Array 1 2221-21 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAIIH010000009.1 Bifidobacterium sp. DSM 109958 Contig_9, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ====================================== ================== 2220 36 100.0 34 .................................... TTGCGAACGGCGTCAGCCTAGTTTAGGCTGAAAA 2150 36 100.0 37 .................................... CTGAGCGACCCCGTGTGCGTCGAATGCAAGAGCACCG 2077 36 100.0 34 .................................... CCCCATATATAAGGAGCTTACGGTGAAACGGAAT 2007 36 100.0 34 .................................... TGGTTGCGGACGGATGCGGAGCTGTGGGTGCGGG 1937 36 100.0 36 .................................... GACGGGAACGTCTGTCCTATCGAGGTCGTGTCGGCG 1865 36 100.0 35 .................................... ATGAACCAGGTCACGTCGTTCTCGGCCAGCCTGAT 1794 36 100.0 36 .................................... TGGGTCGGCGGGGACACCGGTCTGAAGCAGACCACG 1722 36 100.0 38 .................................... CCGTCCCTGGCTGCGGCCGCGCAGGCCATCATGGCCGA 1648 36 100.0 35 .................................... TCGACGGCGGTCCACCATTCGGTCTCGCCGTCCTC 1577 36 100.0 36 .................................... CAGTTCTGGTGGCTGCGTTCCGAACTTGAGGCCGCC 1505 36 100.0 35 .................................... GTCGTGTTCGGTCAGGGCCGTCTCGATGCCCGCTC 1434 36 100.0 36 .................................... TTGACCTGCAAGGTGAGTCGTTCCTTGAGTCGGATC 1362 36 100.0 37 .................................... TGGCGTCCGCCTGTTCGTCCGTGATGTTGATGCGCTG 1289 36 100.0 36 .................................... TGCGTGACCCACCCCAAGTGGGTGCACGCAACAATC 1217 36 100.0 36 .................................... ACGCCGACCTACACGCCCACGCCGTCGTACACGCCG 1145 36 100.0 36 .................................... GTGAAGCGCATTCGCGCCTCGACGGTCGGGTCGCCC 1073 36 100.0 38 .................................... AGCGCTGTCTGGAGCGGCAGGGCGTGCGCGTGGTGCGC 999 36 100.0 37 .................................... ACGCGCGACGGGATCAGCCAGTCGGGCACGTGGTCGC 926 36 100.0 36 .................................... TTGAACCCGATATCGTGACGCGCTACGCGCCGGAAG 854 36 100.0 37 .................................... GTTCGAATCCTACCGGATATGCGATGGCTTGCGTGCC 781 36 100.0 38 .................................... CTGCCGAGGGCATGACCGAATTCCCCGATTGCAGCGAC 707 36 100.0 36 .................................... TAACATGACGCCATCTCTCACGGTGCCAACCGTCAA 635 36 100.0 36 .................................... CTTGTCGGTGATCTGTTGTGAGAATGACTTGGTGAC 563 36 100.0 38 .................................... TCTGTGACACAGTATGACGGAGGAAGATGATATCCGGG 489 36 100.0 36 .................................... CGAACGTGAGAAGCGCATCGCCGAACAGGCATGGGA 417 36 100.0 36 .................................... GTTTGAAGCAAAGAGTCCAGCCGGTTGCCGCCGACT 345 36 100.0 35 .................................... GACGTGTGGCGCTCCGACAACCCCGGCCTCGGCAC 274 36 100.0 38 .................................... TCTCGCGGGGTGTTGGCTTCGTTTTCCTTGTTCGGGTC 200 36 100.0 37 .................................... CCGGTCAAGGATTACGGCAAGCAGAAGGTCGAACAGG 127 36 100.0 35 .................................... GACGTGTGGCGCTCCGACAACCCCGGCCTCGGCAC 56 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ====================================== ================== 31 36 100.0 36 GTCTCCCTGCCTTCAAGGCAGGGATTTCATTGAGGG # Left flank : ATGGGGAACGGCTGCAATACAGCGTGTTCCTACTGCTCATCCGGCCGGCGAAGATGCTCAGGGTCAGGGCTTCGCTGCAGCGCGAGATGAACGCGGCGGAAGACTCCGTGGTGGTGTGCGATCTTGGCACGAGCGATCACGCCTTGTGCGCGCTGCAGTTCATCGGCTCGCGCAGCTATGAGGACGTGGCCGTGCCCACCGTGATCTAGATTCGCTTGCGAATCGAGACCGATTGGCATCCGTTGCCGATGCGAAGACAAGTTGTCGTTGCTGCGCGGCTGCACCGAGCATGCAATTGATGGTTGATAACTGCACAGTGTGATTGACGTCCCATGCGAGCGCTGGATCATTCGTTCACATCCGCTGCAGCGCTCGCGGCTGCATTTGTGCCGATTCTGCGGTGCCGAGGCTCTCATGATGAGCCGAGCGTCGCAGGTTGCCGCGGACCTCTCGCAGCAGTACGTTCCGTACGGCTCAGGTGCTAGCCTAACCAATAGGCT # Right flank : GTCTCGCGGGGTGTTGGCTTC # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCCCTGCCTTCAAGGCAGGGATTTCATTGAGGG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [10,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-11.10,-11.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [11.7-40.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.64 Confidence: LOW] # Array family : NA //