Array 1 5829-5012 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAGWCS010000130.1 Clostridioides sp. ZZV15-6598 ZZV15-6598_539, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ======================================= ================== 5828 29 100.0 37 ............................. AAATTTCTTAGTATTTTTTCATCTACAAATTTTAACG 5762 29 100.0 36 ............................. GTTATTTAGAATTTATTATATATCAAAAAATCTAGG 5697 29 100.0 36 ............................. ACGTTGCACGGTCGTAACGTGTCAATCCTATTGGGT 5632 29 100.0 36 ............................. TCAGCAAAACGGTCTAGTATATTACCCAGTATTCCA 5567 29 100.0 36 ............................. GCAGTTGGTGCTTTAGCTGCGATTTTAGGTGCATTA 5502 29 100.0 37 ............................. TTGGGAATGCTTGGAATAGCAGCAGCGAAAGCAGGGG 5436 29 100.0 36 ............................. TTAAGGTAAACTAAGTAGGATGATACAATACTCAAA 5371 29 100.0 37 ............................. GACCAAAGCAGAACGGATTTAGGTCAAAGCTATAACA 5305 29 96.6 36 ..........T.................. CAAGGCATACTAGGTATAGACATTACTTCTATATCA 5240 29 100.0 37 ............................. GGGTTTGTTACTGTTTGTGCTGAAGAGTCTCTATTTG 5174 29 100.0 37 ............................. TTTATATCCATTTCTTCACTGCCTTCAAGTCTCAATC 5108 29 100.0 39 ............................. ATAGTAGTATAGTCTCCTTTTAAGTTATTCCATTTACGA 5040 29 96.6 0 .......................G..... | ========== ====== ====== ====== ============================= ======================================= ================== 13 29 99.5 37 GTTTAAATTACACTAAGTTAGTTATAAAT # Left flank : AATGATATGTTAAATAATGATACTATTAGTGTTGTGCCTAAATGTCTTTTAGAAGAGTACAAGTTGTATATTGATAAAAAAATGTATTTAGAAGCGAGTTCATTATTTGTAAATGTATCTGTAAAAAGATACAATTATAATAAAAAGATGTTTTATGAATGTGGAGATATAGTAGTTACAAGTTATAGTTATAATGACAAACTAGGTCTAATATTTGATTAGATTTTTAATTAAATATTGATTATTAAGAGAATTATAGTATAAATAATTAAAATATTTTATTGAGAATTTGTTATAATTTATATCTACTACAAGTTTTATATGTTATAGTAGAATAATTTTGCAGTGAGCGAAAAATATGTGTGAATGTCTGTGAGCTAGTGATGGCAAGGTTTATAACTGTGTTTTTGTTTTTAGCTAAAAACACTACTGGTGGCTCACTGCAAATTACCTATTTTAATAACCCTACAAGTGTTGGAATTACTATAGTTTTATTTGGG # Right flank : TTACTTATTCATTAAAAAACTTAACTAAGAATTTGATTTATATTATTGAAGTATCAATAATTTTGGAAAGTAGAAAATTATACCCCAATAATACCCCAACTACAAAAATAAACAATGAAAAACATTGAAAAAAATTAGTCTAATATCATAACTAAATAGCCATATACCTACATTTACAAAAACCAACAAAACAATCAAATAACTACTTATAGACTCCCCTCGTCTCCACCATTGAAATCCACGAAAAATATTAGCAACTTGCTAATATTTTTTTATTTGTAGAAAATCAATCGAAATGTTATATAATAACTTTATACAACAGATATAAAGAGGTGAATCTCATGGCTAAAATTGATAATATGATGTCTATACTATGGATGTTAAGCTCCGATAAAAAAGTTACAGCAAAACAAATAGCTGAAAAGTTAGAAATAAACATAAGAACAGTGTACCGATATATTGATGTACTTTCTGCGAGTGGAGTACCTATAATTTCAGAT # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTAAATTACACTAAGTTAGTTATAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:82.76%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.30,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [85.0-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.41 Confidence: LOW] # Array family : NA // Array 1 40916-40622 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAGWCS010000008.1 Clostridioides sp. ZZV15-6598 ZZV15-6598_417, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ====================================== ================== 40915 29 100.0 37 ............................. TCTCATAACAACGCTATATATGTAATAAATAAGCATA 40849 29 100.0 38 ............................. GAAGTTATTTCTGCTATTGCAACTACTTTAGTTTGCGC 40782 29 100.0 37 ............................. TTCTACATCATAATAATTTACATGTTATAATTAATTT 40716 29 100.0 37 ............................. GTTTCATACGAAGAAATTTGAGAAAGTGATAGTCCTA 40650 29 75.9 0 G...................C.AAC.G.G | ========== ====== ====== ====== ============================= ====================================== ================== 5 29 95.2 38 CTTTTATATTAACTAAGTGGTATGTAAAT # Left flank : GCTGTGGTGTTTATGTAGAGTCTGAATTTGATTATCTAAAACAAAATGATTTAAAATGTTATGAACAAAGATTAGTTGAAAATATGATTGAAGTATAAGCTTTAAAGAAATTTATAAAAGAGGATATTTCAAATTTTTATTTTGAGGTATCCCCTTTTATTTGATGCAAAAATTAAAATATAACTTAAATAAAAATGTATAAATAATTTATAAAATAAATTAAATAATAAGTTTTATAAAAATGTATATATAAACTCAAATTATTTTGGTTTTCTATATTCAGTTTATTTAATAAATCGAAATTCTTATTAGATAAATTATGCTATAATAAATATATAAATATGCAATGTGCGATACTTTGAAAATAAACGCTGTAAGGGTTGTAAATACTGAATTACAATGTGTTTTTGGAAAATATCAAAAAACACTATCTTGTGCTCACTGCAAATTTTAATATTTTCTATATCTTAAAGTATTGAAAATGCTCAATTTATTTTGGG # Right flank : CAATTTTTAATTGCTCTGTTTTTTATTTGCAAATTTAAGATAATAAATTTTATATGGTAAAAATTGGAAGTTAATTATTGAAAAAATAGGTACTATACTTGTAGTATAAAGAAGATATATATCGAAATAATACATATAAACTACGTACGTAAAACAATTTTAAAATAACCATAATCTTTAATTTCAAATTCATCTTAGAACATGACATACGCAAGTAAAAAATATGGAATATATTAGTTTCAAAAAACTTCAAATGAGGGAAGATGTCTATTGTTTTTCGGAAATAGAGGAATTGTAAAAAAATAAATCAGAATATTTTGAATATGGGGGGATATTATGGGAGAGTTAAAACTTGAATCAAAAATGAATTACACTAAGAATAAGAAAAGAGTTGCTATCTCTATACATCGAATGAAAGAAATCTCTAAAAAAGATTATAACTTTTTAACAGATTGCATAGAAGCATTTTATATAAAAGTAAAAGAGGTTTGATAAAGTTC # Questionable array : NO Score: 5.82 # Score Detail : 1:0, 2:3, 3:0, 4:0.76, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTTATATTAACTAAGTGGTATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:79.31%AT] # Reference repeat match prediction: R [matched GTTTTATATTAACTAAGTGGTATGTAAAG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,-0.50] Score: 0/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [83.3-78.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.91 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], //