Array 1 54773-54412 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABKTI010000002.1 Oceanobacillus jeddahense isolate MGYG-HGUT-01472, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ================================== ================== 54772 32 100.0 34 ................................ CCACTCTGGAAGAAGCCAAAGCTGCTCGCCTTGA 54706 32 100.0 33 ................................ ATTTTTCGTCTGTTCACCATTGGAAGAATTTTG 54641 32 100.0 34 ................................ TCACCCAAGTGCTATAAGGAACCCACTCTCTATA 54575 32 100.0 34 ................................ CTATTGACCAGGAACGTGATGCTTTCGGACATCG 54509 32 93.8 34 ..................T...A......... GCATCTACTGGTTCAGTAACTCCCGCCATCACAG 54443 31 78.1 0 ...............-..TAA.AA.C...... | C [54433] ========== ====== ====== ====== ================================ ================================== ================== 6 32 95.3 34 TTCGCATCTTATATGGATGCGTGGATTGAAAT # Left flank : CTCACCTTATGTAGGTGAGTGGATTGAAATAGAAAGGCCAGCAAACACTTTAAATTTCTTGCGATTCTCACCTTATGTAGGTGAGTGGATTGAAATCGGATACCGGGGCGCATTCCAGCATACAAGTTTCTTCTCACCTTGTGTAGGTGAGTGGATTGAAATCTAACCGTTTGTCTCTGACGTGGCGGTCTGTGCTTTCTCACCTTGTGTAGGTGAGTGGATTGAAATCTTATGGAATGAATAAAGTATTATCAAAAAGGTGGATGCCTATCTTATTTAGGTACGTAAGATGTAACCATTCTTGTTAAAGGAAGTTTTGGACAAACAGGATATGGTGCTAACCTTAGGCAAACATAAGTTACTAAGTAGGTTAGCACTTCAATAAATACAAGGATTTAAAGAGCGTAAGTACAGAAAGCAACCAAATTTTATTATTTGAAAAAAGGTCAGCACTTTTAAGCAGCTGATCCTTTGATGTATTAGTTCTTTCTTTGTACGCT # Right flank : ATTAATATTGCAAATGGAAATGGAGTGTTAAATTTCAGCAAAAAAAGAAACACAAATAAGAGGGGCTCCATCCCAACTCCTCTTTCTAAAAACTCCTTCATCACAACCCCTTACCAATAATAAAAGGAGCTGGCCCATGACAAAAATAATTTGGCTTAACGGTGCTTTTGGTGCAGGAAAAACGCAAACAGCCTATGAACTTCATAGAAGATTGGAAAACTCCTTTGTATATGATCCGGAAAACATTGGTTTCTTTTTAGATCAGAATTTGCCTGATAAGTTAAAAAAGAAGGACTTTCAAGATTACGAAATATGGAGAGAATTTAATTATAAAACCCTAAAATATATCGCGGAAAACGATCAAACTCCAATCATCGTTCCAATGACAATTACGGATACATCTTATTTTAAAGAAATTACCGGTAAACTCGAATCGGAAGAAATCCAATTACATAAATTTGTCTTATCCGCTTCCAAAGAAGTAATCGAACGTAGGCTAA # Questionable array : NO Score: 9.02 # Score Detail : 1:0, 2:3, 3:3, 4:0.76, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TTCGCATCTTATATGGATGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:62.50%AT] # Reference repeat match prediction: R [matched TTCGCATCTTATATGGATGCGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [0.00,-1.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [10-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,9.78 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 55671-55045 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABKTI010000002.1 Oceanobacillus jeddahense isolate MGYG-HGUT-01472, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 55670 32 100.0 34 ................................ ATATATCTTAAACTGTTTACGATACGGAACTGCA 55604 32 100.0 35 ................................ CATTCTGGATAAAATACGCTGTGCATTTCGATCTC 55537 32 100.0 33 ................................ TCCGAGCTAAACGTCAGCTCAAACGCCTATATC 55472 32 100.0 34 ................................ TCCCAATGAAACCACCTCATAATTTACTTAATTT 55406 32 100.0 33 ................................ CGGCGCATCTGCATATGAGATGGAACAATTGGA 55341 32 100.0 35 ................................ TATTGACATCTAATTCATCCATCAAACTGGCGAAT 55274 32 96.9 34 ..........A..................... AGAAAGGCCAGCAAACACTTTAAATTTCTTGCGA 55208 32 96.9 34 ..........A..................... CGGATACCGGGGCGCATTCCAGCATACAAGTTTC 55142 32 100.0 34 ................................ CTAACCGTTTGTCTCTGACGTGGCGGTCTGTGCT 55076 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ =================================== ================== 10 32 99.4 34 TTCTCACCTTGTGTAGGTGAGTGGATTGAAAT # Left flank : CGCTTTAGATTATAGATTCCTTTTTTCTGTTCCTACTCCTCTCCACTTTTATTTGCTCTTGTCAAACGGACTTTTTCATTTGGAAAACAAGAACTTTCTATATTTTATCGGAAAGTAGCTTTTCCGGTCAACCTTTTTCTTCCTTTCCGATAAGATAGTTTATGAAATCCTTCTAAAATGTTGCAAAATCTACACAAATGACTGCGTTAATGCAAGTTAGTAAGTTCTTAGACTTAGATAAGAGAATATTTGAAGAAGGATCAAGCATGGTGGTATAATAAAGGAAATATTATGAAAGTTTTCGATAAAGTTTTTAGCTGGATAGATGAATTAGTGCTAACCCTAGGCGAACATAAATTACTAAGGAGGTTAGCACCTCAATGTACCAAAGATTTTTGAAGGTTTTATTGAGAATAATGATTCTTTATTTTTAATTTAATAAAAGGCTAGCACTTTTTATTATTTGAGGGTTTGATGTGTAACATTTTATATTAGTCGCT # Right flank : CTTATGGAATGAATAAAGTATTATCAAAAAGGTGGATGCCTATCTTATTTAGGTACGTAAGATGTAACCATTCTTGTTAAAGGAAGTTTTGGACAAACAGGATATGGTGCTAACCTTAGGCAAACATAAGTTACTAAGTAGGTTAGCACTTCAATAAATACAAGGATTTAAAGAGCGTAAGTACAGAAAGCAACCAAATTTTATTATTTGAAAAAAGGTCAGCACTTTTAAGCAGCTGATCCTTTGATGTATTAGTTCTTTCTTTGTACGCTTTCGCATCTTATATGGATGCGTGGATTGAAATCCACTCTGGAAGAAGCCAAAGCTGCTCGCCTTGATTCGCATCTTATATGGATGCGTGGATTGAAATATTTTTCGTCTGTTCACCATTGGAAGAATTTTGTTCGCATCTTATATGGATGCGTGGATTGAAATTCACCCAAGTGCTATAAGGAACCCACTCTCTATATTCGCATCTTATATGGATGCGTGGATTGAAA # Questionable array : NO Score: 9.23 # Score Detail : 1:0, 2:3, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TTCTCACCTTGTGTAGGTGAGTGGATTGAAAT # Alternate repeat : TTCTCACCTTATGTAGGTGAGTGGATTGAAAT # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:59.38%AT] # Reference repeat match prediction: R [matched TTCTCACCTTGTGTAGGTGAGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.50,-3.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [70.0-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 3 353806-352647 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABKTI010000002.1 Oceanobacillus jeddahense isolate MGYG-HGUT-01472, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 353805 32 100.0 34 ................................ CGTTTGGGTAGGCCGCCCTTAATGCAGGTAACGT 353739 32 100.0 35 ................................ AACCTCTGCACCCTCTGCAGCTGCTTCGGGGTTAG 353672 32 100.0 35 ................................ CGGGCGATTACGTGAAGTATGAGTATGTATATGAC 353605 32 100.0 33 ................................ CGAGTGAGACAGATAAAGAAGACTACGAAATGT 353540 32 100.0 33 ................................ TTTCCATCGCACCCTTTAAAAATCCAATCATGT 353475 32 100.0 34 ................................ TCCGCCTTTTATTATAGTTATCACTGATTCGACA 353409 32 100.0 34 ................................ GATATGATGCAAGTTAAGTCATATTTCTATAAGC 353343 32 100.0 36 ................................ TAGTAACACTTGGGCGTCCGGCGTTTCTGCCCTGGC 353275 32 100.0 34 ................................ CTTTATGGCTACTTGTTGATTCAGAAAAATACTA 353209 32 100.0 34 ................................ CACTGATTGGAGAACTACGTACATTCTTCGTGCT 353143 32 100.0 36 ................................ CGTTAATAGCGATGGTACTAGCGTGCGAAAGAGGGA 353075 32 100.0 35 ................................ TATTTGGTTAAATGGCATATCATAAACGAATGTAT 353008 32 100.0 34 ................................ AGATAACGTATCAAGGTTTGCAGCACCAGTCGTT 352942 32 100.0 34 ................................ AAATGCTGCCGGCGCTGATAGAGTCTGGGATTCA 352876 32 100.0 34 ................................ TCCAACTTGTTCACTGATAAATACTGTGTTGCCT 352810 32 100.0 34 ................................ CTTGATATTTCTTGCTGTTTTTCAAATTCTTGTA 352744 32 100.0 34 ................................ AATACATTAAAACGCCATGACACAGTGCGAAAAG 352678 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ==================================== ================== 18 32 100.0 34 TTCGCACTCTATATGAGTGCGTGGATTGAAAT # Left flank : TTTTGCAGATGGGCAAGAGGCAATTCATTCGGGCAATCTTGTCATAGATGGTCAAGTTGTAGAAGACTTATATGAGGGGCCAGAAGGGAAAATTAGTCCCGGAGAAACGATAGAAGGAACAGTATATCTCGAAGTAATTGATGAGAATATGGAGGAGGTCGAGTTACTCTACCTAAATCCGACATTGCTCACTTTCCCGGATTATGCCATGCGTATCAATTATAATTAGGAGGATGAAGCATAACTTGTTTGTGTAAAGCATCCTGTTTTTCTTTATAAATAGAATAGGATAAAATAGCAGTAACACGTATGATAAGCCTAGATGAATATTTAGTGCTAACCTCAAGCACACATCAATTACTAAGGAGGTTAGCACTTCCTTTACAGCAAGAGGTTTAGCGAAATATCCTAAGAATAAAAGGAAATAATTTTAACTTTTGATGCGGTTAGCACTTTTTCGTTTTTTAAACCTTGTTGTATTAGGGTGTATGATTTGTGCT # Right flank : GGTTAATTACCAACCTACACGGATCCTAAAACTAACATTATCAATACGAAAAAAAACGAGGAGTCATAATTGATACCTCGTTTTTCGTATTTGTGTCCCTCCTAACCTTTTTTCTTCACAGCAATCCAAATCTCACTATAGACTTGATCAAGATTGCTATAATCTTCTACAAAAGAAATTTCAGGTGCCTCCACCAACTCATAATCCGAAGAAGGAAGCCATTCTGCTGCTATTTTCGCCCATGTTTCCTGCATTGTTTGAGGGAATGGCCCTTGAGATGAAAACACAGCCCAAGTATGATCAGGCACCTCTATCACATCCAGCCCTTTAAAAGGCCCTTCTTCATCTGTCAATACGCCAATCATATGCTCCAAATAGCCTTCTTCTTCCATTCTTCCATCATCAAAGTTATAGGAAGCATTAATTACCTTCGTTGGATCTACATTAGCGTGTTGGTGCATCTTTTCTTTTTGAGACTCGGTAATACTTTGCGCCAATTT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TTCGCACTCTATATGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:59.38%AT] # Reference repeat match prediction: R [matched GTCGCACTCTACATGAGTGCGTGGATTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.60,-3.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [66.7-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 1042164-1040879 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABKTI010000001.1 Oceanobacillus jeddahense isolate MGYG-HGUT-01472, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 1042163 32 100.0 35 ................................ ATGCCTGTTCCGGCATAATGTCCTCCTAAACTACT 1042096 32 100.0 35 ................................ TCTCCGTCCTTAGCATGGCTAATTAATTCAGATAC 1042029 32 100.0 32 ................................ AGTTATAACGAAGAAGATATCGTTATCGATTT 1041965 32 100.0 34 ................................ CTAAGTTGGAACGTCCGCTGATGCCCTCATAGCC 1041899 32 100.0 35 ................................ TTTACTATATTTAAATTCATTAATTTCTATTTTGG 1041832 32 100.0 34 ................................ TTTTGCAATACTTCTTTTTGTTGCTTGCCTTTCC 1041766 32 100.0 35 ................................ ACCTCTAATTTATAGTCGCTGTCTTCCTCGTTTTC 1041699 32 100.0 35 ................................ TTCGGTAAAAGGCAGAACGTCGTAACCCATCAGTT 1041632 32 100.0 33 ................................ CTCTTCAAATGCATCTGAAATTCTGATTCCATT 1041567 32 100.0 34 ................................ CGAGGCTATTGCTTGATAAAGGTCGTATCCTTTA 1041501 32 100.0 33 ................................ TATGATTGTTCCATGCGCAGGAAAGACGATATC 1041436 32 96.9 34 ......................A......... AGAGACGATATTATCTCCATTACCAGATTGATAG 1041370 32 100.0 33 ................................ AAATGGTATTGGAAACAAAATTAAAGATATTGC 1041305 32 100.0 34 ................................ TGATTTAAAGACCACCAGAGACATACACCAACGG 1041239 32 100.0 34 ................................ TTTCCATCGCACCCTTTAAAAATCCAATCATGTT 1041173 32 100.0 34 ................................ TTGATGACTGTCAACTCTTTCCCTGTCTGAATCT 1041107 32 100.0 33 ................................ AGTGACCAAGATTGCACAAATCTATCGGATTAT 1041042 32 100.0 34 ................................ ATCAATATTATCGACATCAGCAAACACGCCTTCT 1040976 32 100.0 34 ................................ CTTGTTTCAGTGACATGAGAATAAATCAAAGTTG 1040910 32 81.2 0 ........................GAGACT.. | ========== ====== ====== ====== ================================ =================================== ================== 20 32 98.9 34 TTCGCACTCTATATGAGTGCGTGGATTGAAAT # Left flank : CCTTTTTTATGGAAGTAGGTGAGGCATGTTAATTATAGTTACTTATGACGTAAGCACTTCTAGTTCTGGTGGGCAAAAACGGCTTCGAAAAGTTGCAAAAATTTGTCAAAATCATGGACAACGTGTGCAAAATTCTGTATTTGAGTGTATTGTTAATACAACACAATATACTATTTTAAAAAATGAAATACTTAGTATAATGGATACTGAGAAGGATAGTATAAGATTTTATCGTTTAAGTGATAATCATCATTCTAAAGTAGAACATTTCGGTGTTAAAGAATCTTTAGATTTAGAAGGCCCTTTGATCTTCTAAATACATTATTTGAGCAGGTGCTAACCTAAAGCGAACATAAATTACTAGGGAGGTTAGCACTTATTGTTTTTAAAGGGATTATACCAATTCAGTCTAAAATTTTGCCAACTTATAAGTATTAAATTTTAGGTTAGCACTTTTGTAACTATAAACCCTTATTGGATACGTGCGTACACTGTGCGCT # Right flank : TTTATTATCACAATCATGAGCTTTGATTAATAAGCTTTCTTTCAATTGATCTATCTAACAGAGTAAAGTTATTACGAATATACAAAAACTGATTGTTCAAGAAAAGTTGATAGTTATTTTATAGTATTGGAGACTATAAAATATATTTGTTATACTTCAGAACAAAATTACCTATACTTACTAAACAAGAGCCTTTATCTGATAAAGGCTCTTCATATATATCATTTTATTGTAATAATTATAATTTTTTAATATAAAAGGTTGGTCTATCTTTACGTACAATTGATAATAATCACGCTACCTTTTTCCTTGTAGTAGATACTTTCAGATACGGATATACGATTCCAAAGAGAACAATAAATACCCCTATCCATTGAATAAAATTGACCACCTCATGCAGCACAATTATTGACATAAGAATAGCCATTGGTAGTTCAGAAGCACTTAAAATCGTGCCTAATCCACTTCCTATTTTAGGCATAGAAATACTAAATAATAAA # Questionable array : NO Score: 9.21 # Score Detail : 1:0, 2:3, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TTCGCACTCTATATGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:59.38%AT] # Reference repeat match prediction: R [matched GTCGCACTCTACATGAGTGCGTGGATTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.60,-3.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-60.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,9.78 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //