Array 1 37683-37202 **** Predicted by CRISPRDetect 2.4 *** >NZ_JDFI01000038.1 Actinomyces sp. ICM54 contig00058, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= =============================== ================== 37682 33 100.0 31 ................................. CCTCGCGGGGACGGCCTGCCAGCAGGCGCCG 37618 33 100.0 31 ................................. CGATGACATTGCGGGAGAGTGCGGCTTTGCG 37554 33 100.0 31 ................................. CCCCTAGCCGCGGCCCTCGCCGAACTCACCG 37490 33 100.0 31 ................................. TGCGCTCTCGCGTCAGAACGAGGCGCGTGCA 37426 33 90.9 31 ..........C..........G..........T TTCGTGTCCGATGAAGCCACCGCGCAATCCA 37362 33 97.0 31 .....................G........... TTCGCGACGTTGGTCGTGATGGCCTGCAGCA 37298 33 100.0 31 ................................. CTCCCATACGTCTGGGGTGGCTCAGCAATCA 37234 33 84.8 0 ..................A...T...T.TA... | ========== ====== ====== ====== ================================= =============================== ================== 8 33 96.6 31 AGTATATCAAGGGGATAGGTGACTGAATCCCAG # Left flank : ATTGCAGC # Right flank : TGGTTTCTCGCGTGAGCGGAATGAGCTCCGATCCGGAATCGCGCAATTTAATTGAGCATACAAAATGCTCCTGAACATCGTTCAGGAGCAAATGATAGCGAGAGGACATCTTGGTACATGGGGTCTTTACAGCCTGAAGCTGAAGGCAGTCCCGCACCCGAAGCTGCTGGAGCAGCTTCCTTTGAACGCTCTGTTACCAGACGTCCTACCGTATCCTCTCGCTGCGTCGATACTAGTCTCAAGGTTGGTTTCGGTCAAGAAAGACATGTAAACAACGCTCTCCTGCTGACACTGGTTGATCATAGTTTTCCCCTGAGCGCGGGGATGAGCCTTTGAGCTATATGAAGTGAGGACATCCCAGCTGCCCGAAGGGGCTGCCTAATGTCCTCACCGCTAGGGTACCGCACTCATGGAATGCGGACAATATTTCCTGCGTGGTTTTCCCCGCGTGAGCGGGGATTAGCCTGCTGTGAGGTCGGTTCTTGCCAAGTCGTTGCATG # Questionable array : NO Score: 3.09 # Score Detail : 1:0, 2:0, 3:0, 4:0.83, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : AGTATATCAAGGGGATAGGTGACTGAATCCCAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:54.55%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [50.0-8.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.41 Confidence: LOW] # Array family : NA // Array 1 1194-6 **** Predicted by CRISPRDetect 2.4 *** >NZ_JDFI01000070.1 Actinomyces sp. ICM54 contig00059, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================ ================== 1193 36 100.0 28 .................................... GCCCCGAGGCTGTGGCGCGTATGAACGC 1129 36 100.0 28 .................................... GGGATGCCAAACATGCGTCCGACCGAGA 1065 36 100.0 28 .................................... GACGCCGAGCGCGCCGAATTCATCGCCG 1001 36 100.0 28 .................................... TGAGGATCGTGATGAGGACCGACAGGAT 937 36 100.0 28 .................................... ATCCAGGTAAAGCCGTCGGCCGTGATGT 873 36 100.0 28 .................................... AGGGGGTGGAAGCATGAGTGTCCATCGT 809 36 100.0 28 .................................... CTAGACGACCTCGCCGGCCACGATGACA 745 36 100.0 28 .................................... GTGCTCGGCCTCGAGTGGAACGCCCCCG 681 36 100.0 28 .................................... ACTGGGCACGTTCACCGCCCGCGTTGCG 617 36 100.0 28 .................................... GGACGGGCACGAGGGCGGAAACGACGGC 553 36 100.0 28 .................................... ATCGAAAACGCAGTAAAAGACGCCTTCG 489 36 100.0 28 .................................... GCAGGCCGGTGAGGAAGGCTTCCGCGTC 425 36 100.0 28 .................................... GGATCGTGGTGGGAAGTGATCGGCGATC 361 36 97.2 28 ...................................T GAAAACCCACGTCTTCCCGCTCTGAGAA 297 36 97.2 28 ...........G........................ AGGTCGATCAGGGTGCCGATCTCGTCGA 233 36 97.2 28 .G.................................. GCGAGACCTTCCGAACGAGCGAAGCCAC 169 36 97.2 28 .G.................................. AGCATCATCGGCTGGCTCGGAAGCGGGC 105 36 97.2 28 .G.................................. CTAAAGCTCGCAGCCGCACTCATTGCAG 41 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================ ================== 19 36 99.3 28 CAAGTATATCAAGGGGATAGGTGACTGAATCCCAGC # Left flank : CGACTCGTGCGGTCACGTGTGGGTGA # Right flank : CCTCGC # Questionable array : NO Score: 3.22 # Score Detail : 1:0, 2:0, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CAAGTATATCAAGGGGATAGGTGACTGAATCCCAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:52.78%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.20,-0.80] Score: 0/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [1.7-15.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.68 Confidence: HIGH] # Array family : NA //