Array 1 1099163-1088863 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP025197.1 Acetivibrio saccincola strain GGR1 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================== ================== 1099162 30 100.0 35 .............................. GCAATTTTGGTTTTCACTTTAGTACCTGTAGAAGG 1099097 30 100.0 36 .............................. ATCCTCTAAGAAAAAATTAATATCTACATTGTAAAA 1099031 30 100.0 36 .............................. ATTTGAAATATACGACTGTTATTGAGTTTCAGAAGA 1098965 30 100.0 37 .............................. TTTGCTTTTGTAATCCCAATCCTAATCCTAAAGATGG 1098898 30 100.0 37 .............................. TTGGCATTACTATTGTGTAATAGTCAATATCTTCTAT 1098831 30 100.0 37 .............................. ATAATCCTCATAATAACCTCCTTTTACGGCGGTTTTT 1098764 30 100.0 37 .............................. GAAATAACCTCTAAAACAACAGGCATATAATACTTTA 1098697 30 100.0 37 .............................. ATAAAAAACCATAATGGCCTCAACATGATGTATACTA 1098630 30 100.0 36 .............................. GTGCCACACCTATCATTATGGCCATTATTCCTATTC 1098564 30 100.0 37 .............................. ATATAAATTAAAAGGAGGAATTAAAATGTTTAGAAAA 1098497 30 100.0 39 .............................. TTCCCATATCATTTTCCAAGTTTTTTGATATGTATTTTG 1098428 30 100.0 37 .............................. AAGCAAAAAAATAAAGCCTTTTTCAAGGCTTATAATA 1098361 30 100.0 38 .............................. TCGTATAAATTTCTTAATCTATCGCTGAATATAAACGA 1098293 30 100.0 36 .............................. TTTTAAATCATACAATTGAACCAAACTTCAGAGATG 1098227 30 100.0 35 .............................. CTTCCTAATTTGACTGGTTCTGCTTGTGTTACTTT 1098162 30 100.0 38 .............................. TTCGAGATGATAAAGATTATTTAGCCCAAGAGAAGATA 1098094 30 100.0 36 .............................. GCAGTTACAGAAATATTTAGAAGATGAAACAAATTG 1098028 30 100.0 37 .............................. TTCTTCCTTGGACAATTCATACTGTTTGAATTCTGCA 1097961 30 100.0 38 .............................. ACGATATAACAATTTCTGTAAATGAAACAACCATTAAT 1097893 30 100.0 37 .............................. CTACTATACATACTAAACAGCGAGAAAAGAAACAAAA 1097826 30 100.0 37 .............................. AAGATTATAAAGGACATGTAACAGTTAAAATTGTAGG 1097759 30 100.0 37 .............................. GAGAAGACGGCAATCCTACAGAACATTCAATCCTATA 1097692 30 100.0 37 .............................. TAATGTTAGCTAATTACATAAAAGATAAGATGCAACA 1097625 30 100.0 36 .............................. AGAAATAGCTGGGAATTAAGTCAGGTGTTTAGAAGA 1097559 30 100.0 36 .............................. CAGGCGAAAGCATTAAAAGCGCAATAGCACTGAAAC 1097493 30 100.0 35 .............................. TCTAAATAGGCTACAGGATATTGCAGCAATTAGAG 1097428 30 100.0 37 .............................. AATGTCTTCTATGTCTTCTATATCCTTTCCTATGGTG 1097361 30 100.0 36 .............................. GAATATTCTGTTATCTTCCACGCATAACTTGTAAAA 1097295 30 100.0 38 .............................. CACCCTGGACAGTAGTCAACTTCTTTTTCTAGGGAATC 1097227 30 100.0 36 .............................. TAAGCCAGCTTGGTATCGTAAAATAGGCAAGGAATC 1097161 30 100.0 37 .............................. TTCTTCCTTCCCATTTCCTTCCTGTACCAAGGACATG 1097094 30 100.0 37 .............................. CAGCGTCTGATAGTGCTTTAATAAAGCCAGCAATTGC 1097027 30 100.0 38 .............................. TTCTGTTTGGCTTGTTATAAAATCTTATATACCGACTA 1096959 30 100.0 36 .............................. CCGCTTCCTTGCTCTCCGCAAATGAACCTAACCCCG 1096893 30 100.0 36 .............................. GAAAAAATAGTTGAAAAACTAGAATCAACAGGAATG 1096827 30 100.0 37 .............................. GAGTTCCCAAACCTCTTTGTTCCAAGCTGTAACCAAA 1096760 30 100.0 35 .............................. TTGCTATTGATACGCCTTCCTGTTGCATCTCTTGC 1096695 30 100.0 35 .............................. TATGTTATCTCATTAAAAACCCTGTCCGTCTCAGG 1096630 30 100.0 36 .............................. GACGTCGCTTCAATGCATCCTAGTAGTATCGTTGCA 1096564 30 100.0 36 .............................. AGAAGAAGTGCTGAAAGTCCCGCAGGAAATTTAGTC 1096498 30 100.0 37 .............................. TGAATCATGTGCTTAAAGGAACACCTATTCCTGAAAA 1096431 30 100.0 37 .............................. TTAACATAAAACATAGTACCATCGTATCCTTTCGTGC 