Array 1 15349-15106 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_AOSG01000002.1 Thermobifida fusca TM51 contig002, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence              	Spacer_Sequence                                                	Insertion/Deletion
==========	======	======	======	=============================	===============================================================	==================
     15348	    29	 100.0	    32	.............................	CCCTCCCGTCAATGGGGCGGTCGCCAACCCAT                               	
     15287	    29	  96.6	    32	............................G	AGATCATCGCTCGGCTCTGGCAGGGGGTTCCG                               	
     15226	    29	  93.1	    63	..............T.............C	CACTTGTCGGCGCTTCTGGTTGACGAGCTCACCGAGGCGCTGCGCCGCACTCCGGCTGCGGTG	
     15134	    29	  75.9	     0	...G..G..A......ATC.......G..	|                                                              	
==========	======	======	======	=============================	===============================================================	==================
         4	    29	  91.4	    43	GTGCTCCCCGCGCACGCGGGGATGATCCT	                                                               	       

# Left flank :   CCCCCTGCCACCGGCAGATGTGCAAGTACCCCGGAGTGTCCGCTAGACTGTCATCAGTGTTTCGGGGTGTGGCGCAGCTTGGCAGCGCGCTTCGTTCGGGACGAAGAGGTCGTGGGTTCAAATCCCGCCACCCCGACCACAGCGACACTGTCGCATAAGCAGAGGTCAAAGAGGGTGGCCCCAGGGGATCCGGATTCCTGGGGCCACCTTCTTTGCTGTGTGTCCGTGCGTCACACGTGCGTCAAAGGTCTCTGGTCGCATCCCTGCGACACTTCGCACCGTGGCCCCTTGAGGCATGGACTGCACCAGCATGCTGACTACCGCGGACTGCCCGTCCCATGCCTCGCAGGGACGTCTGCCTGCCGAACGTAGACGGGCAGCGGTAGCCGCCCACGGCGGCGCTCCCCGGACGGGCACCCCACCCCACAATCCCTCCTGTACGATTTTGAAAAGTGAATGAAATCAGCGCCGCGCGTTAGTAAAGTCGCAGGTCGTCTAGT
# Right flank :  CTCCGACTGTGCGTCCTGGCCGTCCGTGGACCTTACAGGGTCTCGGGTCTCTGGTCGGTGAGTGTGCCGCTCCTCGCCCTGTCCACTGGGGTGCGGAGCGGCACACCGAGAAAACACGTCGGAGCCCGCTTCCGTGGGCGTGCCGCGTTCGGGGTTTTCTGGTTCAGCGGGGAACTGCTCGTGTGAAGCGGGGGCGCTTCTGCACGGAGCGCAGTTTGATGAGAGGAACAGCGCCGGTCGGGTGCTGCTGTGGTCTGACCGGCGCTGTTGCCGAGGCTGAGTCACGGAGCGTGTGGGGGCCGCTCCGGGACCTGGGGCTGCTGTCGGCTGGCTGTTATCCCGCGGAGGTGCCCGCTGTCAGCCGCTGCTGTGTGCCGCTGGAACGGCGGAGGATGAAGTGGTCGAGCGCCCAGGCTCCGGGTCCGAGGATGGCGATGAGGAAGAAAGCCCAGCAGTACATGGCGGCGAGTTCTCCCCCGTTGTTGAGGGGCAGGAGCGCG

# Questionable array : NO	 Score: 2.87
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.57, 5:-1.5, 6:0.25, 7:-0.74, 8:0.6, 9:0.69,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTGCTCCCCGCGCACGCGGGGATGATCCT
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     F [4,3] Score: 0.37/0.37
# 	Reference repeat match prediction:         R [matched GTGCTCCCCGCGCACGCGGGGATGATCCC with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [-12.10,-12.70] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [8-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: R [35.0-53.3]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0.37,5.55   Confidence: HIGH] 

# Array family : I-E [Matched known repeat from this family],   
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