Array 1 150993-156475 **** Predicted by CRISPRDetect 2.4 *** >NZ_JSUS01000001.1 Acinetobacter sp. A47 contig_3, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 150993 30 100.0 30 .............................. TAGGTTCGCCCGTCGTAGGGTCTTTTTCTT 151053 30 93.3 30 ............................GA TGTTCTCCGGCTGTATTAAGTACAATGGTA 151113 30 96.7 30 .............................T AGCAATCAACAGAGCCGTTAGAATTGTTTG 151173 30 100.0 30 .............................. ATCAGGAAGCCGACCAACACAACAATTAAA 151233 30 93.3 30 ............................TT AAATTCAATTAGATCAACAAGAATCTGTTT 151293 30 96.7 30 ............................G. TTTATGATTTAACTAGGGATTAACAGAAAA 151353 30 100.0 30 .............................. CATACCAAGACATCATGCGTGAGCTTGGTA 151413 30 93.3 30 ............................GT TAAAATGCTTTACTAGCTTGCCTGTTTGAT 151473 30 93.3 30 ............................GA TACATGCAGATGCCCATAACATATAACCTG 151533 30 96.7 30 ............................T. TTTCTTTCTTAATCTTTGCAAAGAAAGTCA 151593 30 96.7 30 ............................T. ATGTTGCAAAAAGTATTATTGCTGAGCAGA 151653 30 93.3 30 ............................GT AGTCGTGCTGGAATTTCCGAATCAGGTAAT 151713 30 96.7 30 .............................A TACTCAGTGACTGCCCATATCCCACCACAA 151773 30 96.7 30 .............................A CCAAAAAAATCTTTAATTGATTGCCAAAAG 151833 30 96.7 30 .............................C TGTTTTATCGGGGGGAATGAAAAAGGAAGC 151893 30 93.3 30 ............................TC ATCATAAAAAATCACTGAACCATCCGGACA 151953 30 96.7 30 .............................C TCTGTGATGACTGAGCCTGGGCAAAATAAT 152013 30 100.0 30 .............................. CCTGGAACATTAATCGGATTAGATGTAACC 152073 30 93.3 30 ............................GA ACTGACACATAACGATTTAAAACCTTCTCT 152133 30 96.7 30 .............................T TCGGTTTAAGCACCCGGAAGCACTCAGCGA 152193 30 93.3 30 ............................TT GGCATCATAGCTGCAACAGATGGTCATAGA 152253 30 93.3 30 ............................TC GTTAATTTCCTTGGCAACAGTAGTTTTATC 152313 30 93.3 30 ............................TA ATCATGTCTAACGTTCCAATTAAGACGATT 152373 30 96.7 31 ............................T. ATGTCAAATCAGGCTAATGCTGAGCATCTAT 152434 30 93.3 30 ............................TC ATAAAGATGACACTCTCTGCCAGTATCCTC 152494 30 100.0 30 .............................. TACGCTTTGCATCATGGCTATTAATCAGGT 152554 30 96.7 30 .............................T TCTGTCTCTGAATAACAATGACATGCTCAC 152614 30 96.7 30 .............................A AAAGGCCAGCAAAGAGAACAGCAAAAAGTA 152674 30 93.3 30 ............................TA ATGTAAAAATCATTTGGCAACGCCCCACAC 152734 30 96.7 30 .............................C TGTTAGAAGCTGCGCCTTGATAGCCACTGT 152794 30 93.3 30 ............................TC TTGGTTTTCCAGGGTTGAAAATCAATAAGA 152854 30 96.7 30 .............................T AATCACCACTGTTAGAAGCTGCGCCATAAT 152914 30 93.3 30 ............................TA GCTAAAGCTGTTGAGGTTTCACGCCTCAGC 152974 30 96.7 30 .............................C TACATTGTGTCCGGCCTTCCGCGCAGCGCC 153034 30 93.3 30 ............................TT TCACCGGGCGCGCGTGAGTTCTTACAAGTA 153094 30 96.7 30 .............................A CATGAGTTAATGATGATGCAATTAGAGTTT 153154 30 96.7 30 .............................A AGCATGGATGTGTACTCAACGGGGCCAATC 153214 30 93.3 30 ............................TT AAAGACCTCATATGCATCGTTAGCGGTAGT 153274 30 96.7 30 ............................C. ATCAACATCACTTAAACGGGTACGCACTAA 153334 30 93.3 30 ............................CA TCTGCCGTAGTGCGCTTTACGGCGATCATC 153394 30 93.3 30 ............................TT GCCAACGTAGGTGAGCCATTTTTTGAAATG 153454 30 93.3 30 ............................GA ATAAGGAAATTGCCAAGTTTGCCTTAGGTT 153514 30 96.7 30 .............................C ACGAAAGCCGATGAAATTCCGAATAAGGAA 153574 30 93.3 31 ............................GT CTGATTACACTGATATGGCTGTTAAGTTCTT 153635 30 100.0 30 .............................. GACAAATATATTCACGAAAAACTCGGAGAC 153695 30 93.3 30 ............................GC CGGGATCGCGCCTCGTTGGCACATACGATA 153755 30 93.3 30 ............................CA CAGCACGTGTGATCTATAACAATGAATCAA 153815 30 93.3 30 ............................TA TTGCCTGACGAACATTAGATTGTAATTCCT 153875 30 93.3 30 ............................TT GATGAGCCTTGATGGATTTTGAATTATGGC 153935 30 96.7 30 .............................T ATTTTGACTTGTGGTGTTTTTTGATTAAAC 153995 30 96.7 30 .............................A AAGAAAGTGATGCACTTTCTTTACGTCAGT 154055 30 100.0 30 .............................. AAGAAATAGACCCTGCTCTGCAAGCTCTAT 154115 30 96.7 30 .............................C TGACGCTACCAATGGGTAAAACCTTGCACT 154175 30 96.7 30 .............................A ACTGAGCAAGGATGATTATGACGGTGCGTT 154235 30 96.7 30 ............................T. CCAGTTCCAAGTCGCTTTGAAAGATTCCCA 154295 30 93.3 30 ............................TT ACTGTAAATACAAACTCTTAACCTCATTAA 154355 30 96.7 30 ............................T. ATGGACAACGTAAGCCATTCGGGTTGTAGC 154415 30 93.3 31 ............................TA GCAACGGTCAGTGAGGCTTCAAAATCTAGTA 154476 30 93.3 30 ............................TA TATCAATGGTATTAACCTAAAGAAATACAT 154536 30 100.0 30 .............................. ACATCAACAGGCCGCAGATATGGTACTACT 154596 30 96.7 30 ............................G. ATAAATCCCGGTATTTTTGGAATTGTTTTG 154656 30 96.7 30 .............................A TGTGTTGCGCCACGGCCTGCCTGATATGGA 154716 30 93.3 30 ............................GT TCGACTGGAGAGATTTGCCCAATGGCTGTG 154776 30 100.0 30 .............................. ACCGAAGCAACCCGTTATTATCCTCGCACC 154836 30 100.0 30 .............................. TTCAACACAATGCCCACCGGGCAAAATTTG 154896 30 93.3 30 ............................TC ATCCAGTTAATCAAATCTGCCTTGATAAAT 154956 30 96.7 30 .............................A ACATAAGCGGTGCAACAATAACGCCAAACA 155016 30 96.7 30 .............................T AATTAAGTTGGATGCGACTGATTTTCCACG 155076 30 96.7 30 ............................T. ATGGACAACGTAAGCCATTCGGGTTGTAGC 155136 30 93.3 30 ............................GA TAAGAGTATCACTGGCAATGAAACGATTTA 155196 30 93.3 30 ............................GT TGTTGTCCGGCATGCTCTGGGCACACGTAT 155256 30 93.3 30 ............................TA CGCGAGGAACGCGCTCAAGTCCTGTCTGAT 155316 30 93.3 30 ............................CA TTGCTTGAGCGCTGTTTTGGTCTTGCTTAT 155376 30 96.7 30 .............................C GCAGCCTTTAAGCTTTTCTGATGCATGGTC 155436 30 96.7 30 .............................A TTAGATATAACACCGGCGAGTATAGCTATG 155496 30 96.7 30 ............................T. AGGGTGAACTCTATAACGAAGACCATGATC 155556 30 96.7 30 .............................T TTAGAACCGAAGCCGGGCTATCAGCTGTTT 155616 30 96.7 30 .............................T TACCTTTTTGTGAATATTTCATAGTTAAAT 155676 30 100.0 30 .............................. ACATTTCAGTCTGAGCCTGCGCGACTAAAT 155736 30 96.7 30 .............................T CAGAACCGGTAAAACGCTTTTTGTTCTCAA 155796 30 93.3 30 ............................GT TATCAATAAGTTTGTATTGACAGTAACCTG 155856 30 93.3 30 ............................TT TATGTAGTTCGAGAGCAGTAAGGAGAATCT 155916 30 93.3 30 ............................GC ACAGGCAAGACGCTCTATACAATGAAACTC 155976 30 96.7 30 ............................T. AGTAATCATGATACAAAACAGAATGAAAGC 156036 30 93.3 30 ............................TC TAGATAATCAAACTGTGGATTGGGTAGGAC 156096 30 93.3 30 ............................CT GCATTGTTTTTTTTAAACATAACTTTCAAA 156156 30 93.3 30 ............................GA AATTTCAGTAACATCTTCATTCTTTAAGTC 156216 30 90.0 30 ........T...................GT CCCCACATGCGCGCTCAGGATGATGCACGG 156276 30 90.0 30 .............G..............GC TCAGTTATTTAAACCTTATATAAAATCTGG 156336 30 80.0 21 .......A...TG.....T.........TT ACCTTAATATTACTGAGATTA Deletion [156387] 156387 30 90.0 29 .......A....................TA CGAGTGATTTAAGAGTGGAAAATAAAGCG 156446 30 76.7 0 A..G...AT........T..........TT | ========== ====== ====== ====== ============================== =============================== ================== 92 30 95.0 30 GTTCATGGCGGCATACGCCATTTAGAAAAG # Left flank : GGAAATGGCTGGAACGATTAGTGGATTATGTCCATGTTACTCAACCGCGAGATGTCCCTCATGCTAAGGTCACTGGATTTGCCAATTATTTTCGAGTGAATCCGAAGATGAATTTGGAGGAACGTATTGCTCATCAAGCGCAGCGTCGCAATATTTCTTTGAATCAAGCGAGGCAGCATTTTAAGGAATATATTGATCACCCCATCGTTGAGCCTTATGTAAGTTTAAAAAGTCTGAGTGCCAAGCGAGAGGAAAATATAGATCGGCCATATCGTTTATATATTGGTAAATCTGTTGCCGATGAGGCAAAAGAGGGAACATTTGGAACTTATGGGTTAAGCCGCTTCTCAACCATACCAGAGTTTTGACCCAATATTTTTTCTATTCTTTAACAGTTTAATAAAATCAATAAGTTACAATAAGTGGTTTTTTGATTGGGTAAAATGCCATAATTTATATTAACTACTTGTTGTAACTTATATTTTTACTATAATTTTATA # Right flank : TAACAATACCCCCATGCGCGGTCTTTACCTCATTACCAATGATGATCCAATCCAGCTGTTACTTGAAAAACTAGATGTCGCATTAGCAACTGGAAAAGTTGCGATTTTGCAATACCGCCGTAAAAAGGTAGCAAAGGCAGAGCAGCCAGTCGAAGTGGAGCAGATCAAGCAACTCTGTGAAAAGCATCAGGTGCCATTTGTGATTAATGATGATCTGGCCTTGGCAGAACAGTTTGGTTTAGGGGTTCATCTGGGACAGTCCGATGGTGAAATAAGTGATGCCGCGGCACGTTTACCACAAGGTGTCATTATTGGGCGGACTTGCCTCAACTCACTGGAGCTTGCTGAAAAGGCAATTGCCGATGGGGCGACTTATATCGCCTTTGGTGCAGTTTATGCCACCTCAACCAAACCTGAAGCGGGTAATGTCGGCATTGAAGTCATCAAGCAGGCTAAACAAAAATTTTCGGTGCCAATTTGTGCGATCGGGGGGCTGACCG # Questionable array : NO Score: 5.14 # Score Detail : 1:0, 2:3, 3:0, 4:0.75, 5:0, 6:0.25, 7:0.00, 8:1, 9:0.14, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGGCATACGCCATTTAGAAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched GTTCATGGCGGCATACGCCATTTAGAAATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.10,-6.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-12] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [85.0-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 58216-56208 **** Predicted by CRISPRDetect 2.4 *** >NZ_JSUS01000032.1 Acinetobacter sp. A47 contig_2, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 58215 28 100.0 32 ............................ AGTCGTCAGGACTTTCTAAAACATCATCAACA 58155 28 100.0 32 ............................ AGCATTAACAAATGGGTTTAACAGTTCTCGTA 58095 28 100.0 32 ............................ AACAGTGCTTAGAAGATCGTCGTTTTTATTCA 58035 28 100.0 32 ............................ CTTAAAAAGAATGGGTTAATCGAGAATGGGAG 57975 28 100.0 32 ............................ TACAGAAACCACCTGCTGGTAAAAAAGTTCTT 57915 28 100.0 32 ............................ TAAGCATCCCTATAAATTTGTTTTGGTGAAGA 57855 28 100.0 32 ............................ AATAATCCCTTCTGTGATAAAATCGTTAAAGT 57795 28 100.0 32 ............................ AGCCACTGTCTATCAAAACCAAATTGTTAGTC 57735 28 100.0 32 ............................ CGCGACATTCACAATCAAAGATCATTCAGACA 57675 28 100.0 32 ............................ AATGGCACCAGTAAGAAGTATGATCATTTTAT 57615 28 100.0 32 ............................ TTAGCTGAATCAACAGAGCTCTTAATCGCATC 57555 28 100.0 32 ............................ TTGTACAACGTATTCCTGTACGGATTGCCCTG 57495 28 100.0 32 ............................ TTGATAACTGGCTAGAGTCTGCCGCAATAAAC 57435 28 100.0 32 ............................ AGTATCCTCTGGCAGCTGCTCAACAATCGTAA 57375 28 100.0 32 ............................ AGTAAACCCATTCTTAAAACCAGCAAATAGGA 57315 28 100.0 32 ............................ AGCGATTTCCGACACGTCTTGATTTAAGATTT 57255 28 100.0 32 ............................ AATAAAAACACATGTAAATGAGAATCATTCTC 57195 28 100.0 32 ............................ TTGATAACTGGCTAGAGTCTGCCGCAATAAAC 57135 28 100.0 32 ............................ AGTATCCTCTGGCAGCTGCTCAACAATCGTAA 57075 28 100.0 32 ............................ AGTAAACCCATTCTTAAAACCAGCAAATAGGA 57015 28 100.0 32 ............................ TTCCGGTCTCATGCCAAGCCCTCCACATTTCC 56955 28 100.0 32 ............................ TTTCCCGTTCGGTCTACGCCAATTGCCTTTAT 56895 28 100.0 32 ............................ AAAATGCCGATGCAGTGTTAATGATCGACCAA 56835 28 100.0 32 ............................ CTCGCATTGTCATACCCTTTATAAAATAAAGC 56775 28 100.0 32 ............................ ATGAAATTGGGTGAGTTATATGCTCAGCGAGA 56715 28 100.0 32 ............................ TTTTTGAAGGGCAGCAAAAGCCTGATGGGCAT 56655 28 100.0 32 ............................ CCGCGCAAAAGCTTTCCAGTCCTTGTTTTTCA 56595 28 100.0 32 ............................ GTTATCGGAAGATCAGTATTACGGCTATGCTT 56535 28 100.0 32 ............................ AGTTGTTCCTGAACTCGGAACAGCAGTTAAGC 56475 28 100.0 32 ............................ TTCAAATAATTCAGTTGTTTCACTGGACAAAG 56415 28 100.0 32 ............................ AAACGAATAAAGCGGATTGGCTTTATCACCTA 56355 28 100.0 32 ............................ TACTGATCAAAAATAACACATTGGTATCTGGA 56295 28 100.0 32 ............................ TCATAAGCTAATTGAATTGCCAAAATCTTGTA 56235 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 34 28 100.0 32 GTTCATGACGGCATACGTCATTTAGAAA # Left flank : CTGTAAATGCAATTTGTCGTTGTAGATTACTGATCTCAATGGTGTCAGCATCAATAATGGTAATTTTCCCTACGCCCGCACGTGCCAGCAGTTCGGCACTGGTACAGCCGATTCCACCTGCACCGACGATCAGTACATTGGCAAGTTTCAGCCGTTCTTGTGCTTCGATATCCCAACCATCCAGTAAAATCTGGCGGCCATAGAGATGCATTTCCTCATTGCTTAGCTCAAATTCGTTTTCTAAATGGTCTGACACGTGGTTACTTCTTTATATTTAAGGTAGTGCTGATTCTAAGTCGAGGGAAGATCGGAGGAAAGTAATAAATTTTATTTCAAAGGATTTTATTTTGACAAAGCTCTATTTTTACCCCAATATTTTTATGACTCTTTAACAGCTTAATAAAATCAATAAGTTACTATATCGGTTAAAAACTTTGGGTATTTCTGCCTATTTAGATATAACTTGATGTTTTAACTTATATTATTTTCATTATTTTATA # Right flank : TCATAGCCATTAAATGCAGCCGACCCTACATCCTTCATGAGGGTATATGTTCTATAAATTAATGTTTTAACTGAAAATAAGATTTAAACTGAAAACCACGATGTATCAAAGCGTTTAGAGAAAGAGGAAATCTAATTCTGGCAGTTTGTAATACTTGAAGAACCCATGTTTTTTTGGCTAAAAACTCAAATAAGATCTTATCATCACATATTCTAAGACCAGTAAAGATATCAGTCTGATAAACCTGGCCTATCCATAATGACTCCAACAATCTATTTTTATCCAGATCGACTAACGCCAAAGTTAAAGTTTCCTCAAAAATACAATCATGGGTAAGGAAAAGAAGATAGCAGTGAGAATATACACATACCACACCCTCTAATACTTTTCCCTCAACCATAACCCCTGTCTTTTTTCCTTTAAGCATGACTTCAGACTGAGACACACACCTATCTGTCATCTCTGTGGTCAATGCTAAACTAATATAATCAGCTACATAC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGACGGCATACGTCATTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.71%AT] # Reference repeat match prediction: R [matched GTTCATGACGGCATACGTCATTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-4.50,-6.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [61.7-83.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.14 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //