Array 1 426364-425132 **** Predicted by CRISPRDetect 2.4 *** >NZ_WKMY01000001.1 Parabacteroides distasonis strain BIOML-A9 scaffold1_size909884, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ====================================== ================== 426363 33 97.0 35 ................................C AAATCCTCTTTGATCAATATGCTTACCAACAAGAA 426295 33 100.0 34 ................................. TGATGGAGTTAATGCGGATGCCCGTCCGTTAGCC 426228 33 97.0 33 ................................C TATCTCGGAAGCGTATTGAGCGAAAGATTTACG 426162 33 100.0 38 ................................. TGGCCCGGCAAAACGGGAACAAGTATCGGTTCCCGACA 426091 33 100.0 33 ................................. TGGAGTATTGGCACGAATCCCACTCATCTATCT 426025 33 97.0 33 ................................G ATGGTTAGGCGGTTAAGCCAAGAAGCATATTTT 425959 33 100.0 34 ................................. CTTTTTTTCTTTTTGACATCAAGACGGACTAAAA 425892 33 100.0 32 ................................. CAATTAAGAAATCTCCTTTTTTATCAGCAGAC 425827 33 97.0 35 ................................A TGGATCTCTACGAGCGTGTGAAGGACGTGCTTTTC 425759 33 100.0 34 ................................. TCTTAGCCATTTCAATCCTTTATGCCTTTCTGAT 425692 33 97.0 33 ................................C CGTGGATAAGCACAAAAGATAAGTTACCTGATG 425626 33 97.0 34 ................................C TAAACTTAAATGATAGCTCGAAATTACTCATGGC 425559 33 97.0 33 ................................C TCACGATAGATAGAGACAGCTTAGGGTTATGAA 425493 33 100.0 32 ................................. ACAAGCTCCACGACATAGTGGAGGGTAAGGCC 425428 33 100.0 34 ................................. TGGCCCAGATGCCGTCCAGGGACCCGGAGAAGGT 425361 33 97.0 32 ................................A TGAAAGTTAATAGGCTCGAACGACAACGATTC 425296 33 97.0 33 ................................A TGGAGCACCTTGCGCAACTCGTCCTCAGGAGGA 425230 33 97.0 33 ................................C AACACTCCAACGGGGTGGCCTCCGGATGGTCGT 425164 33 97.0 0 ................................A | ========== ====== ====== ====== ================================= ====================================== ================== 19 33 98.3 34 GTCGCACCCCGTGTGGGTGCGTGGATTGAAACT # Left flank : TGATAATTATCCGGTATTTCTAATAAAATGATTTACGATTATGCATATTCTTGTGACTTATGATGTGGATACTACGAGCAAAGAAGGAGCTCGCCGCCTACGCCATGTGGCTAAGGCTTGCATAGATTATGGCCAAAGGGTACAGAATTCTGTCTTTGAGTGTGAGGTGACAGAAGCACAATATTGTCTCTTGATTGAACGAATCAAGCGTATTATTGATATGTCTCTTGATAGCGTTAGATTTTATATTCTCAATAAAAACGAGAATAAAAGGGTAAAAGTGATAGGTGTTGAAACTGCTTACAAAGTTAATAATGCTCTTATCATATAATTTATGCGAATGTGGAGTATTACGAAAAAAGTAGTATTTTCGCACCCCTTAATAATTAGCAGATTAACCCGTCTTTAAGGCGATTGCAGCCATTAAGCTGAAATAAAAATGAGAATTCGCATATTAATAGGTCTAATTTATTGACTTATAATATGTAACTTTGCACACT # Right flank : TTTGTAAAGCGCAAGCTTTTTCATAAAAGATATACTTACGTGATGAAGTATATCTTCTATGGGACTTGAAGTGTTCTTCTGCGACGAAGGGATTAGTACTTCGTAAAAATAACTTTTTAAAGTCACTGACTCTGACATATAATTTCGCTTAGTTATTTCTGCAAAAATCATTCATATGTAAACAAGTTTCGTATATTCGCGACCTTATAATAGTTTAAATATGGCAGAGGAACTACGGATTAAAAACGGTGATAAACAGGAGATGTATGAGACGTTGCTCCCGCAAATCGCCTCATTGGTAGGTAACGAGACCGACCTAATCGCTAACATGGCGAACATCGCTGCGGCACTCAAGCAGACTTTCGGTTTCTTTTGGGTAGGTTTCTACCGGGTCATAGACAATCAGTTGGTATTAGCGCCTTTTCAAGGCCCTATCGCCTGTACACGTATAAAATACGGAAAAGGGGTATGCGGCACGGCCTGGAAGGAGGCTCGTACGA # Questionable array : NO Score: 5.81 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.64, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACCCCGTGTGGGTGCGTGGATTGAAACT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [7,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCACCCTGCGTGGGTGCGTGGATTGAAACA with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.60,-4.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [71.7-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.74,9 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 116504-116780 **** Predicted by CRISPRDetect 2.4 *** >NZ_WKMY01000007.1 Parabacteroides distasonis strain BIOML-A9 scaffold7_size225822, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 116504 47 93.6 30 A......C...................C................... AGATAATTCTACTAAAGGATGGACAAATTA 116581 47 100.0 30 ............................................... GAAGATGGTGGAGCTGCGTTACTCCCTCGT 116658 47 100.0 29 ............................................... AATTTTTGTCGTTAATCCGGCACCATTAC 116734 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== ============================== ================== 4 47 98.4 30 GTTGTGATTTGCTTTCATTTTAGTAACTTTGAGCCATTGGAAACAGC # Left flank : ATCTAAACGCTTGGAGAATCGATTACTTCGAGGCAAGGTACGGCTTGCTTCCAAATTCGAAAATATTTTTTCACAATAATCTATTGAACAACGTATTACAAATTTTCACTGATTTATTCTAGCGAAAGATTTCGTCTTCTGTCAACCTCAGTCGGACAAACAAGCGACTTTTTATCTGAAAACAATAAGCTTTTCATCCGAAAACAATCGGGTTTCCGGTCGGAAACAATAAAGATCGCAGTCGAAAACAGCATACAACGCCGTTATAAACACCTTACTATTGGATCATAATCCCTCTACAAAGCCTATTCATACACTAAAAAATGGCGAAATACGCTGTTTCCGCCTTCCTTTTCTTTCTATTCTCGCATTTCCATAAAAAGCCTTTATCAGCTAAAAGTCTCCATTTTGAGCAAAATGACAGGAAAATAGATATTTTGATGACATCAAAGAGAATGGCTTACTTTTGGTACAGTTGCCCCAATATTTTGCAATATTTA # Right flank : CTTATTATTTATTAAAAGCTATTAATCAACGGATTACAAAGCACATCAGAATTTAAAAAACAGATATTGTTTCCATTAAAAATTCCGCTTGACAGCGGGATTTTTCTTTTAGAACAACTCCAATTGCTGTCCAGGAGTATTCACTTCCACCGTTTTCTTTCCATAAAAAAGTTCAATATTCCCAAACTGCTTATCCGTAATACACATGATTCCGACATTCCCATGCTCCGGGAGGAAAGATTTAACTCTTTTTATATGTACGGCCGCATTCTCGCTACTGGCACAATGACGGACATAGATAGAAAACTGAAACATCGTAAATCCATCTCTTTGTAGATTTTTCCTGAAATCCACATACGCCTTTTTCTCCTTCTTCGTCTCGGTAGGCAAATCAAACAACACAAGTACCCACATAACACGATATTCGCTAAACCGATCCATATTACATTTCCGGATAGGAGATTCTACGCAATTCGCCACTAAAGCACTTATACAGAGAA # Questionable array : NO Score: 5.78 # Score Detail : 1:0, 2:3, 3:0, 4:0.92, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGATTTGCTTTCATTTTAGTAACTTTGAGCCATTGGAAACAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.83%AT] # Reference repeat match prediction: F [matched GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGAAACAGC with 92% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-2.10,-0.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [66.7-78.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.68 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //