Array 1 1236440-1237575 **** Predicted by CRISPRDetect 2.4 *** >NZ_PGEO01000001.1 Streptomyces sp. 2333.5 Ga0151173_11, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ======================================== ================== 1236440 29 100.0 32 ............................. GAGGCCAGAAAGCCTGTGGTCATGGAGCTGGA 1236501 29 100.0 32 ............................. TCCCGGCCGTCCAGGTCGGCGTGGTCAGCGAG 1236562 29 100.0 32 ............................. TCGTAGACGGGCGGGGCCGCGGAGCCGAACAA 1236623 29 86.2 33 G.....A......CC.............. TGAGGCGTTCCGGGCGTAGTCCGGTTGGGGTGG 1236685 29 93.1 32 TG........................... GAACCCGTCCCCTGGTGCCTGGACTATGCCCT 1236746 29 93.1 32 G..A......................... GGGGGCTTGATCAGGTTCTTCCAAACCCAGCC 1236807 29 93.1 32 G....................C....... TACGTCCACGGCCTCATCGATCTGACCGGCCA 1236868 29 93.1 32 G.....T...................... ATGTCTCCAACCTCCGTTGATGTGTTGTCATT 1236929 29 82.8 32 C..C.......A.CC.............. GGGACGTACCGGTCCTTGAGGGCCTGTGTGAG 1236990 29 82.8 32 C..C.......A.CC.............. AGACACCAGCCGTTTCCCCGGAGGCCGCAGCG 1237051 28 89.7 32 G....-...............C....... GATCTCGCCCTGCTGGACGGACTCCGGGACAT 1237111 29 86.2 40 GC...............A...C....... GGTGGATCCGCCGCTCGAGTCTCTGCTCGGAGCGACACGC 1237180 29 79.3 32 G..........A....T...A...A.A.. GTCTGGTTGGGCTTGGCCGGCGTGGATGCGGG 1237241 29 79.3 32 C..C.......A.CC..A........... CGGCTGGCCGCCCGGTCCGGACACGGCGACCG 1237302 29 82.8 32 C..C.......A.CC.............. ACCACCGCCGAGCGCAGCCGCCGCCTGCCACC 1237363 29 82.8 33 C..T.......A.CC.............. CAGGCAGCCCGCGGAGCAATCGCGGGCGGCGTC 1237425 29 86.2 32 G..........A.CC.............. ATCGCAGGCGCCCACACCGCCTTCGTCGGACT 1237486 29 82.8 32 C..C.......A.CC.............. TGGTCCATGATGTCGCCAAGGTACTTGGCGCT 1237547 29 82.8 0 C..T.......A.CC.............. | ========== ====== ====== ====== ============================= ======================================== ================== 19 29 88.2 33 ATGGTCCCCGCGCATGCGGGGTTGGTCCC # Left flank : ACATCATCGAGTGCTGAGGATGTGGGCCCTGACCAGCGTGTTCGCCTCTTTCAGCGCTGTCAGGGACTTCCCTGCTTACCCAGCGGAAAGTCCCCGAAAAGTCCCCGGGATGTCCCCGGCCGGCGAGGGCCTCAAGGGAAGCCATCCGCTTATTGCGGTAGGCGGAACAGCTCCCCGGCAGCACCTCCATCAGCCCGGCTGCAGAGGGCCCACCGTCAGCGGGCGGCCAAGCAGAATCGGGCATCGCGCCCCCCATGGCGCCAGCTCCATCCCGGCAAGAGCCGTCGTGAAGGATCGAGAGAGAGCCCAGTATTAGCCTGGGGACACCGACATCACATGTACCAGCGGTCCGGCGCCGGAGCGGTACCCCAGGCCACAATGGCTCCGCGGACCACTGCCGCCCCGCCGGACCCGCAACCCACTCGAAGGCCATTATGTCCGAATCGCTGAAACTAAGTAAAAACAACTCATCGTCTTCCTGAAACCGCAGCTCACGACCT # Right flank : CCGGGCGGCGATCGTGCCGAGGGTGTCGCCGTATTGCCCTGAGCGATCTTCTTGTCGTAGTACGACCTGGACGCGGGGTCGGCCAGGGCCGCGAACGCCGAGAGGAAGAAAGCCCGTTTGAGCTGCTTGTTTCCCCGCCGGGATGGTTGCTCGTCGTGGATCGACGAGCCCGAGCTGCGGGTCACCCGGGCGAGGCCGACATAGGCGGCGAGGTGGGCGGCGGACGGGAAACTGCTGCCGTCGCCGACGCCGATGAGGTTCCTGGCTCCGGTCCTGACGCCGATGCCGGGCATGGACGTCAGGACCTTGGAAAGAGGTTGGGCCTCCAGCAGTTTCTCGATCCTGACGGCGAGGAGTTTGCGCTGGTCAAGGACCGCCTGGAGCGAGTTGGTGAGGCTGGGGACGATCAATGCGGCCGCATCCGTGCCGGGCACGATCACGGTCTGCTCGTCCAGGGCGGTGAAGGTGTCTTCGACTAGCCGCTCGGCCATCCGCGGTGC # Questionable array : NO Score: 5.69 # Score Detail : 1:0, 2:3, 3:0, 4:0.74, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATGGTCCCCGCGCATGCGGGGTTGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGGTCCCCGCGCATGCGGGGTTGGTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-9.70,-9.