1096364 30 100.0 37 .............................. TTATTGTGTTGCAATAACCACTATTAATTCTTTCTTT 1096297 30 100.0 36 .............................. TTGTTATTATCCTCTTTAATGTTACTTGTCACACTG 1096231 30 100.0 36 .............................. AAGCCCCCTTTCTGCAAGCCTGAAAGTATATCCCCA 1096165 30 100.0 36 .............................. TATGTGCCACTGACGGTAACCTCTTTTTTGCCCCAC 1096099 30 100.0 37 .............................. TCAAGGTGGCTTGGCAATTCCGACATCCTCTGTAAAA 1096032 30 100.0 36 .............................. TTCGGTTTCGTTCACCTCCCTTTGCTTAACCGCAAA 1095966 30 100.0 36 .............................. AAAATTTCTTCATATTCACTACCTCCTTTTTTAATT 1095900 30 100.0 38 .............................. ACTGAAACTGCTCCAACAGGACAAAATATTGAAATAGG 1095832 30 100.0 37 .............................. CAACGAATAAAGGTAGATGTTTAGTTAGTGATGAAGC 1095765 30 100.0 38 .............................. TTTCAGAGAATACAAAGATCGATTCAACCTCGATGACG 1095697 30 100.0 38 .............................. GTTAAAAAATCCTTTAACTCGTCAAAAGATTCTTGTCC 1095629 30 100.0 36 .............................. TCTATTTCGTGATCGTTGAAATGTGCGATAAAGTTG 1095563 30 100.0 37 .............................. TATTGATAGAGCCAATTTGATTCAATGTTTCTATGGG 1095496 30 100.0 37 .............................. GATACAGCTACAGCAGGATCAACATATACAGCCACAG 1095429 30 100.0 35 .............................. GGCATCGTGTTCGACCTCACTTTCCTTAAATCTTA 1095364 30 100.0 38 .............................. ATAATAGAAATAATTTTTTCTTTTATAAACACAGATGG 1095296 30 100.0 37 .............................. TTCTTTTGGGAATATTTTTCCCGTATACTATATCTAC 1095229 30 100.0 36 .............................. AAGACGGTCGGTATGTAATAATTAAAGGAACCGACT 1095163 30 100.0 36 .............................. TCATACTTTCCAAATCTATAGAAGGGGCAGACATGC 1095097 30 100.0 37 .............................. GATTCCAACCTTTTTCACAACCCAAACAAATCATACG 1095030 30 100.0 35 .............................. CAGCAATAGTCCTACACTCAACAACTTCATAGCAT 1094965 30 100.0 37 .............................. TCCGGTGGCGTCGTCAATTAAAACTTCTATAGATGTA 1094898 30 100.0 35 .............................. AGCTGTTAGGTAAAACCGCTCTTGCTTCTTCTGGT 1094833 30 100.0 36 .............................. AGCAAAGGTCAAAGGATGTGGTCACCCTTTCAGGTG 1094767 30 100.0 38 .............................. CAATACAGGAATAAAGCAGGAATGGAATACTAGACCAA 1094699 30 100.0 38 .............................. CAATTCGTTGTTTCATATCGTTCACTCCCGTTTATTTA 1094631 30 100.0 36 .............................. TTCTTACTATAGATGGACTAGGCAGCCCTAAAAATG 1094565 30 100.0 35 .............................. TTTTTCTTCCGCCCCCGGCGCGCCCTTTCCGGTCC 1094500 30 100.0 36 .............................. TGGTGCAAATATTCCAAAGCACCACTATTCCTATTA 1094434 30 100.0 37 .............................. TGTTGTCAATATTAATTTTATAATTTTATATCACTTT 1094367 30 100.0 36 .............................. CTATTTTGGCAATCCGCGGTGAGCTTGGTATTGACA 1094301 30 100.0 38 .............................. GCATTTACAATCCCTCCATTAATTATATTTACTATATA 1094233 30 100.0 37 .............................. TTGGAATCCTCCTAGCTCCTTTATTCTCACTAGAACT 1094166 30 100.0 38 .............................. TTCTAAATTGCTATACTCAGTATAATCACAACATATAG 1094098 30 100.0 36 .............................. AGCCTCTAATCAGTCTTTTTTAAAAAACTTGAATTA 1094032 30 100.0 36 .............................. TCCTCTGAATCCGTTTCCTGAATAAACTGGTATATC 1093966 30 100.0 37 .............................. CATAGAATGTTATTGTTTTGTAACTTTTTATTACAAC 1093899 30 100.0 38 .............................. AAAATCCCTTGTATTTTTCCCTCAACTCATATAGCATC 1093831 30 100.0 37 .............................. TTTTGTAGTTGGTATTTTCAATAATGAAAAAGAAGCA 1093764 30 100.0 38 .............................. ATACGGCAATAAACCGCATCAGGCGAAAGTCCATATAT 1093696 30 100.0 40 .............................. CAGATTGAGCAACAACTACTGTTTTTCCTTGTCCTGTATA 1093626 30 100.0 36 .............................. ATGTTTTTTCGGATTCGTCAATATATGGAATAGAAA 1093560 30 100.0 35 .............................. TCATGCTATGTATTGCCCTTGTGGCAATATATATA 1093495 30 100.0 36 .............................. CTATGTTGCTTACGTGTACTATTACTTTTAATGTAT 1093429 30 100.0 37 .............................. GTGCAAGTTCTATTGCTTTATCAAAACTTGTTGTAAC 1093362 30 100.0 39 .............................. GTGATGATGCGGTGGATGCAGGTGTACAATTCACCGACA 1093293 30 100.0 36 .............................. GCTCTACAGCCACTTCCTCTGTAGATACCTCTATTT 1093227 30 100.0 38 .............................. ACTCCTGCAATGTGGCAGGCCTTTCTTAATCTAGGCCA 1093159 30 100.0 36 .............................. TTTGCATCATCAGATCCGCGCCTACCTTGTTTGCGT 1093093 30 100.0 37 .............................. CTGTAAGCAGGATGTAGTAGTTGAAAGGGAAATTCGA 1093026 30 100.0 36 .............................. ATCGCTTCATCGACTAGAGTGTCATAATAAGACCTG 1092960 30 100.0 36 .............................. GTACCTGGATGAATTTCTTTATTGAGATTTCGCTTA 1092894 30 100.0 35 .............................. TCCGCGAACTCGTCCTCCTCGATGGTTACATACAT 1092829 30 100.0 36 .............................. AGCCAGCTCATACGAACAGCTTTTATTCCTTCTCCT 1092763 30 100.0 38 .............................. TTGATTTCTCTTTTAATTATATCGATTTCCCTCTGAAT 1092695 30 100.0 37 .............................. ATATATAAGTTGTTTAAATGACTTTTACTGATACCAT 1092628 30 100.0 38 .............................. TTGAACCGACATAACTATGACCATTCCTGGAGGTCCAT 1092560 30 100.0 36 .............................. CTACCCTAGTAAAAACTTGAGATGTCGCCACTATTT 1092494 30 100.0 37 .............................. GAAAATAAGTACCTGTAAGGAAAATCATTAAACCAGA 1092427 30 100.0 38 .............................. AGCGTAGTTCCGTCATTTTTCTTAAATACATGATACGA 1092359 30 100.0 37 .............................. CCCCGCTATTGTTTACAGTCTCGATAATATTGAGAAC 1092292 30 100.0 38 .............................. TTGGTTTTGCGACACGTCCGAAAACTTGGGACGTGCAA 1092224 30 100.0 37 .............................. AACTTCATGCCTAAGGGTATGATCAACAAAGCTACCG 1092157 30 100.0 37 .............................. TAAGATTGCTTTGAAGTAATTTTACATATTCTCCCTT 1092090 30 100.0 37 .............................. CTGCTTGGGCAAAAAGCAATAAAGTAAATGTTTATAT 1092023 30 100.0 37 .............................. AACAACAATAAAAAGTTAAGGAGGATTGAGGAATGCT 1091956 30 100.0 37 .............................. TCATATTTTAGCTTTAATTCTTTTATCATTTTTTTTA 1091889 30 100.0 37 .............................. CTGCTTGGGCAAAAAGCAATAAAGTAAATGTTTATAT 1091822 30 100.0 39 .............................. AATCTCCACAAACACCGCATCTTTCCCGAAAATATCCGC 1091753 30 100.0 37 .............................. TGCAATTATACCAGACCGACTAATTACCATTATATTA 1091686 30 100.0 37 .............................. TTCCATTCGGTAAGGCTATGAAAGAGTTCTCCCTTTC 1091619 30 100.0 36 .............................. TCCTGTGGTTCAGGAAGGCCTTCGGGTTCAAGGAAA 1091553 30 100.0 35 .............................. TTACATATAAAAATAAAAAGTAAATATAAGGAGGT 1091488 30 100.0 38 .............................. GCCTCCCTTATACGGCCTGTGGTCAGAGACGCAAATGG 1091420 30 100.0 36 .............................. GCAACAGCAGTACGCCCACCGATATTTCCAACCATC 1091354 30 100.0 37 .............................. AGAAAATCCAGGAAGTTCTGGCAACAAAGACAAAAAC 1091287 30 100.0 37 .............................. CCAAACAATAGGTATAATGCATATAGCACTATACTAA 1091220 30 100.0 38 .............................. TCCACTTCTGTTGGTAAAGTCAAATCTATACACTTAAA 1091152 30 100.0 37 .............................. TTCATCGCCTCACCCCTTTGTATTTAATCGTTTTCTA 1091085 30 100.0 38 .............................. AACATACCATTTGAGTGCCAAAAATGGCATCTTAACCG 1091017 30 100.0 37 .............................. TAAGTGAAGCTAACAGAATATTAACTGAGAAAAAACG 1090950 30 100.0 35 .............................. CAACATTCCAACATTAACATTTATTGCTATATCCA 1090885 30 100.0 36 .............................. TAAATATCAGCCAAATCCTCGTAGGTCAACATAATC 1090819 30 100.0 36 .............................. TCCAGAAGACGCCCGCAAGACGAAAATGGCGCCGGA 1090753 30 100.0 35 .............................. AAATTTTTTCGGCACCGGGTTTTAAAAGTGTTGGC 1090688 30 100.0 37 .............................. CCGTAACCCTGAATATCGCTGAGTATGCGTAAACCGT 1090621 30 100.0 36 .............................. TCAGCATTTTTCAAGACATCTGCAGTATGCTCCATG 1090555 30 100.0 36 .............................. ACCAAAGTATCAATTGTAATTCTTAGCCTTGCATAA 1090489 30 100.0 37 .............................. TCTTTAATTATGGAGGTTTTAATATGATAGATTTAAC 1090422 30 100.0 36 .............................. ATGACAGAAACACAGGTGAAAATGTAACGGGATCAA 1090356 30 100.0 37 .............................. ATTTCCCTAATAAGTTTCCTCGCCTCAATAGAACCCA 1090289 30 100.0 36 .............................. GAGTTAAAATCTGATTTTTAATTTGTCTGCCTTTTA 1090223 30 100.0 37 .............................. TGTATACCTCCTTATTTTTTTTTTAAATTCCTTAATT 1090156 30 100.0 36 .............................. GTTTTTGTTGTCTTAGTGATAACTGTTCCGTTAACA 1090090 30 100.0 38 .............................. TTATCTCTGCCAACTCACTTTCGCCTATTTTATATATT 1090022 30 100.0 37 .............................. CCACACTTACACCTCCAACACTGTGTTTCCTATCTGA 1089955 30 100.0 36 .............................. TCCCATACTCTAAATTTAATTTTCATTTAAAAACCC 1089889 30 100.0 36 .............................. ATGAGTTGGCCGAACTGGTACTGCCACTTGTCATGA 1089823 30 100.0 38 .............................. TCAATGCCTGCCCAATGGAGGGCAAGCTTTTCAACATC 1089755 30 100.0 37 .............................. AAAGATTGCCTGGTATTATAAGAGGGAGACAATAGGA 1089688 30 100.0 36 .............................. ATTTTAACATTGGTATTCGTGGTAAGTTTATTAATC 1089622 30 100.0 36 .............................. TTTGTTGCCCAAGCTGTGATTATTTTTATGGCATCT 1089556 30 100.0 38 .............................. TTTCCTACATCGTTCTGAATTATAACACAGGGACGAAT 1089488 30 100.0 37 .............................. GACGCCAATGAATTAAACCAATTTTGGACTTCATCCA 1089421 30 100.0 37 .............................. TTACCTATGATGACGGAACCTTAATTAAACCAAGAGT 1089354 30 100.0 35 .............................. AACCACAAAAACCTCCAACGTTTGCAGCACCTACA 1089289 30 100.0 37 .............................. ATATATAAAAGTGGGGGGAAGTAGCCATATCCCCCCC 1089222 30 100.0 36 .............................. GCCTGCGGGATAATATTTCACCATATAGGGTGATTT 1089156 30 100.0 36 .............................. TTGTTCAGCTAAATTAATCATGTTTTTCCTCCTTCC 1089090 30 100.0 35 .............................. ACCCAAATTGACAAATAGGTTAACAATCGGATAAC 1089025 30 100.0 36 .............................. TTCAATAACTTGCAAGACTACCTCAATATTATATAA 1088959 30 100.0 37 .............................. TGGCGCTGTCTGCCGTAACCGCTCGATAAACACAGCT 1088892 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ======================================== ================== 155 30 100.0 37 GTTTTTACAGTACCTATGAGGAATTGAAAC # Left flank : TGAAAGGAGAAATGCAAAACTTTTAAAAATAGGACGGAAGTACTTGCACTGGGTTCAAAACTCTGTTTTTGAAGGTGAAATAACAGAAGCAAACTATTTCAAGCTTAAGGCTGAAGTTAAGCAAAGAATACATGATACTGAAGACTCTGTTGTCTTTTACACTTTCAGGTCGACCAGATATACAAACCGTGAAATATTAGGCAAAAAAATCGATCCAGGTAATCTTATCCTGTAATAGTTGAATTTTGAATTTATGTTTTCAGCTACTTACATAGATTTTATGTTATAATTTAGATATAAATTTTGAAACAGTTTAAAAAAATCTATTTAAAAAATTGTCGATGTCCGATAGCGTAAAAAACCCGGGAGGTCGACAACTTTTATATTTTTATGTCAAATGCAGTTTCTTTCCGGCTTTGCAGTTTTTTCTCCTGCCTTACTTGACTTATTATATTACATGAGGTTAAAATATGAATGTAGGCATCATGCGGTGCCTACGG # Right flank : CTAGATGTCAGGTAGAAAGAAAACAAATAGACAATATGTTTTTACTGTTGTTGTCAATAATAATTGGTTCTTTCCATAGTTAGTTGAATAACCTCATTTTTTCAAGCTGGAGAATTTTGGTTTTTAATGTCTCAAAACTACAACGGCCATACATAATTCGTTTTATTACCTTTAGTTTATTAATACACCCTTCTACAAGCCCATTACTATATTCATATTTTATCGCATTCCTTACAGCCTCCATATCTCGTTCAACTCCATTCATAAAACTGTTTATTTCCGGTATGTTTAGATTTTTAGCCCGCTCTATCCATTTATCGAAGGCTTCAATATTTTTATTAGTTAGCATATCCTTAAATTCCCATGTTATTTTATATATTTTTTCAAAAAACGGATATTCTTTGCATATCATTTCAAATTGTTTCTCACTGATTATTTTTACTTTTTCTATTGGGTGGTACAATAGCTTAAATATATTTTCTCTTTTTATTATTTCTGTT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTACAGTACCTATGAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: R [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.20,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [71.7-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 2 1131788-1118805 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP025197.1 Acetivibrio saccincola strain GGR1 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================== ================== 1131787 30 100.0 35 .............................. GCACTTCATCAGCTATCTTCTCTTTAGCATAAAAG 1131722 30 100.0 36 .............................. ACGTTCGACGCAATCGGATATGTACCTTCATAAATC 1131656 30 100.0 36 .............................. GATACCTTAGAATTAAAAATAATTTGCAACAAAAAG 1131590 30 100.0 36 .............................. TCCAAATCATAATATGTTACTATGTCGTCACAGTAT 1131524 30 100.0 38 .............................. CCCTAAATATTCGCCTACATACGCGCCAACATTGTCTA 1131456 30 100.0 37 .............................. GTTTATACCGGGTATTTTCTTCCACACCCATTCTAAA 1131389 30 100.0 37 .............................. AATACTGAGTGAACTGAAAGCTACTGTTCCATTGATG 1131322 30 100.0 36 .............................. GCCATTTCGTGCAGTTTTTGTGCTGTAATCCAAGTA 1131256 30 100.0 37 .............................. AATACATCATTTGACGCTCACACAGGGCAAACCCTGT 1131189 30 100.0 35 .............................. AATTAATGATTGGAGTTGATAAAATGACGGACAAA 1131124 30 100.0 37 .............................. GCCCTCCTCAACGACCTTTCCCTGCTATCTGTATCCG 1131057 30 100.0 38 .............................. AGCGTCACGTAGTAAATATAGGCACGAACTGTTTTTAA 1130989 30 100.0 36 .............................. ATATAAAATAATAATCAAAGGAGGTTTTAAAATGTT 1130923 30 100.0 37 .............................. ATATTAAAGAGAGAGTTTTTAAACTCTCTCTATTTTA 1130856 30 100.0 36 .............................. ATATATAGTATACTTATATTATAAGGTACTTTAACA 1130790 30 100.0 37 .............................. TAATATAAGGTATTTTAATTTTAAAGTACCTTAAATA 1130723 30 100.0 38 .............................. ATTAATGTTATGTAATATAAAGAGAGAGTTTTATACTC 1130655 30 100.0 38 .............................. ATGGTACAAGTCACTTGCTTGGCTTTAGTGTCGATTAA 1130587 30 100.0 37 .............................. TTTTTTTTCCTGGCCACTATTCCATTCCTGGCCACTA 1130520 30 100.0 37 .............................. TTCATACCTCTTTTACAAAGTTCTAATTGATAATCAA 1130453 30 100.0 36 .............................. TTCCAATTTCCATTGAATACTTCTACATCGTCCATT 1130387 30 100.0 37 .............................. TAGCTTCTAGTGCCTCTTTTCTCATTTCTTTTTCTTT 1130320 30 100.0 36 .............................. ACTGTCATACCATATCGGCTGGACACGAATTGCAGT 1130254 30 100.0 37 .............................. ATTTCATTTGATTTTCTCTTTCCCATTCATCAGCCAG 1130187 30 100.0 36 .............................. ATAGTCAATTGCGGTTTTCCCGACACTTGAATAGTT 1130121 30 100.0 36 .............................. AGATTTAAATCAGTAAGCATTTTTTTTATATTTTTT 1130055 30 100.0 37 .............................. GATTAGGTCTCGTATTTTTTTGAAAGTCTTCTTCAAA 1129988 30 100.0 37 .............................. AATACTTCGTGGTGCAAGTCAGCATAATATCCACTAT 1129921 30 100.0 37 .............................. AGATTATTTAATCAAAAGTTATTGACTTTAATATTAA 1129854 30 100.0 35 .............................. AAGTACCTTAAATAATTAAATAAGGAGCTGATTTT 1129789 30 100.0 37 .............................. AGTGTCACTTCTGTATTTTTGATAGTACATGTTATTT 1129722 30 100.0 36 .............................. GATATAAAATTCACTAAGTTTTTTGATTTTATAAAG 1129656 30 100.0 37 .............................. CTACGTGGATAAATCGTCAACAGTTCGTGACCTAAAT 1129589 30 100.0 36 .............................. AATCAACGAACGCAGAAAATGCTTTTTCATCGAAGT 1129523 30 100.0 36 .............................. TGGAGCATCTGTAAGATGCATAAACTTCATCAATCA 1129457 30 100.0 36 .............................. ATTCATATCTTAGCGCTGTTTCCATTTAACCACCTA 1129391 30 100.0 38 .............................. ATGTAAATGGAAGCTGAAACCTTGTTGTTACTTTTAAT 1129323 30 100.0 37 .............................. TCCCATGAAGAGTTGGCGTGATTTTTTCAAATATCGT 1129256 30 100.0 36 .............................. ATGTTAAGGGGGAAATTTCCCCCTTAACTTAAAATT 1129190 30 100.0 36 .............................. GCTTCAAAAAATTTTCCGCCTGAGATGATGACAGAA 1129124 30 100.0 36 .............................. ATCACTTGACCGTTAATAATGAGTTTTGGTATGTAC 1129058 30 100.0 36 .............................. TCACACAATTATATATAATATGCCTTATCTTAAAGC 1128992 30 100.0 37 .............................. AAACATATGTTCTATATAAAAGCAAAAAACCTGGCCA 1128925 30 100.0 36 .............................. TCAACTTCTTCTATCCTTTTTGTTTTACAAAAGCCG 1128859 30 100.0 36 .............................. AGGGCGATTTCCCTTATCATGTCGATTTCTAACCCA 1128793 30 100.0 35 .............................. ATACCATATGCGGTATTAATAATTGTAAATATCGC 1128728 30 100.0 36 .............................. ATATATGGTACAATATAATTAAGAGGTTAAGAAAAA 1128662 30 100.0 37 .............................. AGTTTTAAATGGCGAACTGCATGGGACTACAAGGAGG 1128595 30 100.0 37 .............................. TCAAATATAAAGAGTATAAAATAGGCAAATTCAACGA 1128528 30 100.0 37 .............................. ATAAATAATAATTTTGTCGGTGCTGCTAATGAACTTC 1128461 30 100.0 37 .............................. TGTACTTTTTTATCTTTGAAAAAATTTTTAAAACTAT 1128394 30 100.0 37 .............................. TACATTTTAAAGCCCCCTTTTATATGTTTTTATTTCC 1128327 30 100.0 37 .............................. CCCTGCTTTTCTTGTAGGAGGTGTAAAATGGACTTGA 1128260 30 100.0 37 .............................. TCTGCCTCAATAAATCATCTGGAAAATCTCTATAATC 1128193 30 100.0 36 .............................. ATAGATTTACAGCTATCGTATATACTTGCTTTTATG 1128127 30 100.0 37 .............................. TCAGTTACATATGGTGCACCCGCTGCAGTTGTGTTAT 1128060 30 100.0 36 .............................. TGGAAACTTATATTTTGTAAGGAGGAAAGAAAATGA 1127994 30 100.0 37 .............................. GTGTCTCCTGACGGGTGATTATGACAAATTATAATCG 1127927 30 100.0 36 .............................. TTCGGCTGTATAACTTTTGTAAGATGCTACAAGCCG 1127861 30 100.0 37 .............................. AAAGTAATATATTATATATGTAACTAAAAATGAAATA 1127794 30 100.0 38 .............................. TCTTATCCTTCATTCGCTTAGGTATATTTTCTTTTATA 1127726 30 100.0 36 .............................. TTGGAAAATGGAAAACTGTTGATTTGTATCGTGATG 1127660 30 100.0 37 .............................. CCGAACAAATTCACTTCAAAATTTTTATTACCTACAA 1127593 30 100.0 36 .............................. TTGAAAATTCTATAATTGCTGAATTGTGGAACCAAG 1127527 30 100.0 37 .............................. GACTCAGCCAAAACCTCATCCGCCATTTTTTCCTTAG 1127460 30 100.0 36 .............................. TCGTTCCTTCTGGCAACCTACCCCCTACAAGCTGAG 1127394 30 100.0 37 .............................. TAATAAAATCAAATTATTATGGCTTTGAGAATGGCAG 1127327 30 100.0 37 .............................. ACAATAGGAGTCAATTATTAATCTATTTAGTTAATGC 1127260 30 100.0 36 .............................. GCTGCCTCATCAACCTTTCTTATCAAGTCCTCATCC 1127194 30 100.0 36 .............................. TGCTATTTTATAAAAAGCACTTGCAATTAATATTGA 1127128 30 100.0 35 .............................. ATCGTAAAGTCCCTGCGTTTGCAGGCTTCACGATA 1127063 30 100.0 35 .............................. TTCTACAATATAGTTCTTCACCTAATTCACGGAAA 1126998 30 100.0 36 .............................. TTCTGAAAGTTTAGGGCTGCGTTTTCTCTAGTCCGT 1126932 30 100.0 37 .............................. ACACACGTAAAAGAACTAGGTGGATTTATAAGAGTGG 1126865 30 100.0 38 .............................. TGATTTGCTTCGCTGTCGTTTCAATTTCTTTGCCGTTG 1126797 30 100.0 36 .............................. ATGCTCGCCGCCGCTCTGCTAGCCTGTTTTCTAGCC 1126731 30 100.0 37 .............................. AAGCCAACGAATTGAACCAATTCTGGACCTCATCAAT 1126664 30 100.0 36 .............................. AAGCCCTCCGGCAATTCAGTTGCACCTTCCGGCAAC 1126598 30 100.0 36 .............................. GAAAATTAGAACAATATGAAAAGATGCTTAAAAAAT 1126532 30 100.0 37 .............................. ACTACATAATAATAATTATATAGGGAATAAATAATAG 1126465 30 100.0 37 .............................. TAGCCAAAGTTCGTTACTATTATACACTTAGGATATT 1126398 30 100.0 37 .............................. TCGCATAACTGACAGCCTTTTCATAATCCCATATAAC 1126331 30 100.0 37 .............................. GAAATATTTCTAACTTATACTTTAATTGTACACTATT 1126264 30 100.0 36 .............................. TACCATAAGCAGTATGTATTACTGTAAATACGGCTT 1126198 30 100.0 37 .............................. AATGTTACTACCCTTTGACCATTGAACTCTTTGGCTT 1126131 30 100.0 35 .............................. GTCAACCGGATAAACAAAACATGACAGTTCATCGA 1126066 30 100.0 37 .............................. ATAAAAATTACTTTTCATAACTCAAATATTCAAAATG 1125999 30 100.0 35 .............................. GCGTAAAGTGTTAGACTTTACGTATAAATTATTAA 1125934 30 100.0 37 .............................. ATCCGTAAGCTACATTTAAAATTGTGAATATTGCTTG 1125867 30 100.0 36 .............................. CCATATACATGACGTTGCTATAGACCATTATAACCT 1125801 30 100.0 38 .............................. ATGCGAGTCTGGTATGATACAAAACCCATTTTATGTGT 1125733 30 100.0 36 .............................. TATCAATACAACTTTTTACCAACTAGTGACGGCTCA 1125667 30 100.0 37 .............................. ACATAAACAACTTCAATTTCCTTATTATTTGTTGTAA 1125600 30 100.0 36 .............................. ACTGTTCCTGAGCTACCTCTCCGCCCTACAAATCCT 1125534 30 100.0 37 .............................. CAATTTGGACAAAGATTTTCTTCTTTGGGTTGTTCTT 1125467 30 100.0 36 .............................. GAAATGATATTCTTAATCTCCAACAAACCATCAACA 1125401 30 100.0 37 .............................. CTCTTTGGCAGTTTGAGTTTATTTATTCTGTTTTTGA 1125334 30 100.0 37 .............................. GGGGTCTGCCACCCCCAAACCCCTGGCGCAAACCGTT 1125267 30 100.0 34 .............................. ACATAATTACCTTCTTCATCCCTGAATATACTAC 1125203 30 100.0 38 .............................. ATTCGTGTTCACTAATATATGTACAGTTTAGAGTAACT 1125135 30 100.0 36 .............................. TTTAATATTTTTTTTGTAAAAAGGTATTGACTTTAA 1125069 30 100.0 36 .............................. AGTCCATTTTTTCGATGTTTACATGATAAAATTTAA 1125003 30 100.0 37 .............................. TTATATAGCCCTGTAACTTCAGTTCTTTTTCGTCTTC 1124936 30 100.0 37 .............................. GCAGCACGCCCAATTAAACCACCTACTCCGTAAGAAC 1124869 30 100.0 36 .............................. GAATTCTCTAATTTCTATATTTTCAAATTCTTGATT 1124803 30 100.0 35 .............................. AAAGAATATTTATCAGTGTCTGTTTATCAATGAAA 1124738 30 100.0 37 .............................. CGACACGCCCAAAAACTTGGGATGTGCAAAGAAACAA 1124671 30 100.0 37 .............................. TGAGGAAAACAAAATTCACATTCACGACAAGTACAAT 1124604 30 100.0 36 .............................. GGCCACGAGCTAGCATTTTTTTAAGGGAGGATCCGT 1124538 30 100.0 36 .............................. CTAAACAAAAAGGGGTTAATGGTAAAGATGTTTACA 1124472 30 100.0 36 .............................. AATAATCGAATAAGGAGCTGGTAACATGTCAAAAGC 1124406 30 100.0 34 .............................. ATGCAAATATCGGGGTTATAACATTCATAGGCAA 1124342 30 100.0 37 .............................. TCTTAAACATTATATCGCCTCCATACTATTTAATTAA 1124275 30 100.0 36 .............................. AGGGAATATGATGTAAAAGAAAAAATACCGAAAAGA 1124209 30 100.0 38 .............................. GTAAGAAATTTTACAGGTGCTTTTTTGTTCTTGTCTTT 1124141 30 100.0 37 .............................. AATAAAATCTCATAGAGGTGATTTTAATGGCAAACAA 1124074 30 100.0 37 .............................. ATTCTAAGTCGCTAATATATGTACAGTTTAATGTCAC 1124007 30 100.0 36 .............................. ATGGTACTGAAATCAAAACTACAGCTAAGCAAGTGA 1123941 30 100.0 37 .............................. CATCTTGTCGGTTATATTCTTTGAACAGATCCCATTT 1123874 30 100.0 37 .............................. ATGATCTCCAAATGGGAGACTTCCATTCTGTACCATT 1123807 30 100.0 36 .............................. AATAATCGAATAAGGAGATGGTTTTAATGACAAAAA 1123741 30 100.0 38 .............................. ATACATGCTATTTTCCTCCTTTTAAGTCTTCTAGTAAT 1123673 30 100.0 36 .............................. CGGCATATCTTGGAGATGTTGAACTCTCAGAAGAAA 1123607 30 100.0 37 .............................. ACTACTACAGGAAGAGCAATGGGCAATAGTTCCATAA 1123540 30 100.0 37 .............................. TTTCACTCATTTCTAATTTTAATTCATTTTCTACTTC 1123473 30 100.0 37 .............................. AGAAGAATAAATGAAGTAATTTGTTTCGGTGAAAATA 1123406 30 100.0 36 .............................. TATGTCATAGCCATTGAAACATCAGACATAAGAATT 1123340 30 100.0 37 .............................. AACACATTCCAAACCTCCTTAAAATAATTTTTTTTAA 1123273 30 100.0 37 .............................. TCGTATAGAGACGCCTACGACAAGTGATATACATATG 1123206 30 100.0 36 .............................. TATGTCATAGCCATTGAAACATCAGACATAAGAATT 1123140 30 100.0 37 .............................. TATAATTAGCTTTGTTATGTTATAATTTTACAATTCT 1123073 30 100.0 37 .............................. CAATGCTATAACAGATATTTTATAATTTCTGTCATAT 1123006 30 100.0 38 .............................. TCCTTCTTGGGAAAGGTTCTCTTCTTTCTCAACCCATC 