Array 1 4574205-4573216 **** Predicted by CRISPRDetect 2.4 *** >NZ_POUP01000001.1 Enterobacter bugandensis strain IF2SW-P3 1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 4574204 28 100.0 32 ............................ AGCATTGCCGGGACTCTCAGCGTCGAATCCAG 4574144 28 100.0 32 ............................ TAAGCCCTGGAAATCAATCTGTCCTCCTGTGT 4574084 28 100.0 32 ............................ TTTTTGCTCATTGGTTTTTCAGCCTCAGTCTG 4574024 28 100.0 32 ............................ GTGGGGCTCGAAGCTCTGGCTGCTCAGCCGTG 4573964 28 100.0 32 ............................ AGCCTGATGGCAGCGCCGCAGCATGAAGTGAT 4573904 28 100.0 32 ............................ ATATTGATACCATCCTCTGTGGTGGCGCTATT 4573844 28 100.0 32 ............................ AAGAGGCCAGCTTCGTGAATCTGGCTTACGTA 4573784 28 100.0 32 ............................ ATAACCCGAATGTGTGAGCGGAGCCCCTTTAC 4573724 28 100.0 32 ............................ ACGGAGTACAGGTCAGCAACGTCAGCTGACGG 4573664 28 96.4 32 ........T................... ATATTCTGCTAAATCAACCCCGGCTCAAACGT 4573604 28 100.0 32 ............................ ATGAAGTCATTTACACACATTCAGCAGAAGGT 4573544 28 100.0 32 ............................ TACGCGATTCATCGGGGTCAGGGAAATGACAA 4573484 28 100.0 32 ............................ GAAGGGCGTAATACTCCAGGCCAAAACGATAG 4573424 28 96.4 33 .G.......................... AGAGATTGAACAGCTGAGTGACAAGCGTCGATT 4573363 28 100.0 32 ............................ TACATCACAGGACAATCATCAAACTCACCAGA 4573303 28 89.3 31 ...........C...C......C..... ATAGAAAATAAGGCCTAACAGTCGTCGCACC C [4573278] 4573243 28 75.0 0 ........T..A....A....CCT...G | ========== ====== ====== ====== ============================ ================================= ================== 17 28 97.5 32 GTGCACTGCCGTACAGGCAGCTTAGAAA # Left flank : CGGGCTACGCGTTCGCTCTCATCCGGCGTCAGCGTCCGTCCCGCGCTTTTGCGGCGGGCCACGTTACGTTCATTAATCCCTGTAACGCGTAAAATGTCCGCTTTCGACATGGCCGTCCATTCATGAATATTGTCGAGCACGCTGACGGGCAATCCCTGGTTGAGAAATTCTATCAGCCGCATACCTCTGTTCGCGGGTAAACCGGCGTAGCGCCAAAGTGCGTTATCAGCAGGTTTCTTGGCGGGGATCCAGGTTCTCATGTTACCTCCTGATTAATGTCATTTGTCATGGTTAAGTATAGTCATTTGTCAGATGGAGTGGAATGGGGATTTTTTGTGCTGGGTGGTTTGTGAGAAGAACGATGTTTTGACCCTGATTTTTAACGGTTTTGTAATCCATTGATTTTAAATGAGTATTTTTGGTGGGTAAAAAAGAGGGTCAGAGAAGGTTTTTTAGCTTTTTTTGTATGCAAATCAGAAGGGTGTGGAGATATTATTTCA # Right flank : CTGGAACGAACGGCTAAATAATTGTTCAAATAATCAACAGCACCACTAAAAAATAAGGCCGGGATTAACCCGACCTTTTATATATTCATCTGCCATTACAGGCGAAAAAATTAGCGACTACGGAAGACAATGCGGCCTTTGCTCAGGTCGTACGGGGTCAGTTCAACAGTCACTTTGTCGCCCGTCAAAATGCGGATGTAGTTTTTGCGCATTTTTCCGGAGATGTGCGCAGTTACCACGTGACCGTTTTCCAGCTCTACGCGAAACATGGTATTAGGCAACGTATCAAGTACGGTACCCTGCATTTCAATATTGTCTTCTTTGGCCATCTAATCCTCTGGGGTATCACTACCAAGTTTTGAACCGGCAAGATAATGCCGAAATTCATCAATTAAGTAAAGAATTGCGCGATTAAAACGCAGCAAAACAGTTTCGGCGCATTGCCCAAGCGTCACGGTACAACCGAACAGGAAGCGCATTCGTAAAGGGGAGACGACAGG # Questionable array : NO Score: 6.14 # Score Detail : 1:0, 2:3, 3:0, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [12-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.65 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 4584688-4583758 **** Predicted by CRISPRDetect 2.4 *** >NZ_POUP01000001.1 Enterobacter bugandensis strain IF2SW-P3 1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 4584687 28 100.0 32 ............................ CTTAATTGTATAGGGGGAGCTATGAAAACGTT 4584627 28 100.0 32 ............................ TATAACTATCAATATACAAAATAAATGGTGCG 4584567 28 100.0 32 ............................ TAAAAAGATAAGAGCAATGTTCGTCGATGAGG 4584507 28 100.0 32 ............................ AGATACAACAATTATTTTAACAGATGATGGTA 4584447 28 100.0 32 ............................ AGGCTCAATGGTTCCCTGCATGCTATCACCAC 4584387 28 100.0 32 ............................ GTCAGACGCTCAATCGCAAGCTGCATTTTTGA 4584327 28 96.4 32 A........................... GAAGTATGGGTCACGTTTAACCCGTATTTCGC 4584267 28 100.0 32 ............................ TCTCGCACAAGGTCATTGAGTGGAGAGTGACC 4584207 28 100.0 32 ............................ CTCAAAATAAAAACCCTGGGCTAAATGCTCCC 4584147 28 100.0 33 ............................ CGCAGCGAAGCGAGGACTCAAAAAGCATTACGG 4584086 28 100.0 33 ............................ CAGCTCGCGCCTTCATGCGCTTACGCGCATTCC 4584025 28 100.0 32 ............................ AAAGCGACGCACCAAAACCGGCAGTAGTCACC 4583965 28 100.0 32 ............................ TGATCTGGTGTGTGCTGATAGTGTGTTTCACA 4583905 28 92.9 32 ............G.T............. GCCAGGAATGCGAGATTGCGGATATCAGTTGG 4583845 28 92.9 32 A...........G............... AGGACAGGCCCATATCACAGGATTTCTCTGTT 4583785 28 92.9 0 A......................T.... | ========== ====== ====== ====== ============================ ================================= ================== 16 28 98.4 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : TCCCCCAAACGCAGCCCGTATGCCGTTGCCTCGGGGCTTATCTGGAAGAAGTTAAAACCGGCCTCACGGAATCCATGCGTGATTTTCAAGTGGTGGAATTTGAGGACGAAGCGGAACAACCGCGACAAAAAGAGTGGCTGCTGGAAGATACCGAAACGAAATGTGACTACTGCCGGGCGTTGAATCATGTGCTGCTGGTGTCGCATTTTGACCGCGACATGCTGCCGCATCTTACAGGACTGCTCCATGACATTACGCATTCTATGGCCGCAGATGTTGTTGCGCCTCAACGTGAAGAAACGGTAATTCACATTATTTCCTAAGTGCAATCCAGGGCGTCGGGGGCGTTATTCTGACGCCATTGGTTTATACCCTTTTTTCTGATGCTTACGTAACATATTGATTTATATAGTGCGGATTTACGTTCCAGAAAAAAGGGTTTTAGGCGTAAAAGTTGATTATTTTATTTGCTAACAATAAGATGGCGTTGTTTCCTTTCA # Right flank : GCCCCTTTGGGCTTTAATGCCGTGGAAATGGCGTTACTATCTCACAGACAGTACAAGTAAACCCATCCCTCACAAATATTCACCTTGTCTATTTAAAAACGAAATACCATCATCCACACGCTATCCATTTTCAGATTAAATAAAAATCCCATTCAGGGGTTAATTATATTTCCGTGTATATATTATTTTTAAAAATAATACTTTAAAAAAATAATGTGTTTTTGTTTAGTTATCACAGAAATTTCCATTCATTTGATATATATCACATTTGTATTTCTCTCATCTCCGATAACATACCCGCATTCAATACCTTGAAATTAAAGCCGTTGCTATGCCTGCAAACAGCGTTACCCCAACAGATTTAAAAACCATCCTGCATTCAAAACGCGCCAACATTTATTACCTGGAGAAATGCCGCATCCAGGTAAATGGTGGGCGTGTTGAATATGTCACCCAGGAAGGAAAAGAGTCTTTTTACTGGAATATTCCCATCGCGAATA # Questionable array : NO Score: 6.18 # Score Detail : 1:0, 2:3, 3:0, 4:0.92, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [53.3-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //