Array 1 121229-121396 **** Predicted by CRISPRDetect 2.4 *** >NZ_WXRT01000001.1 Enterococcus hirae strain BIOML-A17 scaffold1_size411402, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 121229 36 100.0 30 .................................... TCAAATGGAAATTGCCGTTGCTCTCATTTA 121295 36 100.0 30 .................................... GAGTGGCTTAATGTTTGGTACTTCTGGTAG 121361 36 86.1 0 ..........................T...TG..CT | ========== ====== ====== ====== ==================================== ============================== ================== 3 36 95.4 30 GTTTTAGAGCTATGTTGTTTTGAATGCTTCCAAAAC # Left flank : ATCAAATCGAAGGACGGATTTTTGAAGGTCAAAAAATGGTTGTGATCGAAGACTTGATCTCGACAGGCCAAAGCGTTTTAGAAGCAACGGAAGCAGCCAAAAGAGAAGGCGCTAATGTATTAGGTGTAGCAGCGATCTTTACGTATGAACTACCAGCAGGTGAAGAAAATTTTGCCAAAGCAGAGTTACCACTATTTACTCTCACGAATTATTCTGTCTTGATCGAAACAGCGTTAGCCGAAAAATATATTGATGAAGCGGAATTAGCCTTGTTAAAAGAATGGAAAAAGAATCCAGCGGACTGGTTAAAACAGTAACGAAGGATACGAAGATGGAACAAAAACAAAAGACTCAAAAAAGGGCTTTCGTTGAACAAAATCCATGGTATACTAGGATCAAACAAAACAACTGAATGAAACAAAGGAAGCATCCAAGACGAAAGTTTTGCTATGGACGAGTAGCGCGATTACGAAATTTCGTAAGAAAAAAATTTCTGCGAG # Right flank : TAATAGTTGCTGTACTTCGCTTGTCGTTTTTAAGGCGAAGAGCTTGCACAGAGTTGGTTTTGAATTTTATGATTATTTTGATGGAAACTAGAGTTGTTTTTCTGGTTTCTATTTTTTTATAGCAAGAATGGCATGATTCTCATCAAAAAAATTAATTTTTCGTTGATTTACAAACGGGATGTTTGCGAAAGATAGTTATTTAATGATAAAATCATCGGAAAAGTAAAGGGGAGGCTATTTTATGGGATTGAATGAATTTATTTTAGGTTTGAATAATTTGGAAAAAATTACACGAGCGCCAGGGTTCTTTAAATTTACTGAACATACGGTAGCCGCTCATTCTTATCGAGTGGCTTCGATTGCTCAAGTCTTAGGTGACATTGAAGAGGTTCATGGTCAAGCGATCGATTGGAAATTACTTTATGAAAAAGCGTTAAATCATGATTATACAGAACGTTTTATCGGGGATATCAAAACACCGGTCAAGTATGCAAATAAAG # Questionable array : NO Score: 5.13 # Score Detail : 1:0, 2:3, 3:0, 4:0.77, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTATGTTGTTTTGAATGCTTCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: F [matched GTTTTAGAGCTATGTTGTTTTGAATGCTTCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-2.20,-0.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [61.7-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : II-A [Matched known repeat from this family], // Array 1 25401-25101 **** Predicted by CRISPRDetect 2.4 *** >NZ_WXRT01000012.1 Enterococcus hirae strain BIOML-A17 scaffold12_size94266, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 25400 36 100.0 30 .................................... TTTTCATAGTTATTTAGCATTGCATTATCT 25334 36 100.0 30 .................................... TAATGCCGATTTGATTTTACTTCCTTTATA 25268 36 97.2 30 ................A................... AGTAACAGTGGTTGATGAAGTATCTTATAC 25202 36 97.2 30 ................................G... CGGAATCTCGCGTTTTGAACTGCTAGTTTT 25136 36 91.7 0 .........................AT........T | ========== ====== ====== ====== ==================================== ============================== ================== 5 36 97.2 30 GTTTTAGAGCTATGTTGTTTTGAATGCTTCCAAAAC # Left flank : CTAAAATCAAGGATTGATCAATTAACCACCAGGGTTCAGGAATGGATTAGTGAGGAACTCTTAGAACATGAATTAGATTTAGTCTGTGAAGAAATGAGTATGGTTGAGCTATTCAAAGCATTAAAAATAAGAATTACGACGCAACCAGAATCAATTTTTCAAAAAATAATGGAGATTTTACAGATTTATAAGTATCTAGTGAAAAAGAAATGCTTGGTTTTTATTAATGTTGGAGCGTACTTAACAATCATAGAAATGGCTGAACTACAGGAATATATTTCTTTGTGTCATATGCCTGTCCTTTTTATCGAACCACGAAAAATAAAAGGATTGAAGCCAACTGTTTTAGATCAAGACTATTTTTTGTGTGAAGAAATGTGGTAAAATAAGAACAATCAAAATAACAAAAAAACAGCATGAATGAGCATTCAAGACGAAAGTTTTGCTATGGACGAGTAGCGCGATTACGAGATTTCGTGAGAAAAAATTTTTTCTGCGAG # Right flank : GTAGAAGCGTTGTGCTTTACTCGATCGCTGTTTTAGTTTTGTGTTATTTTGAGTGCTGACCTCATCAACTATGATAAGAGGTAGCTTTAGAGTTATGTTGTTTTGAATGAATGAAGATGCCTACTTTATCATGAAAAGTAGGCTCTTTTTTTACTTATATATAGGAAAGTGTCTTCGGTTGTTGAATCTGCTAAGTTTTGATCATTGAAAGGGGGAATCGTGCCTTTTAAAAATGAATGGATATGTTTACGGAACAGGACACAATTGTTCAGTCTTTTCAATATTGAAACGAATTCATTTTCTCAAAGAAAAGATGAGTTGCTAATTTCGTGCTTTTTCTCTATCATCAAACAGTAGGCATTTGTTCGTGAACTAAAATGAATGTGAGAGGGGACAGTGAGATGTTTGATACAAATTTGACAACTTATTTGGACTGGTTGATCGCAATTTTGAATATTGCTTCAATCATTATTTTGCTGGTAGGGATTTTTTTAGTCTTA # Questionable array : NO Score: 5.84 # Score Detail : 1:0, 2:3, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:0.92, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTATGTTGTTTTGAATGCTTCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: R [matched GTTTTAGAGCTATGTTGTTTTGAATGCTTCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-0.80,-2.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [60.0-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : II-A [Matched known repeat from this family], //