Array 1 6864-7988 **** Predicted by CRISPRDetect 2.4 *** >NZ_WNCC01000023.1 Parasutterella excrementihominis strain BIOML-A11 scaffold23_size34492, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 6864 29 100.0 32 ............................. AAGGACGCTAAGCCTCAAACAAAACTCGACGC 6925 29 100.0 32 ............................. CCAAATCGGGCGGCTGATACACAGCTTGAAAT 6986 29 100.0 32 ............................. ACAAAGAGCATTTTGGGATAGTGCTCAGGCAT 7047 29 100.0 32 ............................. TCCATTACGGCAACCGCTGCTATCGGCGCCGG 7108 29 100.0 32 ............................. TAAACATCGAGGCTAGATTCTCCTGGAATCTG 7169 29 100.0 32 ............................. TCGATTTGGCTCCACTTGGCCTCTCTTGCCGT 7230 29 100.0 32 ............................. CTGAGACGGTTGACGGGTCAAAATCAACTCTA 7291 29 100.0 32 ............................. CGAGAACGAGGTTTTAAATGGTGCTCAATGAG 7352 29 100.0 33 ............................. CTCAATGAACAAAAAAATGAAATGAATTTCGGT 7414 29 100.0 32 ............................. ATCAACGGATCATTGATGAGGCCATCCGGAAA 7475 29 100.0 32 ............................. CTAACGATTTTGTCAGAAAATGAGCCTACTGC 7536 29 100.0 32 ............................. GAAAGGTACAACGAGATCTGCACATATCGAGA 7597 29 100.0 32 ............................. TATTGGAAGGCGCCCCAGGCATAGATTTAGAG 7658 29 96.6 32 ............C................ GCACAAGCCCGCACGAATATCGGAGCCGCCAA 7719 29 96.6 32 .................T........... GTCAGCAACGTAACCTAGACGATCTAAATCCT 7780 29 96.6 32 ............C................ TCCAACTGGACAATGGCCCACGACGGCTTAGA 7841 27 93.1 32 ...........--................ ACTGATTGATGTTGAAAATCCAACAGCTATGC 7900 29 79.3 33 ........T...C.....A..GC.G.... ATGGATTGGGTCATCGATCATCTCGATGTCAAA 7962 27 86.2 0 .........A.--...........G.... | ========== ====== ====== ====== ============================= ================================= ================== 19 29 97.3 32 GAGTTCCCCGCGTAAGCGGGGATGAACCG # Left flank : AGAAGAGTTTTTTCTCGTGTCTCACTGGTTCCTGGTTCAAGTCCAGTTGAGGCCACCACCTTCTTAATTCTATTTATGACAACGCCTCAGTCTTTTGAGAAGGAAAGGTTAAAAACGAATCATTAGAAGTTCTGATAGAATTGCACTTCTGCACAATGGTGATCTCTTCATCATTAGGCCCCATAGCTCAGTTGGTTAGAGCAGTCGACTCATAATCGATTGGTCACTGGTTCAAGTCCAGTTGGGGCCACCACCTCATCTATTAAATCCAATTAATTGAAGTCAGGATGGAACAGATTCTGAACCCCGGCCTTCTGTAAACGTTATTATCCTCTTTCAGGTCAGCAGAGCATTTGTCTTTGAAATTAAATGGCTCTGAAATTTTCTAATCCAGGGAACTGTTCTTGAAATGATTCAAAACAGTCTCAGGGTTCTTTGCATATTTTCCCGATAGGAAATCTTTGCTAGAGTTAGTAAGGTGCTCTATGCCTTGTTTAAGT # Right flank : GTGGATTCAGCAATAATTCAAGAAGACCTCCGCTTCTTTCCTCATTATGTTATTGGAGGGGTTGATCGAAAAAACAATTTCTTCTTTCCCTTTACTGCTGAGTTGTACACGTACATGGAAGTGAACCGTAATGATGGATTTTTCAACGGTTTAATTTCAAGTACTAGATGAACCGTAGTCACTTACTGTCTTAGATATTGTTGTTGGAAATCCTTCTGCGAAAAGAGTCGGAATTGATAGAAACTATCTTTCTATTCGTATTAATTCACTATCATCTCCAAAGCCTTTTAGGCTTCTCTTTCTAATTCGAAAAAGAAGGTTTTGCTCAAGAATTTAGTGCGCTAAAAGTATTAATAAAATCACAATATTGATTAAAGAACATACCTTCTATCAGCCAGATGGCTTTGAAGGATGAAAGCTCATCACCCATTGTGCCTATTCATGGTCGAGCACAATAAGCGCAAGTTCTAGAGTTGTAGAATGTTTCTTTTGGGATTTTT # Questionable array : NO Score: 6.12 # Score Detail : 1:0, 2:3, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GAGTTCCCCGCGTAAGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGTGAGCGGGGATGAACCG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-13] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 746-358 **** Predicted by CRISPRDetect 2.4 *** >NZ_WNCC01000024.1 Parasutterella excrementihominis strain BIOML-A11 scaffold24_size68512, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ====================================== ================== 745 33 88.9 34 .C....---........................... CGTTTTGTCTGCCGCATAGTTTGTGACATCGAAG 678 36 100.0 38 .................................... GTTACTGGTCATCTTTTCTTCATCGTCATCATCGAATG 604 36 100.0 34 .................................... GTGGCGACTATGCGTCAAGAATCAGCCGCGTTTT 534 36 100.0 34 .................................... CCCACGGAAGCCGCGCAGATGACGCCCAAGGAAG 464 36 100.0 35 .................................... CCCAACCGGAAAGGCCACAAGTCGTCTTCTTGAAT 393 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ====================================== ================== 6 36 98.1 35 GTTTCAGTTGTTATTGAAAGAATGTACGATTGAAGC # Left flank : AGGTTGAATTAGAAAGTTTGAATATATTTATTTCAGTGAGTCCACAAATACGAGTCCATTTTTCAAAAGAATGTGGGTCGAAACAGTTTGAATGCTTTGTAGCTGCATTTCTCGACTTCTGTTGAAAGAATACGCAATTAAAGAGGAAACTATTTTCCTGACTTTGACTATCTGCTAAAAATTAGGCTGAGTTTGGTCAGGGGCGGAATTTTCCCTTTTTTGGAATGACGGAACGATCCTCTCTTTGAACTGAGATTGGATCGAAAGAGTAAGAAGGAAAGAGGCGTAACAAAGGGAGAGGTGACTTATTGTGCGATTTTTTAAGGCATTGATAGACGGGTTGCTTAATGGCTTAGCCACTATTTTCTCGGTTGTTATGTTTTTATTGCTTCTGCTTTTAATTTCTTTTAGTTTCTACTTCGTGTTTTTGACTTGATGTCTTCGTTTACATGCAAGGGTGCTTCGACGCCCTTTTTGTGTGGATTCCGGCAATAGTATGT # Right flank : CTCCGAAACCAACTGATTGAAAATAAACGATTTTTGACAGTTGGTTTCTGGTCTGTTTTTCGAAAATGGTCGATCTGCACAAAAAGTGCCATTATTTTCGAAAATTTGGGGTGATTGCTTGACTGTTTTTGATAGTTGTGGCAATATCTAGTTACATTCTTTCAACAACGAAATCGCCTTAGGGCGAGCTGAAATCAATTTGATTAAATATTAGATCCGGCTACTGAGGCCTCTTGGCCTTATCCGGATTAACAAGGAGCCTCTATTCGAGGCTTTTTGTGTGTGCGCTCGGCATGAGCGAACTCTACAGGGTGAAAGTCCCGAAGTGCGGGCGGTGGCGCCAAGCACATAGCCAAAG # Questionable array : NO Score: 3.16 # Score Detail : 1:0, 2:0, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAGTTGTTATTGAAAGAATGTACGATTGAAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-3.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [65.0-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.68,4.87 Confidence: HIGH] # Array family : NA // Array 2 7720-8374 **** Predicted by CRISPRDetect 2.4 *** >NZ_WNCC01000024.1 Parasutterella excrementihominis strain BIOML-A11 scaffold24_size68512, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ======================================================================================= ================== 7720 36 100.0 35 .................................... GGAAGAACCTCATCCACAAAAAACGGGATGAGATA 7791 36 100.0 35 .................................... AAACTCCCCGGGCAGGTCGCTCGAAACGGCGGTTA 7862 36 100.0 35 .................................... CGCTAAATACACGCTCAACTCTGCTCAAATGCTGT 7933 36 97.2 36 ................T................... ACGAGATCGACCGAGCAACCGAGAACGAAGGAGTAA 8005 36 100.0 35 .................................... CATAGCACTCGAACGGGAACCCTTCCGTATGTGTG 8076 36 100.0 34 .................................... TCAGGGAGGCATACTTGATCAGAGCATCCGAGAC 8146 36 100.0 34 .................................... TACTCCCAACTGCTTACAGACAAGGCGCTCATGT 8216 36 100.0 87 .................................... GATACATTGAAGTTTCTAAAAGATCCGCCTGTCACGTTTCAATAACTATTGAAACTCCAGTCCTCGGCGTTGAACTCGAACTCTAAG 8339 36 83.3 0 .T..................C..GG.T.....G... | ========== ====== ====== ====== ==================================== ======================================================================================= ================== 9 36 97.8 42 GCTTCAATACTACATTCTTCTAACAACTACTGAAAC # Left flank : GAGAAATTCCAAAGAGAGGTAAAGCAAGGGTTCATTCTTTACGGCAAGAAAGGCAAGAGCCTGCGCGTTGAATTCACGGAAGAAAGAAAAAAGAAAGTGATAGAAATAGCTCAAAAGATTATTAGTAGTTTCGAAACAGGCCTTCTTCCAGACTCCCCCGCTACTTCAGCACAATGCGGGCAATGCGAATTTTTGAATTTTTGCGGGGACCGCTTCTAGCAACACAAAAAGCCTCCTCGGAGGCTCTTCGTTAATCCGGATAAGGTCAAAGACCTCAGTAGCCGGATCTAATATTTAATCAAATTGATTTCAGCTCGCCCGAAGGCGACTTCGTTGTTAAAAGAATGTAATTAAATATTGCCAGAAATATTCTAAATAGTCAAGCAATCACCCCAATTTTTCGAAAATAACGGCACTTTTCGTGCAGGTCGACCATTTTCGAAAAACAGCTCCGAAATCAACCTATCAAAATCCTTTGTTTTCAAATAATTGAGTCCGAG # Right flank : CTGTCTAGTGGCGTAGCCAGAATAATTTTCTAAAAAGTCTCCGAATCACATTCTTCTAACTGTCGCTGAGACCAAATATTCGGCGTCCAAGAGCGAGACAAACTTTCGTTTACACCCTACTCCACTTCGGTACAATCATCCACGTTGTAAACAAATGCCACTCTCGTCAAAAAGATAGTTGCCTAATCTTTGTCAGTTTGCGAAAAACTCGCTCTCGCCTTTCTGGAATAGTGGATGAGAAACGGATGCTTCGAGGGAACGGCAAGAAAAGCAACAGCGCCAAGAATCAATGCCCCGCCAATACACTCCCAAGAATTAACGCTCACCCCAAGAAATATCATGCTCAGTAGAGTTGCAGCTACTGGGTCGAAGGTCTCCATCATGCCGGCAATATCTGCCGGGATAATTTCGGCAGCCGCTTGAAAAAGCCAAAACGCCGCAATCGTTCCGAAAAGCACAATAAACGCATAAGCCAAAATTGAGTAGACGGTCCAGTCCAA # Questionable array : NO Score: 2.59 # Score Detail : 1:0, 2:0, 3:0, 4:0.89, 5:0, 6:0.25, 7:-0.55, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTTCAATACTACATTCTTCTAACAACTACTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA // Array 1 13738-13160 **** Predicted by CRISPRDetect 2.4 *** >NZ_WNCC01000043.1 Parasutterella excrementihominis strain BIOML-A11 scaffold43_size18713, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 13737 29 100.0 32 ............................. TATTTGCTTCCAGCGGGGACATTGGGCGTCCT 13676 29 100.0 32 ............................. ATCCTTATCCTTTTGTTTTAGTCCGGGCAAAT 13615 29 100.0 32 ............................. ACCGAGCCGATGATTAACCTCATCATCTCAGT 13554 29 100.0 32 ............................. GAAGATTGCATTAAACATAATGTCGAGAAGTA 13493 29 100.0 32 ............................. ATCACCACCATGAAAGGTAATCCCCTGCTAGT 13432 29 100.0 32 ............................. GTATCGTTGCCGAGACCGGCGCGTTTGAACAC 13371 29 100.0 32 ............................. ATTGAACCGGTCATTTTGTCCCGAGTCGATCC 13310 29 100.0 32 ............................. GCAAACATGGACGCACCTGAGATTGCACGTCT 13249 29 100.0 32 ............................. CGTAATGTATATACGTTCAACTGTTTATTCAG 13188 29 86.2 0 ............C...........GTT.. | ========== ====== ====== ====== ============================= ================================ ================== 10 29 98.6 32 GAGTTCCCCGCGTAAGCGGGGATGAACCG # Left flank : GATTCGAGGATCCGAAATTTTTCACTCGTGAGTACAAAGACTATTTTGGTTTGTCGCCTCGAGAAAATATAAAAAAGATAAGAGCAGAGGAGGGCATCAATTAATTTTTTAGTGGAAAAATCTAGCAGATTTCGAAGAAAGAATTTCTTGGCAGCTATGGGATTGGTTGGTGTGACGCAAATAGGTCTCAGAAAATTTGTGAGCATCCCAACTTTAAATAATTCTGATAGAATCCCTCCTTCCAACGGAAGGATGGCAGAGTGGTCGAATGCGCCGGACTCGAAATCCGGTATACGGTTATACCGTATCGAGGGTTCAAATCCCTCTCCTTCCGCCATTTTTCTACTTAATGCCCCGTTAACACATTTTCTCCTCTCTACGCAGGCTTCGGTATTTCAGAGAAAACTGATAGTATCTTTAGTAGCTTTGTTCTTGTTTAGAAATGTTCTTTAAAAGCTTAGCGGTAAGCCGATTAGTGTAATGTTGTAACCATTTTAAGT # Right flank : GACTTACCCTGCATGAAGGTAATGCTGGAGAGTTCTCCGCTCGAGGAAAATGATTGTCAGAAGCTTAGAAATTACCTAGCTTTTCCTGTTCTGAAGAGAGGGTAAGGTCTTAGATTTTTTCCTTTTTAATTTGAAGCGATTCAATTGAACTTTTCAAAAGGTAAGGTTTCCTTGTGTACATTCAATTAGCAAACTAAGTAATTCTACTTTGGTTTTGGTTGGATCGCTTCGTTGTAAAATCTCAAAATAAATCAAATTCAACCCCTTGACAGCGTCCTTTGTATATATTGGAAAGATTGTATTGTTTCCTCGAGGGTTCGAGCCATGGAAATGGACCTAACAACTAGAATTATCGCCATTGTTGTTCTCATTCTTTTCAGCGGTTATTTCTCTATGGCAGAGATTTCGCTAGCCGCATCTCCTAAAGTTAAATTGCATCAAGCATTAGATGCGGGGGATAAACGAGCACAAAAAGTGCTGGATCTTCAAGTTAAACCAGG # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GAGTTCCCCGCGTAAGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGTGAGCGGGGATGAACCG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [51.7-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //