Array 1 36088-32064 **** Predicted by CRISPRDetect 2.4 *** >NZ_CAJHAV010000021.1 Psychrobacter sp. LFX-11D isolate Psychrobacter priscuii LFX-15B1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== ===================================== ================== 36087 31 100.0 35 ............................... TTCATAGAGCATAATAGGTTAACCGAGGCTTTAGG 36021 31 100.0 33 ............................... TCCCAACACTGTTCATTCTCTCCCCAATCAAGG 35957 31 100.0 36 ............................... GGGTCGTACAAACGCGCTTATGTCTGTATTAGCCTG 35890 31 100.0 35 ............................... TATGGTGCTCGCTTAATGACAGCAGCCGATGCGCG 35824 31 100.0 35 ............................... ATCAGGCTTAATATTCATGATTCTAAATTGCATAG 35758 31 100.0 33 ............................... CTTATATAGGCTTATAATAAAGTTAATCTTACG 35694 31 100.0 34 ............................... CCGTAAATATCAGGCACTCGACCGCCTAAACGCG 35629 31 100.0 34 ............................... TCAGCAACTAGATATGCGTCACGCTGCATATCGG 35564 31 100.0 36 ............................... CTTATCTTTACCAAGCTGTGCAAATCGTGCTTGTAG 35497 31 100.0 34 ............................... TTAATCATACGCTCAGACAAAGCAACGATATCAG 35432 31 100.0 36 ............................... GCCAGCAGACACTATAACTTCGTCAACTGAGTTTTG 35365 31 100.0 33 ............................... ACGCCCGATGCAAAATCAAGATTGATAATATCG 35301 31 100.0 35 ............................... TCGTTCTTCTGTGCGTCTGCGTGTTAATCCTTTGG 35235 31 100.0 35 ............................... ATTTGGTAGTTTGAAGGCTTGTAGGCTATTGATTG 35169 31 100.0 35 ............................... TCGTTCTTCTGTGCGCCTACGTGTTAAACCTGGTG 35103 31 100.0 35 ............................... TACTACTTGCCCTACTGGTTCAGTATGGTTATGAG 35037 31 100.0 35 ............................... ATATTGGATAGCAATAGTGGCGCAGCTGATGCGGG 34971 31 100.0 33 ............................... TTTAAAAGAATGATTGCATCTTCAAAGCTATCG 34907 31 100.0 33 ............................... ATCTATCTTACGCCTTACTCTGCGAGCGGTAGG 34843 31 100.0 33 ............................... TCACGACTAGCGTAATACGCTAACGCTTTGGTG 34779 31 100.0 34 ............................... TTCAGGAGTCATAGTGGTGTCCTTTTGCGTATTG 34714 31 100.0 35 ............................... GTGCCAAGGTTGGTGACGCTTTTAATCTTGAATCG 34648 31 100.0 35 ............................... ACGGGTCTAACTGACAAGAACGGTGTTGAGATTTG 34582 31 100.0 35 ............................... TACGAGTGATTATTAATATACTGAACCGTCAGGAG 34516 31 100.0 34 ............................... AGAACTACTTTTGATACCCATATCCATAGTGATG 34451 31 100.0 34 ............................... TTACCTGCTCTGTATAGATATTTAAAGCAATTCG 34386 31 100.0 34 ............................... ATGAGCCGTGTCGATAAAATAGAAGCGTTAGACG 34321 31 100.0 34 ............................... GATGGACGAGGAGTTTGTAAAAATTAGCGAAACG 34256 31 100.0 36 ............................... ATCGATGAGGTGCTGAATGACCAAAGCAAAGACGAG 34189 31 100.0 34 ............................... ACCGATCAACTGAGGGACAGCGAGAGCAAGCGCG 34124 31 100.0 35 ............................... TATCAATCCGTCAATATCGCCCCATCCGTTAGGTG 34058 31 100.0 35 ............................... ATCAAGACCGTAAGCAAAAATTCGTTATTGAGTGG 33992 31 100.0 35 ............................... TAAAAATGCCGACTCATCAATAAAATACAATGATG 33926 31 100.0 35 ............................... ATGAGATTGAGCAGCAACCGCGCTGGCGTGCTATG 33860 31 100.0 35 ............................... CCACAGAAACGCGCTGAGAACAAGCCAAACGGCGG 33794 31 100.0 35 ............................... CCAAAAGAGATTGACCGCATAAGAGTGAGCGAGCG 33728 31 100.0 33 ............................... AGCATCGACCGCTTAAAAGACATACGTGACTGG 33664 31 100.0 35 ............................... TAGTTTTTGGGCGAGAAATGACCTGGAGATATACG 33598 31 100.0 36 ............................... GGATTGCGTTGGTAATGCGTTCGCATTGCCTTCGCG 33531 31 100.0 34 ............................... TTGCAGCTGCTTAATGAACGCATCAAACATTGCG 33466 31 100.0 37 ............................... CAAGACGCAAGATGATGGCGGTTGCAATGAGTGAGGG 33398 31 100.0 35 ............................... TGGCGTTGGGTCAGCTCTATCAGTCAGATTCAGGG 33332 31 100.0 32 ............................... TTTTAGTAAAGAAAATAAACCAAAACAAACAG 33269 31 100.0 33 ............................... TTCCTCACCTTCGCTTAAGGTGCGAATAGCAAG 33205 31 90.3 33 .....G..A.......C.............. GATATCATGCGGCGCAAAGTGTCCGCCATAATC T [33199] 33140 31 90.3 33 .....G..A.......C.............. AAAACGTATTACGAAAAGATGATAAGTGAGGAA T [33134] 33075 31 90.3 32 .....G..A.......C.............. CAGCGGTCGATAGTTTGCTACGCGTGATTACT T [33069] 33011 31 87.1 35 .....GT.C.......C.............. AGTGCGATAACCGTTTCTGCTGTCTCCAAGTCGTC A [33002] 32944 31 87.1 32 .....GT.C.......C.............. CCTATGGTGAGATGTTGACATTACCGCTTGAA A [32935] 32880 31 87.1 33 .....GT.C.......C.............. GGCATTAGCAATGACTTTTGCAGCAACAGTATC A [32871] 32815 31 90.3 33 .....G..A.......C.............. AGGAGATAAGAGAGTCAATCATATCTGATTTTG T [32809] 32750 31 90.3 33 .....G..A.......C.............. TATTCAGTTTGATGCTTCGTTAGTCGAAACTAT T [32744] 32685 31 90.3 32 .....G..A.......C.............. TAATTCTGTACCTAATTATAAATATATCCCTA T [32679] 32621 31 87.1 34 .....GT.C.......C.............. AAAACAGACGCCCGATTGGTATGTCGAGCCGTTA A [32612] 32555 31 90.3 33 .....G..A.......C.............. CACGCCCTGTGCGCCAAGAAATGAGCCTGAATA T [32549] 32490 31 90.3 33 .....G..A.......C.............. ATAATCATTACTCTATCATTAGTGTGTAGTAAA T [32484] 32425 31 87.1 35 .....GT.C.......C.............. TTATTGTAGTTATCCCAAGCCCATTCTTTAGCATC A [32416] 32358 31 87.1 33 .....GT.C.......C.............. TTTACTGCGTGTTGGATGCAGCCGCTATTATCT A [32349] 32293 31 87.1 36 .....GT.C.......C.............. GACACAGCAAGCGGTTATGGCTTTGGCTTGAATAAG A [32284] 32225 31 90.3 34 ........C.........T...........A GGGGATATAGGCAGTCGCTTAGCTGCAATTAATT A [32216] 32159 31 93.5 33 ........C.........T............ ACGATCAATAAGCGTGTAGTACGCCTGATCGTT A [32150] 32094 31 74.2 0 .CGCAC..A.........T...........T | ========== ====== ====== ====== =============================== ===================================== ================== 62 31 96.6 34 TTCGCACCTTCACGGGTGCGTGGATTGAAAC # Left flank : GTTCGCAACACTGTTCATTCTCTCCCCAATCAAG # Right flank : ACTTCTAGTTAACTAACTTTTCAAATTTGGGCGTAGATCCTATATCTATAAACATAAAACTAAATAGCACGTCATATGCTGTCGCTTAATTTAAGTTTTTGCCTCAAAACCTCACAAATTGGCTTTTAATTGTTTGCTAATACTCGTAAATTATTAGTGGAGGTCAATACACAGGATATAACGACCAAGTCATCAACTCGATATCTTAGTGGGAAAGATATGAAATCACTATCGATCGCTAAACTACAAACAATCAATGTGCTTGTATATTCAGAAATCATTAGTCTGTTTGATATTTATACCTGCCATATCAGACCACTTCTGAATAGCTAGGCTATCGAACTTGAGCAAAGTAATGCTTGCTCAAAACTTACCTGCTTTGTGAAAGAGGAGGAAAAGTGGTTCTTGCTCAATAACTTTGAGCTATTGCATATAGCAAAAAGCCCTTATATTGATTTTGATGTATTAAGAAAAGAAGTAGACGTGAAATATATACCAAA # Questionable array : NO Score: 9.09 # Score Detail : 1:0, 2:3, 3:3, 4:0.83, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TTCGCACCTTCACGGGTGCGTGGATTGAAAC # Alternate repeat : CCATCACGGGCGCGTGGATTGAAAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [6,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCACCCTCACGGGTGCGTGGATTGAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [0.00,-1.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [71.7-35.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.64,9.78 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 8259-30 **** Predicted by CRISPRDetect 2.4 *** >NZ_CAJHAV010000004.1 Psychrobacter sp. LFX-11D isolate Psychrobacter priscuii LFX-15B1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== ========================================= ================== 8258 31 100.0 34 ............................... TAAAATTGGCTTGGTCGATATAGGCTTGCTTTAG 8193 31 100.0 33 ............................... TAGTATCTTATTGGCTGTCTGCATTCGCTTACG 8129 31 100.0 34 ............................... TATTTGTGGCTGAATCTTGCGAGTAGGTATTACG 8064 31 100.0 35 ............................... GTTGGGACTATGCGGGTAACTCGCTAGGCGCAAAG 7998 31 100.0 35 ............................... TGCATAACGTGCGCCGCCAATGACAGCGCCAACCG 7932 31 100.0 37 ............................... TGCACCGCTGCTTTAGATACGGCTGCCATAATTACCG 7864 31 100.0 35 ............................... ATCAGTATGTTATCAAGGGCTGCTTGCTGCGTTTG 7798 31 100.0 34 ............................... AACTCATGCCAATTTAGGTGATATATGAAACTCG 7733 31 100.0 36 ............................... AAGGCATACAGCAGAACGACAATACGCTTAGACAGG 7666 31 100.0 36 ............................... AGCACAAAGTGTTTGACGGTATCGACCAAACAGGCG 7599 31 100.0 35 ............................... TTAGCCAACCAAATACCACACTACCTGATGTAATG 7533 31 100.0 33 ............................... ACGCCAAGATGATAAACAAAGGCTTGATGTTAG 7469 31 100.0 34 ............................... ACTAATAGCAGATAGTGCAGCAAAAAGCATAACG 7404 31 100.0 35 ............................... CGCAGAGCACTAATGGAAACGCTATTGAGATACGG 7338 31 100.0 34 ............................... CTAAATGAAGCTAAGAAGCATTTAAGCGTTCAGG 7273 31 100.0 34 ............................... TCGCTTTTCGCCTGATTGTTTATCTGTCCATTGG 7208 31 100.0 34 ............................... GCGCTGCTGCAAACCCTTGTTACTTACGATTGCG 7143 31 100.0 36 ............................... TCATCTAGCCCATCAAACACGCTTTGGTCTAGCTGG 7076 31 100.0 36 ............................... TAGCTTAGAGAGCGAATACGAATACCAAAACAGCGG 7009 31 100.0 36 ............................... CAGTCTCACCAACGGCAATATTGATACGCCCAGCCG 6942 31 100.0 37 ............................... GGTGGCGACCCAATGTCGTTCGAATTGTATCGTTACG 6874 31 100.0 33 ............................... CGATTGATGCACTAACAGACACCAATAAAACAG 6810 31 100.0 33 ............................... CAGCGCACAGTTAGCGAAACAGTAACGCGCATG 6746 31 100.0 33 ............................... ATCTACAACGGTATTAGTGCCCTTAGTAATTAG 6682 31 100.0 35 ............................... ACCAGTAGTACGGCTAACAATGTGCCATGCCAGCG 6616 31 100.0 35 ............................... TATATCACTAATATCACTTGCTAGGTATTCATTAG 6550 31 100.0 35 ............................... AGATTCCTAATCCGGGAACGGGGAACGGCGCAACG 6484 31 100.0 33 ............................... ATATAACCTGTAAAGTTCATGGCGTTACCCTAG 6420 31 100.0 34 ............................... AGTCACACCTAGATGGTTTTAATGCAAGCGAGAG 6355 31 100.0 35 ............................... TTCGCAGTTCTTGTAAGGCGCATCACCCGTTTCGG 6289 31 100.0 35 ............................... TATTGATGAGCCGTGGTATTCGTTAAGGCTGTCAG 6223 31 100.0 35 ............................... ATGCCTTACCCCTTGCTTGTTATATAGTCTAAGAG 6157 31 100.0 36 ............................... GGCAGTCGCTGGCGTGATAGGAGATGCTTTTGACCG 6090 31 100.0 35 ............................... CTGCTAAATACACCAGGGTTGTACCGCTAAAAGCG 6024 31 100.0 35 ............................... AACAAATGGTAGCTGTTTGATGCGAATATCCACAG 5958 31 100.0 34 ............................... AGATTAAAGGTTGTGAACTCCACACCAGTATCGG 5893 31 100.0 34 ............................... TTGATTACAGGATACCATTGCTTATAGGTCTTGG 5828 31 100.0 35 ............................... CTGTTATCTCTGTGCGACTATAACCATGATTTGCG 5762 31 100.0 33 ............................... CTGCTCATCACGCCAGCTCCAAAATAGCTTCGG 5698 31 100.0 34 ............................... ATCAACCGTGAATTGATTGGTGTCGTATCGCTCG 5633 31 100.0 37 ............................... AAGCTTAACGCGCTTAATCGACGCATTTACACGCCAG 5565 31 100.0 37 ............................... ACTCATGAGCCTACGGGCTTAGAGGTGACGTTTAAAG 5497 31 100.0 35 ............................... TTGCATACGCACCTCACAATTTAGGCTGTTTAATG 5431 31 100.0 34 ............................... TGGTCTACACACGGAAGGCGACGACGCTTTTTTG 5366 31 100.0 36 ............................... GATCACATATTCAACAGATACGCCGATGACATCGCG 5299 31 100.0 35 ............................... GATATAAGGCACTAGGTAACAGCATGGCGGTAAAG 5233 31 100.0 35 ............................... ATCAAGCCAAAACCTGCAATCTTACCGCCTGAATG 5167 31 100.0 33 ............................... ACCTTCGGATAAACCAATAATCATTTTTAGGCG 5103 31 100.0 34 ............................... CAAGATGGGCTACCACCTAGACAAGGATTTGATG 5038 31 100.0 33 ............................... TTGGTACGCTTGGCAAATTCATCTTACTCATAG 4974 31 100.0 34 ............................... CATGTTGCGAAAAATACTATCGCGCTCGTCGCGG 4909 31 100.0 35 ............................... TTGTCTCAGTACGTGCAAAAACTAAAGCTATGCAG 4843 31 100.0 34 ............................... GTCTTGTAGCGACACAGTTTGTTTTTCTAGCTGG 4778 31 100.0 34 ............................... TAATAATATCTGCATAGTAGGGCTTATCGGTACG 4713 31 100.0 34 ............................... ACGCAGACAACGGTATATCACGCAGGACGTTTTG 4648 31 100.0 36 ............................... AAACATGAATGGGAAGTAAGCAAAGCCGCTATCGCG 4581 31 100.0 34 ............................... AATTTGGTCAGGACGGCAAGCTATCGACCTACCG 4516 31 100.0 34 ............................... TATTCGAGATCATAAATGAGATAGACGGTGATGG 4451 31 100.0 35 ............................... GCAAATGGCGCTTTGGTGATTGATAAGGCTGCAAG 4385 31 100.0 34 ............................... CCACACGCTATCTCGATAAGTCTTGCTGTTAGCG 4320 31 100.0 34 ............................... ATCTATAGCGTATGTGATGCTGAAGGTAATTTGG 4255 31 100.0 35 ............................... TGTAGAATACATTGCCTGAATGGTCTACTAATACG 4189 31 100.0 33 ............................... AACTGCTGCTCAATCTTGTGTTCTGTATGTCGG 4125 31 100.0 35 ............................... GGGTATGGTTACGGTTTTTGTTGGTTTGATGGTGG 4059 31 100.0 33 ............................... ATCAGGCTCAACACAACGAGAAGCCATATCAAG 3995 31 100.0 37 ............................... ATCAAGACCAACGTCACCAGTAGTGGCAAAAGGAACG 3927 31 100.0 34 ............................... ATGTTGACCACTACCAATTGACATGCTCACCTAG 3862 31 100.0 34 ............................... ACCTAAGCTTGCGCCTGTTACTTTTCCAGCATGG 3797 31 100.0 34 ............................... TAACGGTTTTGCTTTAATAGCGGGTAGTTTCAAG 3732 31 96.8 33 ...................A........... TATACTCATATTTATTATTCTTATTAATTATAG 3668 31 100.0 34 ............................... ATAATTTTTCCATAATCTAAGAACCGAATCTTCG 3603 31 100.0 36 ............................... TGTTGCATCTGCGACATTAATGACTTGACGCTTAAG 3536 31 100.0 34 ............................... TAGAATATTTTTATTCAGGCTTGCGGGGCATTTG 3471 31 100.0 34 ............................... GCGTGTGATACGCCGCAAGTCTGAATCAGGACGG 3406 31 100.0 41 ............................... TAGGTCTGTATTAAAAGTACCTAGCCCTGAAGGGTCTACGG 3334 31 100.0 34 ............................... ATCTATAGCGTATGTGATGCTGAAGGTAATTTGG 3269 31 100.0 35 ............................... CTGATCCAAAGTCTCAAAGATATAATCTATCTGCG 3203 31 100.0 35 ............................... TCATAACCTATGATTGCTCTAAGCGCTGGACCAAG 3137 31 100.0 33 ............................... TTGCAGCACATGAATGGTCAAGACCGCTGGATG 3073 31 100.0 35 ............................... ACCTCATCAATCAACTGCTGCAACGCCTCACCAAG 3007 31 100.0 33 ............................... ATTACGTGATTTAGCAATATCTAAAGCTGATAG 2943 31 100.0 35 ............................... AATATCAATCTGAATCAAAACTAAACTGATTCAGG 2877 31 100.0 34 ............................... TTTAATAGCTGCTGTAGGGCTTGTAATAGCGTTG 2812 31 100.0 34 ............................... TTGTCCTGCGCGATAATACCGCAGCGCTGGTCAG 2747 31 100.0 35 ............................... CGTTTCTTGAATGGCAGTCACAACACCCACCATCG 2681 31 100.0 35 ............................... TTTAATTAGTAAAGACGTAGGTAAACTACCTTTAG 2615 31 100.0 34 ............................... TAAATCATGTTTAGAATAGTTTAAAGAGGTGGTG 2550 31 100.0 36 ............................... TTATTGGTCAAAGCGAACTTTGCGTCAGTGTCGGCG 2483 31 100.0 34 ............................... CTGCATATTTACTGTTATGTTCTGTACAAATTTG 2418 31 100.0 35 ............................... AATAATGGCTAGTAATGGGCGTTGTATGGCTTATG 2352 31 100.0 34 ............................... GTGGTACAAGTGAATACACCCAGTACGATGCAGG 2287 31 100.0 35 ............................... GCTACCTGATGCTTGCCAAGCCCTTCTTGGGATTG 2221 31 100.0 34 ............................... TTGCCATAGATTGACAGTAGCAGCACCATTTTTG 2156 31 100.0 35 ............................... GATACGTGGGGCGCGACGTGCCAGCGAGGTACGAG 2090 31 100.0 35 ............................... CTTGCCGTCCGCTCTCTCGGTGGTTGAGATCGTGG 2024 31 100.0 34 ............................... TAGCTACCTTTGCATAGGAAGGACATTAGAAGCG 1959 31 100.0 34 ............................... TGATATAGTCGCTTAACTTGCGTGTAGTGAATAG 1894 31 100.0 35 ............................... GTTAAACTCTCGCTGCATCCGCTGTTTGTACTCGG 1828 31 100.0 36 ............................... TTACTTAATCAGTATGAACAGATTAAGGATACTAGG 1761 31 100.0 33 ............................... TTCTAACTCTTATCTGCCACCCTGTAGAAGCTG 1697 31 100.0 34 ............................... CGCTTGAGAAGCCATGCTGGTATAGTAACTATCG 1632 31 100.0 35 ............................... ACCATAGGTCTCACCGCCACGGTAACTACGGATAG 1566 31 100.0 34 ............................... CTAGTGATTCTAAGTAATGATTATTCAGAATCAG 1501 31 100.0 33 ............................... CCCATGCTTCACCATAAATATCTCTTACAGATG 1437 31 100.0 34 ............................... TAATAGCCCCTTTACTTTCAAAGTAACTTACTAG 1372 31 100.0 35 ............................... GATACTCGTTTTTACTTGCGTCACTTGCGCCATTG 1306 31 100.0 35 ............................... CGCCTAGGTGGATTAGAAGTCCGTACTAAGGGTGG 1240 31 100.0 33 ............................... TTACAGCTTTAGAACGTACAGCAGAAGTACAGG 1176 31 100.0 35 ............................... TTTAAGTAGCATTTGCTCATCTGCTGCTAGGCTTG 1110 31 100.0 35 ............................... TTTAAGTAGCATTTGCTCATCTGCTGCTAGGCTTG 1044 31 100.0 35 ............................... GTGACATAGATATAGGATGCGCGTAAACAACGTCG 978 31 100.0 34 ............................... ATTGTTCGCGTGCCAGCCTTATGCTTCTCAAATG 913 31 100.0 34 ............................... TGCTATGTTTGATAAAAACGATAATCCCACTACG 848 31 100.0 34 ............................... GTAAAGTTACCGTATAAGGATTATAAAGATGGCG 783 31 100.0 35 ............................... ATCGCGCCACCGCTAAACAGCAGATTAACCACTGG 717 31 100.0 35 ............................... TTCACACTCTTTTGTGGCTAGCATAAGCCAATGAG 651 31 100.0 37 ............................... CTCATCGCTTATATGCTCAAATGCCTCATATCTAGCG 583 31 100.0 34 ............................... TCACCCATTAACACTATTTGATTATTATCAAGCG 518 31 100.0 33 ............................... ACCAACGACCACTCAATGATGCACGCAATGGCG 454 31 100.0 35 ............................... AGCAGAACGGGCAGCCATCGAACAGTCCTACATGG 388 31 100.0 36 ............................... CGCTTGAGATTGACCGCATAAGAGCAAGCGAGCTTG 321 31 100.0 34 ............................... ACCAGATTAGCAACAGTAGGGGAGTATACGTATG 256 31 100.0 35 ............................... TTCATAGAGCATAATAGGTTAACCGAGGCTTTAGG 190 31 100.0 33 ............................... TCCCAACACTGTTCATTCTCTCCCCAATCAAGG 126 31 100.0 35 ............................... TTCATAGAGCATAATAGGTTAACCGAGGCTTTAGG 60 31 100.0 0 ............................... | ========== ====== ====== ====== =============================== ========================================= ================== 126 31 100.0 35 TTCGCACCTTCACGGGTGCGTGGATTGAAAC # Left flank : GATGCAAACTTTGCAAAACGGTTACGTCACGTAGCCAAGCACTGTCTAAACTTTGGGCAGCGGGTGCAATATTCGGTATTTGAAATCGAGGTCAATCCTGCGGAGTGGGCTACTCTTAAAGCTAAGCTTGAGGACATTATTAATCATGATGTAGATAGTTTACGTTATTATTATCTTGGTAAAAACTGGCGGAATAAAGTGGAACACATTGGAGCAAAACCTGTGCTAGACTTAAACGATGTACTGCTATTTTAGCGGTTGTTATCATAAAATCTATTATTTGACCGTAATAAGGTCAATGCGAACCTATAGCGTACATAAAATCTCTAAGAGACTCGCAAAAGAGGCGTAATGCTATTTAACAACCTGATTTTATTACCTTTATTTTTTTATAATAAAAATTTAGTGAGTGTACTACTTGCCAAATTCGCTTGTGGTTTAGACGTTCGCAAATTCCAAGGTTTTTTCTTAACCTTATTAGTGACTTAGACCATAGGCAG # Right flank : CTCCCAACACTGTTCATTCTCTCCCCAATC # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TTCGCACCTTCACGGGTGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCACCCTCACGGGTGCGTGGATTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-4.30,-6.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [25.0-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,9.64 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //