Array 1 45115-47252 **** Predicted by CRISPRDetect 2.4 *** >NZ_VSUX01000007.1 Ligilactobacillus salivarius strain FNXYC6M7 Scaffold7, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ================================================================================== ================== 45115 36 100.0 31 .................................... TCAGTAAATGCTTGCAACTGTTTTTGTGTTC 45182 36 100.0 31 .................................... TCAGTACATGCTTGCAACTGTTTTTGTGCTC 45249 36 97.2 30 .................C.................. ACAATGTTTCGGACAGAAGTATTACACGTT 45315 36 100.0 30 .................................... ACAATGTTTCGGACAGAAGTATTACACGTT 45381 36 100.0 30 .................................... TAATACTAAGAAAGATAATACATGCAATAT 45447 36 100.0 30 .................................... ATACTAAGAAATATAAGTTCATTGATTACT 45513 36 100.0 30 .................................... GAGTTAATGGGCCTGTGAGCGACACCGCGA 45579 36 100.0 30 .................................... TATTTTGCAAATTTTTCTTTATAAAATTGT 45645 36 97.2 30 ..................................G. TACCTACAGCAATACCTGTAGTCCCATTAA 45711 36 97.2 31 .................T.................. GCAACACTATTAGAAGAAGAACTTTCTTCTT 45778 36 100.0 30 .................................... TACCTACAGCAATACCTGTAGCCCCATTAA 45844 36 97.2 30 .................................C.. TACCTACAGCAATACCTGTAGCCGCATTAA 45910 36 97.2 30 .................T.................. GTATGCAAATCTATAATGCTGCTTATTATA 45976 36 100.0 31 .................................... GCAACACTATTAGAAGAAGAACTTTCTTCTT 46043 36 100.0 30 .................................... GTATGCAAATCTATAATGCTGCTTATTATA 46109 36 100.0 30 .................................... GTATGCAACTCTATAATGCTGCTTATTATA 46175 36 94.4 30 .............A...............G...... TTAACCATCGCTAACATTGGTCGAGCTACT 46241 36 100.0 30 .................................... TTAACCATCGCTAACATTGGTCGAGCTACT 46307 36 100.0 30 .................................... AAACTGTTTTATTAACGCATTAATGAAGAA 46373 36 100.0 30 .................................... GAAATAAAAAAGCCCAGAGCATAAAGCCCT 46439 36 100.0 30 .................................... TATCACAGAAAGTTCTCCAGCAACATTATT 46505 36 100.0 30 .................................... CGATAAGATTGCAGAAATTACTAACTTGAT 46571 36 100.0 30 .................................... GAACCATTTACTTCATACGTGATGTTGGCG 46637 36 100.0 30 .................................... TATCTAATGTATTTTATGGATCACGTCAAA 46703 36 97.2 30 .................................C.. GAACCATTTACTTCAAACGTGATGTTGGCG 46769 36 97.2 30 ...........T........................ TATCTAATGTATTTTATGGATCACGTCAAA 46835 36 100.0 30 .................................... TTGCTGTCTTACACCTATGTCAATTCAACT 46901 36 100.0 30 .................................... AAGTTCACACGAAAAGCCCTATGACAATAC 46967 36 86.1 29 ..........T.........T...A......G.T.. ATCTGCGTTCAGTTGGTGTCTCAATGCTC C [47000] 47033 36 94.4 82 ........................A..A........ ACAACTGGAGTTTGAGTACGTTTAGCTTGTGTTTCAGAAGTATGTTAAAAACCTATTATATGTTATAATATGAAAGTGTTTA 47151 36 83.3 30 .....G....T.........T.........G.T..T AGTAATTCACCGCTAGTTAAGTGGTTTTTT 47217 36 80.6 0 ..........A.........T...AG...CG..G.. | ========== ====== ====== ====== ==================================== ================================================================================== ================== 32 36 97.5 32 GTTTCAGAAGGATGTTAAATCAATTAGGTTAAGACC # Left flank : AACAGACCGAATTAGTAAAAAGTATATGAATGTATTAATTAAGAAGATTATTGAAGACATCACAGACGATGAAAGACAAGCAATACTAAAATCAGTAAATAGTTTGTATGATCGTATTCGAGAGGTTTTGTATAAAATTGATATACCATTACAAGTAGATTATGACAATGATTTAACAAGACTATTTAAGTATTGTCAGGTACATACAGAGGCATTGCTATGGAAAAATGCGTATGATAGAATATCTTCAGATGTTAAATTGCATGTGGAACTAAATAGAGAAAGAATTATAGGTCTAACCAATGTCGCACATTATCTCACTAAAGAAGAGTTTCAGGAACTTGTAGGTCTTGTTAAGGCGACTAACTCATCAATGTTTATAATTGAATTCACAGAAAAGAATGGTCAGAGATTCTTTGAAAGCTGTGATAATTACTACATTGATGAGGATTATATTGATTGGTACTAACGAATCGTTAAATTTTGATTATAAAGTAACG # Right flank : CTAAAATACAAAAAATATTTCATAATATTTATAAATCTATCAGAAATTTTCTGGTAGATTTTTTTAGTGTAAAAATTTTTGAGTTTAAGATATATTATGGTTGATAATGTAATATTATATGATATATAATATAGTTGAAGATGAGATATAAAAGAAAGTGAGGGATGATGATGAAAATTCAAGTTAGTTCTGATTTACTAGATGGTTTAGTATTAGCGCTTTTAGATAAGCAAGATTATTATGGATACTCATTGACACAGGATATGCAAAGAGCAATTTCAATTTCAGAATCAACACTCTACCCAGTATTACGAAGGTTAAAGAATAATGGTTTATTAGAAACATATGATCAATCATATCAAGGGAGAAATCGTAGATATTATCGCATAACAAATAGTGGGGAAGAACATTTAGGAAGAGTTAAAAAAATGTGGAGCGACTACAAAGTTAGTTTAGATTCAATTTTCGAAAAAAACTAGGGAGGGGGAATAATAATGAAC # Questionable array : NO Score: 6.03 # Score Detail : 1:0, 2:3, 3:0, 4:0.88, 5:0, 6:0.25, 7:-0.10, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAGAAGGATGTTAAATCAATTAGGTTAAGACC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.70,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [3-23] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [73.3-85.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.27 Confidence: LOW] # Array family : NA //