Array 1 156982-154109 **** Predicted by CRISPRDetect 2.4 *** >NZ_CEKE01000067.1 Streptococcus suis strain S95G, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 156981 36 100.0 30 .................................... TCTTCCACAAACGGCAAGAGCGAAATAAGT 156915 36 100.0 30 .................................... TTACCTGTTTTCTGTTCGACAATTTCAATG 156849 36 100.0 30 .................................... ATCCGAGTTCAATTCGACTCTGCTGATAGT 156783 36 100.0 30 .................................... ACGTCCCAACCTCTCGCAAACAGCTTCCAT 156717 36 100.0 30 .................................... GTCTTTTTGCGTTGTTGTGCTACATAATGT 156651 36 100.0 30 .................................... GCCGTCTTCCAGGAAAAAATGAGGAGACAC 156585 36 100.0 30 .................................... AGCTGAGGTGTCTGTCAATCTCTTTCTTAA 156519 36 100.0 30 .................................... ATGACTGGTTGATACGTAACGGATATGTTT 156453 36 100.0 30 .................................... CTAATCTAAGGCTATCCGACTGTCGCAGGC 156387 36 100.0 30 .................................... TTGTGCCTTATCATCAAAATACATTTGACC 156321 36 100.0 30 .................................... GTCAAGACTTTCTTATGTGTTCATGATTTT 156255 36 100.0 30 .................................... ACCACTGGTTGCAACAGCGGTCCTCCGACA 156189 36 100.0 30 .................................... GTGCGTCCTTCAAGTTTCGTAGTCCGCTCT 156123 36 100.0 30 .................................... CTAATTTCGTTGAGTGGGCACATAACGCTT 156057 36 100.0 30 .................................... TGCAGGCCATATCGCAGTGCGTCCATAAGG 155991 36 100.0 30 .................................... TTTGCAACTCCAAACTTATTAAATTCAAAC 155925 36 100.0 30 .................................... ACGGATACGATGCTAATGAACGCCTGGTTC 155859 36 100.0 30 .................................... CCTTGGTTCTGTAGAAGAAGATTTAGGCTA 155793 36 100.0 29 .................................... ATTAGTATCTACCACTATACCCACTAAAG 155728 36 100.0 30 .................................... GCAAAACGAAAACTGAAAGAGTACCCTCGC 155662 36 100.0 30 .................................... GTACGTAAGGAGCTGGACCAAAGTCTGCTT 155596 36 100.0 30 .................................... GTAATGGTTACGACGCATGGGCGATTGGTG 155530 36 100.0 30 .................................... TCTGATAAGGACAGAATACTTTGTCATCCT 155464 36 100.0 30 .................................... TAAAAATCCTAGGCGGTATCATCGAGTTTC 155398 36 100.0 30 .................................... TAAAAATCCTAGGCGGTATCATCGAGTTTC 155332 36 100.0 30 .................................... ATAAAAATAATCAAAGTATAAACGTAAAGC 155266 36 100.0 30 .................................... ATTAGCGAAGTCCCATAGTGCTTTAGTTCT 155200 36 100.0 30 .................................... GTAAGATATATATAGTATATCATGCGTGCT 155134 36 100.0 30 .................................... TACTGAATCACTTAATCAAACTACTAAACT 155068 36 100.0 30 .................................... AACAAGCCTTTGAAAACTTTGTTACAGGTT 155002 36 100.0 30 .................................... CCATCTTCAAAAGTGGTAGTGACTTGGATT 154936 36 100.0 30 .................................... ATAATAAAACATCTCTAAACCTCACAAAGC 154870 36 100.0 30 .................................... ATTAGCGAAGTCCCATAGCGCTTTAGTCCT 154804 36 100.0 30 .................................... GAAGAGTGAACAAAGCGAAAATTAAACGCT 154738 36 100.0 30 .................................... TAAGGGTAAGGCAGTAAGCCTTGCCTGTTA 154672 36 100.0 30 .................................... ACACCGTTTGTAAATAAGTGGTAGTCAAGG 154606 36 100.0 30 .................................... AATGAATTTTGCTTTTAGTGAATTAGAGGG 154540 36 100.0 30 .................................... GATGATTCACAATCCATGGACATTTGCCTA 154474 36 100.0 30 .................................... CTTATCTATATGATCTTGTCAATTATAGAG 154408 36 100.0 30 .................................... GTTTGGCACGCAAGTCGAAGCAATTGATGC 154342 36 100.0 30 .................................... TGGAGCTGATACAGTCTCTGCTTACAATAT 154276 36 100.0 30 .................................... GATATGCTTATGAAGATTTTGACTATATCA 154210 36 100.0 30 .................................... TAGAGCAGACTGAGCTACTTTCAACTGCTC 154144 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 44 36 100.0 30 GTTTTAGAGCTGTGCTGTTTCGAATGGTTTCAAAAC # Left flank : GAAAAACCAGAAGTGAAATCAATTATTGAAAAATTAGCAAATTCTATTACTGAACTAATCTCTTATGAATGTCTAGAGAATGAGCTTGATTTGGAGTATGATGAGATTACGGTTTTGGAGTTGATAAAGGCGTTAGGGGTCAAAATTGAAACTATCAGTGATACGATTTTTGATAAAATTTTTGAGATTTTACAAGTTTATCAATTTTTGAATAAGAAGAGATTTCTTGTCTTTATCAATGTGTTATCTTATTTGACGGTGGATGAAATTCAGAAAACTAGGGAGTATATTGAACTTTCCAATATGGATGTTCTTTTTCTAGAACCGAGAAAAAGAAAAGATTTCCCTCAGTATGTTTTGGATAAAGACTATTTCTTACTATCGGAAAATATGGTAAAATAAATACATACAGTACAAATATTAGAAACTATTCGAAACTGAAGTCTGGCTGAGACGAATGGCGCGATTACGAGATTTTGTGACAAAAAATAGTCTACGAG # Right flank : CGTTAAAAGACAAATTGATAGGGTAGTTAGTTTTAGAGTTGTGTTGCTCTAAAAAGTTCTTTTAATTCTTAAAAGCAATGTAGCAAAAATATTTAAGTGTCAAAAAGAAAGGGGATTGTAGATGGATTCAAAATCAATTATTATAACGTCTGGTTATAACAGTAGTAGTGAATATTTTAACTTTAATCATCAAAATAATTGAAAGTAAAAAGTATAGATGAATTTGATTTAAGCTTCATTTTTTTAGGATAAAAACTAGTGCACAGACAAGTAATTCTCTACCATAAACTTTCAAAGTTAAAATGATGATTAACAACATCCAATTTTCCTCCAAGATTTCTAACTGACTCTTGTCCCACCCCCTTTTCCATGCTATACTAAATATTATCGTTTTACTTCAAAGGAGACAAAGATGACAAACCTAAAAGAGCAGGTTGGGATTAAGGCGGCGGAATTTGTGACGGACGGGATGATTGTTGGGCTAGGAACTGGTTCGACGG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTGTGCTGTTTCGAATGGTTTCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:61.11%AT] # Reference repeat match prediction: R [matched GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC with 98% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-0.20,-2.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [68.3-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,4.87 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //