Array 1 374307-373483 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_CP024735.1 Prevotella intermedia strain KCOM 1944 chromosome 2, complete sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence               	Insertion/Deletion
==========	======	======	======	====================================	==============================	==================
    374306	    36	  94.4	    30	.......G.G..........................	TTAACACGTATCTATTCAATGTTAGTGTTG	
    374240	    36	 100.0	    29	....................................	GGGTTGTTTACTAAAACACCCAAAAAAAG 	
    374175	    36	 100.0	    30	....................................	GTGTGGTGCATAATCCATATAGCTATAACC	
    374109	    36	 100.0	    30	....................................	TTATGGTATGGCAGGAATTACACCTCGACG	
    374043	    36	 100.0	    29	....................................	TTCGGATAATAGAAGAATGGCTAGATGAA 	
    373978	    36	 100.0	    30	....................................	GTAAAGACTGCGAATATTGCAAACCAGTCA	
    373912	    36	 100.0	    30	....................................	TATATTTCGCTAAGCATTTTAATACAAAGG	
    373846	    36	  91.7	    30	..............T.......A.A...........	CATACGGGCTAAATTAATAAAAGCCCCCAT	
    373780	    36	  91.7	    29	..............T.......A.A...........	CTGAACAAGTAAGCCATATTGACTATATA 	
    373715	    36	  91.7	    30	..............T.......A.A...........	ACAATACATTCTGAGATGAAAAGAAAGGGG	
    373649	    36	  97.2	    29	..............T.....................	GATATAGATGTGATGCTGATTATGAACGT 	
    373584	    36	  97.2	    30	..............T.....................	GAAAACGTAGACGCAAACACAATTGACCTC	
    373518	    36	  91.7	     0	......C.......T..................C..	|                             	
==========	======	======	======	====================================	==============================	==================
        13	    36	  96.6	    30	GTTGTTTTTACCTTGCAAACAGCAGGCAGATGCAAC	                              	       

# Left flank :   GATAACGATATGAGAAAACATCTTATCTTGCTCTGTACAGCGGCTTTCCTGTCGTCGTTGCACATCAACCGAAGCTAACACAACCGAACGAGCCGCCGCATCGAGCCGATGCAGAAGCCCCAACCACCCTTGCCAATGTCGCACTATCGGCAAAGCCGCCCTTGTGCTGCCGCCCGAACCCACGCCACAACCTCTACACTTTCCACGACGTAAAACCACTCCTGTTTTGTAAAGATAATTCCATAGAAAAACCATAATTTCGATTTTACATTCCAAAAGCGGCTCTTTTGCAACGCAAAAGAGCCGCTTTTACCGTGTAAAACCTACGCTTTCGCAATGCAAAACAATAGGTTTTACAATGCGCTGATAACGAGATAGTTACGCAATAGTTTCGCTTGTGAAAAATATTTACACCTTTCTCGCCTTTTTTCACCCATAGAAAGGCGTGTTCCCCCTTCCATTTTTACTTCCCCCAATTCCATTCCCTTGCTTGTTAATAA
# Right flank :  GCACCTAACCTAACTATCTGATTCTTATATGTTTTGTTCCTTTCTTTCCACCACCCATTTTACGCATTCTAACTATCGAATTGTAAATCTCGTTGTTTTAAATTTATATCTTTTCTGATTTGTATTGAGAGGCTCTGATGAATTTCTATCATTCTCTTTGCAAGCTTCTCATTCTTTATTTCTATCGTTTCGTCGGGCTTGTCCTTCGCAGTAAGCAACAGTCCATATACAAGACTTCTATATTCGAATATTAGTGGCATTACCTTTTTTGATAGAAATATGCCATTGCCCTTGTTGTATATCTCTTCGGTTAGCTCTTTTATAAACTTACGTATATTGGCTTGTCTGAAGTAATAAGTTTTCTCTCCACCGCCCTTAGGCTGCTCCCACACCAATATGCAGTCGTCGTTTTCCGTATCTGTAATAAACCTAAGCAATTTATAAATGCTTTGGTGCGCCTTCAGTACGGCTTCATACTTTGCACGCTCAATATTCTCAAA

# Questionable array : NO	 Score: 2.86
# 	Score Detail : 1:0, 2:0, 3:0, 4:0.83, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.77,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTGTTTTTACCTTGCAAACAGCAGGCAGATGCAAC
# Alternate repeat :   GTTGTTTTTACCTTTCAAACAGAAAGCAGATGCAAC

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:55.56%AT]
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  F [-7.50,-4.70] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [3-2] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [63.3-56.7]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0.37,0.41   Confidence: LOW] 

# Array family : NA
//