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [56.7-40.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 1241293-1241630 **** Predicted by CRISPRDetect 2.4 *** >NZ_PGEO01000001.1 Streptomyces sp. 2333.5 Ga0151173_11, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 1241293 29 100.0 32 ............................. CAGGGGCAATGAATGATCCGGCCGATGGCATC 1241354 29 82.8 32 G..G.......G.AT.............. GCGTGGATCGCGGCAGTAACAGCGGGCCCGGC 1241415 29 96.6 32 .................A........... ATCTGCCGCGCGATGAGGTCGCGGTCGATGCC 1241476 29 96.6 31 .....................A....... GTAGTTGGTGTCGCCGCCGTCGCGCCGATCT 1241536 29 93.1 32 ....A...................C.... CGGCCGCAGAGGGGGCCCAGCCGTACCCGCAG G [1241553] 1241598 29 82.8 0 ...........C......A.CA.C..... | CA,G,G [1241606,1241613,1241628] ========== ====== ====== ====== ============================= ================================ ================== 6 29 92.0 32 CTGCTCCCCGCACCCGCGGGGTTGGTCCC # Left flank : GGCACCCACGACACCTGGGTTCGGCCCCAGGTTCAGCTCGGGAACCATTACATGGCCGACTTCATGATCGCCGGTGAGACTTCCCTAGGGCTTCGCTGGACGCTGGTCGAACTGGAGAGCCCGGTCAGCCGCCTGACCAACCCCGGCAACAAGCGGGCGACAAAAACCCTGCGCCACGCGGTCGACCAGATCGAGGACTGGCGCAAGTGGCTTTCCAACAACCTGCACTACGCCCGCTCCGCGCGCGGTGCCGACGGACTGGGCCTGCCGGGCATCACGGCCGAGGTTCCCGGCTTGATCATCATGGCTCGCGAGGACGCCGACGACGCGGCTGCCGACATCCGGGAACTCCATGCCCGGCGCTCACATATCCAGGTACGCACCTACGACTGGCTGATGCGTATTAACGAGTCACCCGACCCCCTACGTCGAGACGCCCCCGACCAGCGCCTTCGACTCGCTTGAAATCAGCCGCACATCCACCCCTTCTACGCCATGAG # Right flank : CGCCTCCACTGACGACATCATGGCCACAAACGCCACCGAGATCCCGCCCTGCACCCCCTGGCCGGACTCCACATCGCAGGAATCTTCCTCTGGTCAGCCCGATAATCCAAACGAAACTTGCCAGCTTCTCCCACACCTACACGTACTGTCCTCTCTCCCCGGGACGGGCTCCCCGGCCCTCCGTCCCACTGCCCGGAATCGGGCTCACGGAGCACGCTTCGACGCTCGTGTCGACCGAACGATCGGGACATGCAGGTGAATTGTCATGGAATTGCCAAGTTGCCGCAGAATCGTGGCGGCTACCGACAACGCCCGGGAGTTCTCGCATGTCCCATGTGACGGAGACAAATCCGCTCGCCCCTTACGTCCGCGGCGACCTGCCCGGCCGCTTCAACGAACTCGACGTGCTCAGGCGGCACTGGGCACGGTTCGCCGCCGTGTCCCAGGGCGCGGTGGTTCCCCCCTATGAGGTCTTGGTTCATCCCTCGAGCGGATGCAAT # Questionable array : NO Score: 3.76 # Score Detail : 1:0, 2:3, 3:0, 4:0.69, 5:-1.5, 6:0.25, 7:0.01, 8:0.8, 9:0.51, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCACCCGCGGGGTTGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTGCTCCCCGCACCCGCGGGGATGGTCCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.30,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [5-4] Score: 0/0.41 # AT richness analysis in flanks prediction: F [40.0-20.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.77,0.74 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //