Array 1 106122-106619 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_LS483369.1 Neisseria cinerea strain NCTC10294 chromosome 1, complete sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence               	Insertion/Deletion
==========	======	======	======	====================================	==============================	==================
    106122	    36	  94.4	    30	............A.........T.............	GTACCGGAGCCGCGTTTGCCGACACGGATA	
    106188	    36	 100.0	    30	....................................	ACTTTCTAATTTACAACGCCTCCACCTATT	
    106254	    36	 100.0	    30	....................................	AATAATGACATCGCGTTTAATCTCTTCTTC	
    106320	    36	 100.0	    30	....................................	CCGCATGGTCGAATGGAATGCATGCGGAGA	
    106386	    36	 100.0	    30	....................................	GGCGTGAACGGTGCTGATAAGGCTGTTGCA	
    106452	    36	 100.0	    30	....................................	ATTGTTTTAATTGCCTTTAAAAGGACGATA	
    106518	    36	 100.0	    30	....................................	TTCTATCTCTTGGGGTGTGAAGTGTTGTCC	
    106584	    36	 100.0	     0	....................................	|                             	
==========	======	======	======	====================================	==============================	==================
         8	    36	  99.3	    30	GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT	                              	       

# Left flank :   AACGGCGCAGCGATTGCAAACGCAGGGAAGAACGCGACATGGCAGGACTGTCCGAACGCATGGTGGCAGAGTTAGACAAGCACGGGGCCGCCGTATTTTTCCGAGAATATCCGAATGCCAACCACGGCAATGTCCCGTTCCACTCGCTGACCGACTGCGTGGAATATTTGAGGAAGGCTTGGCAGAGGTAGGGAATCAGGGGTGGGCATAAAAGGCTTATCGCAAGGTTGGAAGCCAAGAAGACCAAAAAAGCCGTTATCGCCGCATTGATGCGTAGGCTTGCCGGTACATATCACATAGACAAGAAAATCGAAGATGACGGCTCATCGCGTTATAAACCAGCGTAAATCCCGATAAGAAAAAAGGCATTTCTTTTGAAACGCCCGCCTTGCTGTGTGTAAAATCCTTTCAATTTTAAGGATTATGTTATCGATCAAAGGAGTATCTTTTCCATTTCGCAGTGCTATAATCGCCGGTATTTACACCGTAGGCATAAGCTG
# Right flank :  TACCTCAATGGGAAATCCTTATTATGTAAGGGTTTCCCGTTTTATTTGTTCTGAAAAAATGGGCTTAAAATAACAATAATTGGTCTGAATTGACCTTTTTTTCTTGGGTTTTCAGCTCGCCCAACAGCAGTTTCATGGCGGCATATTGCTTTTCTGTTATCTCCAAACAGCGGATTGAGCCTTCTTGCGGAAGGTTTGCACACAGCCTATTGTGGTGTTTTTGCAACGAATCGCGGCCTTTGACGATACGGCTGTATACGGAAAGTTGGAGCATTTGGTATCCGTCTTTTAATAAAAACTGGCGGAATTGATTGGCGGCTTTGCGCTTTGCGGCCGTGATAACCGGTAGGTCGAAGAAGACGATAATCCTCATAAATTTGGCCTCACTCATATTGGTATTCTTTCAATGGTAAGATTTCAGGCAGTTTCAGTTGTTTGGCGTTTTTATCGGTTACGCCGGCTTGAAATGAAGAAACCATTTTGTCGATGGCGGCCAAGGT

# Questionable array : NO	 Score: 6.22
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:55.56%AT]
# 	Reference repeat match prediction:         F [matched GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  NA [-0.40,-0.90] Score: 0/0.37
# 	Array degeneracy analysis prediction:      R [2-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: R [56.7-66.7]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [4.5,0.68   Confidence: HIGH] 

# Array family : NA
//