCCATTTTCCGGGGGCACGTTCGTTCCGTTGCGTGCAACGGCAAGAACGCCATCAGGACGGCAAGATCGACCAGTCATCCGTTCCATGATCGTACCACAGCATCAGCACCTTGTTACTTTCGGCGTAGAC # Questionable array : NO Score: 3.23 # Score Detail : 1:0, 2:0, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGCTCCCCCGCATGCGCGGGGATAGACCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,4] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [38.3-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.42 Confidence: HIGH] # Array family : NA //