Array 1 239961-241695 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADNNW010000003.1 Bacteroides caccae strain BSD2780120875b_170604_B11 NODE_3_length_425639_cov_34.1434, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 239961 47 74.5 30 TAAA..CC.ATA..A......G....T.................... AGAAAGGAAGAATTTTACAGGAAATGCACT 240038 47 97.9 30 ..............C................................ ATAACAAGAACGGGGAAAGTGATAAGGCCG 240115 47 100.0 29 ............................................... TGGCAGATGGTAATGACGGCACGGACGGT 240191 47 100.0 30 ............................................... AATTCCAAATATTTCGAACTATGGAAGAAG 240268 47 100.0 30 ............................................... TACGATAACCAGAAGATTGAGCATCATACA 240345 47 100.0 29 ............................................... AAACAACAGATAATCCAGATGCATCCGTT 240421 47 100.0 30 ............................................... TGAAGAAGCAGAAGAAGAAGCAGCACCAGC 240498 47 100.0 30 ............................................... GCAGCACCAGCAGCAGTTGCAGCAGAAGTA 240575 47 100.0 30 ............................................... AGACATAGACGCAGTACAAGACTGAATACA 240652 47 100.0 29 ............................................... AAATAATGAATTTCTTTAACAGAACGCGT 240728 47 100.0 30 ............................................... GAGTGAATTCGCAAGGCTTGCCATTACGGA 240805 47 100.0 29 ............................................... GTGCATCAAGCAAATACAACAAATATGAT 240881 47 100.0 30 ............................................... ATTTGTTTCCTTGGTCTGATTAGCGATCTG 240958 47 100.0 30 ............................................... ACATTACAAAATATATGTACAAAAAGGATG 241035 47 100.0 30 ............................................... TAAAGGCGTACACTTGTCAGATGAATTTGA 241112 47 100.0 30 ............................................... TTGAGAAATTCATCGTCATTCGTGGAGCCG 241189 47 100.0 29 ............................................... ACATTAATGAAAAAACAACATGAGTATAA 241265 47 100.0 30 ............................................... CAACTGAAAATCACGGGCCTTTTGTGCTTC 241342 47 100.0 30 ............................................... TAATCTAAAAAATTAAAATTATGGGGAAAA 241419 47 100.0 30 ............................................... GGAACCGTGGACGAGCGTGTAGTACAAGTG 241496 47 100.0 30 ............................................... TAAAGGAGGAACAGAAAAAATTACTTGAAA 241573 47 100.0 29 ............................................... ACAAACATTCAGAGGTTCAATAGAAAAAA 241649 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== ============================== ================== 23 47 98.8 30 GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGAATACAGC # Left flank : TTCGCACCTCTTTACTCTTTGAAAGAGCAAATCATGCAGAGTGACAACAGTCTGATTCAACAGACAGTGGGTACCGCTTTTGATATGTGGCAGAAATTCGCGTTCACTATCGTATTGATTTCCTCCTTCATCCTACTGTATCAGAAAGCTAAGTTTCAAAAAGCTGTTTCCAGCCTCCGCTTTTACGGCAAGATGAGTCTGACAAACTATATTTCCCAATCTGTTCTGGGTGCCATTATCTATTTCCCATTCGGATTTTATCTGGCTCCTTACTGCGGATATACTCTAAGCTTGATTATAGGTATTGTTCTTTGTATCTTACAGGTTCAGTTCTGTAAATGGTGGCTGTCCGGACATAAACAGGGACCATTGGAGACGATATGGCATAAATGGACTTGGATAGGGAGCAAATAATACAAAAAAATGTATGAATTGAATAATTTGAACTATAGAACAACATATTATGGTATTTATACGGGACAATTAGGTTTTGTTCTGTA # Right flank : CACAATCGCCATTAGCCGCTGTATTTCAATAAGTTAGATCACAATATAGAAAAAGAAAATGAGCTGTAAATTCATTAAAAAATCCCGTAGTCTTACGGGATTTTTTATTCAAAATAACTCTAATTGTTGTCCTGGTGTATTAACAGATAATATTTTCTTCCCATAAAAGAGTTCAATATTCTCAAATTGCTTATCAGTTATGCACATTATTCCAACCTGACCATATTCTGGCAAAAATGATTTTATTCTTTTTATATGAACCTCAGCATTCTCACTACTTGCACAATGACGAACATAAATAGAAAATTGAAACATAGTAAAACCATCTTTCTGTAAATTCTTTCTAAAATCGATATAAGCCTTTTTATCTTTTTTAGTTTCTGTTGGCAAGTCAAAAAGCACTAATATCCACATAATACGATATTCACTAAAACGATCCATTACTTCTCAGGATAAATAATACGACGAAGCTCTCCAGTAAAACATTTATAAAGTGAAGC # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGAATACAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.09%AT] # Reference repeat match prediction: F [matched GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGAAACAGC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.20,-3.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [13-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0.78 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //