Array 1 260264-264650 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAATJF010000001.1 Lewinella marina strain DSM 104084 Ga0373272_01, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ====================================== ================== 260264 29 100.0 37 ............................. TCTTTACGATAGAAGTAGTCCGGAGAACCGAGGGTGA 260330 29 100.0 36 ............................. TTCACGATGCGAGGAGGGGAGCAGCGGGCAGCCATG 260395 29 100.0 35 ............................. GTGTCTATATGTCCCACAAACTGTTGGTCAACCTC 260459 29 100.0 35 ............................. TATGTCCACCATGGCCGGTACCGTGCAGGTGACCC 260523 29 100.0 36 ............................. CTTGCCATCGGTGGCCTTACCCGTCTTGTGGGCTGG 260588 29 100.0 36 ............................. GCCTTTGTATTCGGAGGTATGCGCGCCCCCACTAAG 260653 29 100.0 36 ............................. GTGTTGATGCTCCTCAACGTGGTTGGACTTCGGGCA 260718 29 100.0 36 ............................. GTCTTTGCGGGCCATTATCGCCGTGTAAATAGAACC 260783 29 100.0 37 ............................. TCGATGATGGGGTCGTCATCCGGGGTGGTTTGGGTGA 260849 29 100.0 37 ............................. TCGTGTACGTCCTTTCCCTGCGCCCCGGTATCAGTGG 260915 29 100.0 35 ............................. TGGATTGATGCCTTTCACGATCTGAACGGCGTAGC 260979 29 100.0 36 ............................. TTGCTACTACCCATGTTGGTGGCATTTCCGAAACTA 261044 29 100.0 35 ............................. AACGCGAAGCGCTGCGGCGATACTATCGCCTAACC 261108 29 100.0 35 ............................. CAACATAGGTCTGCTTGGTCGTTTGTCCTAAAGCC 261172 29 100.0 37 ............................. TTGTAGTGCCTTATACCTTCCTGTTTTTTGGTACGGC 261238 29 96.6 36 ......................A...... TCTTTCATGAACATTTCTGCGCCGTCAGCGTGAAGG 261303 29 100.0 37 ............................. TGCCAAAGACCGAATAGGGGATGCTCTCGATCAGGCC 261369 29 100.0 36 ............................. TTGCTCATGGCAAACTGGCAGGAATCAACCGAAGCG 261434 29 100.0 37 ............................. TTGGGGTTGAAGACGATATTGGCGTCAGGCATGTACA 261500 29 96.6 36 ................T............ ATGAATGGTGGTCGCATCTTCGCGGAGGGCGATTTT 261565 29 96.6 36 ................T............ TAAACTACGCCACCGCTTCCCCGCAAATGGCTACTA 261630 29 96.6 36 ................T............ ACGTAGCCAAGCCCACTTACGCCTTTGAGCGGGATG 261695 29 96.6 36 ................T............ CAGGGAGAACCCCCACGGACGGCACATGACAACAGA 261760 29 96.6 37 ................T............ TGGGTGGTATTCGTACCTACCTGGCTGGTGTCCGTGC 261826 29 93.1 36 ................TT........... TGGCTGGAACGCTACGGGGGCCTTGCCCGTCCGGTA 261891 29 96.6 36 ................T............ GTAAATACCTTACTGGCGTTGTAGACCTTCGCCCGG 261956 29 96.6 36 ................T............ GATGTCTACTATGGCCGGTACGGTTCAGGTGACGCT 262021 29 96.6 36 ................T............ TCGCTGTGCAGCTCGGCAATCAGCTTCAGTCGCTCT 262086 29 100.0 36 ............................. GCCGTGTCGAGGATGAACACCACGGCCCCCTCGCCG 262151 29 100.0 37 ............................. ACGTTTTTTGCTGAGGCGTTCGGACCCGGAGAGCAGG 262217 29 100.0 36 ............................. TCGGAGCGGGCCCGCAAGTGGACGCCCAAGACCGTA 262282 29 100.0 36 ............................. GCCTCGGCATCCGCGCCGGAAAAGCCTTCTACTACG 262347 29 100.0 36 ............................. TCAATTAAGGTATAAGGTCTACCGGTTCACGGCCAT 262412 29 100.0 36 ............................. AAGTAGCCCGCAAGATCGTAGCGCAGGAAGGCCTGC 262477 29 100.0 37 ............................. AAAGCCTACCAGGGCAGCGCAGTGGTTGTTCTTCCAC 262543 29 100.0 36 ............................. GGACAATCGCGTTCAAAGCCCCCCGCAGCCCCAAAC 262608 29 100.0 34 ............................. GCCTTACGAATAATTGGACCACCAACTACGTGGT 262671 29 100.0 37 ............................. TATACAGGGCTATCGTATCGACTGCCTGCGCTGACAG 262737 29 100.0 35 ............................. CTGATACTCATAGCTGGGGCAGTGAATATCTACGG 262801 29 100.0 37 ............................. GCTTTCTTCCCATCGTTCCAGTTGGCCGGGAACTGGT 262867 29 100.0 36 ............................. TGACCCCATTGGCGTGGTGACGGGCGTGGAAGTCTA 262932 29 100.0 36 ............................. ATGGTGCCGCCATCTTCCGGGGTGCCGGGGTGCCGG 262997 29 100.0 36 ............................. GAGGAAGCCAAAAAGGACATTGAGGACGTAAACAAG 263062 29 100.0 35 ............................. TTTAATGGTGAAGTGATACAGCAGCACGGCGGCAG 263126 29 100.0 36 ............................. CGCATGACCTGGAATGCAAAACTTTAGAAGTCTCTA 263191 29 100.0 37 ............................. GACGAAATGATCGGTGACACCCTCGTAAAGCGATTCC 263257 29 100.0 36 ............................. ATGGCAAGGGTACTACCCTCGGTGGCCACGTACAGG 263322 29 100.0 35 ............................. GCAGCATACCCCGTCGCCGGGGTTTGCAGGTAGGC 263386 29 100.0 34 ............................. GCTGCTCGTGCTTAAGTCGTTCAATATCACGCTT 263449 29 100.0 36 ............................. GAGTTTGATCATCGTGGTAATAAGGGACTATTTTGA 263514 29 100.0 36 ............................. TTTGCGCTGAATGCCTTCATTGCATCGGGTAGCTTG 263579 29 100.0 36 ............................. ATATTACGTGGTATGCTTTCCTTGCTATGGGATTGC 263644 29 100.0 35 ............................. TCCTCAACCACCCCATGTTTGAAGATATGGGATTG 263708 29 100.0 36 ............................. TCTGACTTCTGGCAAGGTTAGCATCGCCACCGACAT 263773 29 100.0 37 ............................. TAGATGGGCCGCAGGTAGGCAAGGCCCGCCACGATTA 263839 29 100.0 36 ............................. CCGTCGAAGTCGATGACGGGGGTTTCCAGGGTGCTG 263904 29 100.0 36 ............................. CTCAAATGGCCCGCCCGCCGGATGGACTACCGCAAC 263969 29 100.0 36 ............................. TGGAAGGCGTTGAGGGTGTTGGTGGCGCGGCCTCCG 264034 29 96.6 35 .T........................... TTTGTACTGCCCTAACTGGCTGCGCAGCACCGCAG 264098 29 89.7 37 G..CT........................ TGGATAGCTGGGCCGTTCGCGCTCTGTTTGCGTGGCG 264164 29 100.0 37 ............................. TACGATAACCTTTAGCCAGGCGCGGCAGGTATTCCGG 264230 29 100.0 38 ............................. TCCTCGCTTCGTAACATACCCGTCCACTGATTGCCCGG 264297 29 100.0 36 ............................. GTTTTGGTTTATAATAAGGGTATGCCTACCGATTGG 264362 29 100.0 36 ............................. GAATTATCGAACGGCTCAAAGTAACCGCCAGCAAAG 264427 29 100.0 36 ............................. ATCGAGACGGGAAAGGAAATCGGGATCCATATTGCG 264492 29 100.0 36 ............................. TAGGCTAGGTACTTAATCTGCATCTTCACTGGTGTC 264557 29 100.0 36 ............................. GAAAGTTGGAAATCGCTGCCTACATCAACGACGACA 264622 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ====================================== ================== 68 29 99.2 36 CCCTGAATTGCACCTAGCGGAATTGAAAG # Left flank : GCATGGTGGTAACACCTTAAGAGGCTACCAACAAACATTATATGTACGTAATTGCTGTATACGATGTAGCCACTGAGCGGACAAACAAGATGCTCAAGCTCTGCCGCCGGTACCTGCACTGGGTTCAAAATTCGGTTTTTGAAGGGGAGATTAGAGCAGTAGAGCTCTCGGAGCTGGAAGCCGAAGCACTGGATATTATGGACCCGACGTACGATAGCTTCATAATCTTTACTAACACACATGTTCACCGTGTGAATCGTCGCATTTTTGGCCGTCAGCGAGCCAGTACGGATCAGTTTCTTTAGTCGTCGAAGCAGCGCCGATAGAAAACCAATGCTAGATGCATTTGGTGGGCCATAGAGTATGTGACTGGTAATCAGTAGGATGTGAGGTCGTCGGTGAGCAAGAGAAATTGCGTTACTAGTTGGCGACGCGCTTGGCGGCTGTTTTTTGACTTGAAACGCCAACTAATGCTATGTTTGCTTGTCGTTTTTATCGGG # Right flank : GTCCGTGTCCGGCGTTAACCGAGCGGTAGGATTGTTAACCACCAGCCCCCGGGGGTAGTCCGTCGGGCCTGTAGCCCGGCGTGTAAATCAGTGCTGTGGTGAAATGGGTAGGCGAGGACCTTGCAGTGTGACCTCCCCGCAGGGGCCCAGCACCTGCAAGGGTGCGGTATTTCTGGCAGCATAACGGCTGAAGCCGTCGCTACGCGAATCCCGGGCCGTCGGGCCTGTGGCCCGGGGAAAAACTGGGTGACGGGAAGGACCTTGCAGCGTGCCTGCCCCGCAGGGGCCAGCACCTGCAAGTGTCCGGTATTACTGGCTGCATGACGGCTAAAGCCATGGCTACGCGTACCCCGGGCCGTCGGGCCTGTGGGCCGGCGTGAGATGATACGGACGCTTGCGAGTGCGCCGCTGCGCTGGGCACACCGCGAGGTCCTGGCGGGCCGTCGGGCCTGTAGCTCAGCGAAAAACTGGGTGGGGGGAAGGACCTTGCAGCGTGCCCG # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:0, 3:3, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCCTGAATTGCACCTAGCGGAATTGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.72%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-1.10,-1.30] Score: 0/0.37 # Array degeneracy analysis prediction: F [1-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [58.3-36.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.18,0 Confidence: HIGH] # Array family : NA //