Array 1 1519935-1519384 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_JNIL01000001.1 Alicyclobacillus macrosporangiidus CPP55 N687DRAFT_scf7180000000004_quiver_dupTrim_3167.1_C, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                      	Spacer_Sequence                           	Insertion/Deletion
==========	======	======	======	=====================================	==========================================	==================
   1519934	    37	 100.0	    35	.....................................	CGTCCAACGCAAGAGAAGATCCTGCGCCTGCTCAC       	
   1519862	    37	 100.0	    34	.....................................	GTCACTGGTTACATCAAGACAAACGGTACTCTTG        	
   1519791	    37	 100.0	    35	.....................................	ATCATTTGGGCCACCGCTAACTGGTGCTGCAGGTC       	
   1519719	    37	 100.0	    35	.....................................	GGGAGTGTTCGCGCCCATTCACAATACTGCTTCTC       	
   1519647	    37	 100.0	    42	.....................................	TCCCCCAAGGCCACCGCCACGATCGCAGACACCGTCACACCC	
   1519568	    37	 100.0	    37	.....................................	CGATTGCGTCCTGGGGCGCTAACTCGCCGCCCTCGTC     	
   1519494	    37	  91.9	    37	............G...........A..........C.	GTCTTGGGTTCCCTAAGCAAAGGCGAATCGGAATAGG     	
   1519420	    37	  83.8	     0	.........T.A..............CT......C.T	|                                         	
==========	======	======	======	=====================================	==========================================	==================
         8	    37	  97.0	    37	GTTGATCCGCGGCGCCAAGCCGCGGCTCCATTGAAGC	                                          	       

# Left flank :   CGAGGAGGATAAGTGCACAGATTTACGTTATTGCGCTTCGGGGGCCCGGACCGCCGACCGCTTAACGTCAACACTGCAATGATTCAGTGTGCCGGCGAGACGATAAGGTGGAATGGTTTGTTATCCCACGGGGACGGTGCCACCTTAAGGTGGAAAGGGATCTTAAGCCTTGGAAGGGCGATTGGGAGTGAGGTCCCCATGGGGTGTGCGGGCTTCGATCGGGTGACGTTATGGCGGATGGAGGCGTACCGTGGATGGCCGTGGGGGCGATCGTCGGGTACTGTGCGCTCTGGAAAACCAGTCCGGCTGTGCGCGAACCCGGAGCGAAGCCGCAACGCCGGGGAGTTCGCGCAATGTGTGAAACCCCCGTGACACCTGGACGTGTTCGATATTTGCGGGTAGAATTTGGATGGCTTGAAGGTGCTGTTCGTATCGATCTCGGAGAGGTTCGCGCAAGTGCGCCGAAATTCCGCCTGGGGACTGGCCTGAAAAGGGAAGGG
# Right flank :  CTGATGTCGCTCGCATTGGCTCCCATGCGTCTCTCCTTAACCCGCGGCCTCCAGCCGCGGCCCTGTAACTTCGCTTCCTCCCTCCTCCCTGACCCTACGGCGACCGATCCCCATGGCCCTTCCGCCCCGCTACGTCCTCCCCTCCTCCCTATCTTTCCCTCCTACTGTTCCTTCTCCTTCTCTCTCGTCCGCCCTCCCCTGCCTTCTCACCCCGCCACAGCCTGCCCCAGCGCGGCGATCGCCATCACCATGGCCAGGTACACGGCGCAGAATCGCAGGTTCCAGCGCATGATGACGGACGGGCGTTCGCCGCTGGCTGCGGCGGCGACGTTGAGCGTGGCCGTGAAGGGACTGACGACAAACGTGATCGCGCCGCCGCCGAGGAGGGCGACCGACAGCCAGATGGGGGACATGTGCAGCACCTGGGGGTGCAGGGCTGAACTGAGCAGCGTGATGGTGACAATCGGATGGAACCCGACCATGGAGAGGGCGACGGGGAT

# Questionable array : NO	 Score: 3.11
# 	Score Detail : 1:0, 2:0, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTGATCCGCGGCGCCAAGCCGCGGCTCCATTGAAGC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [6,6] Score: 0.37/0.37
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  NA [-15.20,-15.30] Score: 0/0.37
# 	Array degeneracy analysis prediction:      R [9-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [33.3-36.7]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0,0.41   Confidence: MEDIUM] 

# Array family : NA
//