1122938 30 100.0 37 .............................. TTGAATTTTCAATGTTCAATGTTCATTTTGTACTTAT 1122871 30 100.0 37 .............................. GATATAGAGAGAATTCAGAAGAAGACAAAAAAGAAGG 1122804 30 100.0 37 .............................. GATATAGAGAGAATTCAGAAGAAGACGAAAAAGAAAG 1122737 30 100.0 37 .............................. ATAAGTCTTCTTTGGTGATATTAACGCTAAATCTCAT 1122670 30 100.0 37 .............................. ACACGGCGGGAATGGGTGAACAGTTTATTTGTGGATA 1122603 30 100.0 37 .............................. ATTATATAGTGAATAAGTGGACATGTTGGAAATATAG 1122536 30 100.0 37 .............................. CTTAGGTAGGTGCTTGTTCTATGCCTAAAAAGGTGGT 1122469 30 100.0 36 .............................. TCTAAAGACCATGGTGCCACATGGGAGCTGATATTT 1122403 30 100.0 37 .............................. AAAAAAGTGTTGACACGGTAACGGTAACGTGTTATAC 1122336 30 100.0 35 .............................. AAGGTACTAGGTAACTATGAACCACTAAAAAGAAA 1122271 30 100.0 37 .............................. AGATAAAAGCAAAAGTAGAGCCTGTAGCTGTTATAAT 1122204 30 100.0 37 .............................. GTGATTTATCAGATTATTTATATCTGATTTTTTTACT 1122137 30 100.0 36 .............................. AACCTCCTTGTTAATTAAATTTTCAATGTTCATTTT 1122071 30 100.0 37 .............................. TGATGTCTCCAACAGCTCAAATAATGATTCACAATGT 1122004 30 100.0 38 .............................. GCTGTGAAAGGTGACAGTTTTGAAATGGATGGATTCCA 1121936 30 100.0 38 .............................. TAAGATTCCTCCTTAAAATAATTTAAAATCTGGCATTT 1121868 30 100.0 37 .............................. GAAAAAATAGTTGAAAAACTAGAATCAACAGGAATGA 1121801 30 100.0 35 .............................. TTTTAAAAGTAAAGGTGAATATATAACACGTTATT 1121736 30 100.0 36 .............................. CAGCAGGATTCACTCCAGCTTGTACTGAAATATCAT 1121670 30 100.0 36 .............................. AACCACCAGCACATACAAAAACTAAATCATCATACG 1121604 30 100.0 38 .............................. GCCGTTCTTAACATTTTTTATCATTCCTTTCATATTTT 1121536 30 100.0 37 .............................. TAAGAATGATAGTTACAAATACGGTAAATCAGTATAT 1121469 30 100.0 36 .............................. TTGGTTTTGCCACCCTACCAAATACTTGAGATGTAC 1121403 30 100.0 36 .............................. TTATAATTGTTTTCTCAAAAGTGGGTTTTGCAGGGC 1121337 30 100.0 38 .............................. AGCATAAAAACTATCCGCCCATTGGCCCAAAACATAGG 1121269 30 100.0 38 .............................. CAAGTGTGTCCATAAAATCCTTTGCGGTTACATCGTGT 1121201 30 100.0 36 .............................. TTATAGCCAAATCATAAAAAACTTCCTGAAAGACTT 1121135 30 100.0 36 .............................. TATTTGAATTTGAGCCAATCTTCTAAGTGTCTGAAC 1121069 30 100.0 36 .............................. GCATAATTGAAAATGCCGGACTTATGGGGGTTCCGA 1121003 30 100.0 36 .............................. TAAATGTCTCTACCCACTTCCCATTTCATTCGGTTT 1120937 30 100.0 37 .............................. TTAAATAAACTTCTAAACGTCGTTGAGGTGAAAGTAC 1120870 30 100.0 37 .............................. TCCTCATGCTTAAAATTGTAGTTCGTTTGAATTTTCA 1120803 30 100.0 36 .............................. AAATCCTACAAAGGGAATGTAACAGTTAAAATTGTA 1120737 30 100.0 38 .............................. TCCGCACGTTTTTTCATGAAACCGTGCGAGGCATTCTG 1120669 30 100.0 37 .............................. ATTGTGACTTAATTTTTTGCATAAAAATATCCGAATT 1120602 30 100.0 37 .............................. ACCTAGGCCAAAACTTTACATTGTTGCCTAATTTAAC 1120535 30 100.0 37 .............................. AAGTTTTTATTTAAAACTAACATTTGATCATAAGTAA 1120468 30 100.0 38 .............................. ATCACTGCGTTGCCCAAAACTCGGGCGTCATCATAAAC 1120400 30 100.0 37 .............................. TATTTTGTCAAGCATTTTTCTCAAATTCTTTGAATTG 1120333 30 100.0 35 .............................. TATTTAGGATCTTCCGCCCAGACCCATTCAACAGG 1120268 30 100.0 36 .............................. CTTGATATTTCTTCATTTTTTAACCTCCTATAACTT 1120202 30 100.0 37 .............................. TACCTCCTATTATATTAGATAAAATACCAGTTTTATT 1120135 30 100.0 40 .............................. GCAATATATTGTATATTTGTTTATTTATGGTATATTAAAG 1120065 30 100.0 36 .............................. CTAAAATTGCACTCTCTACAGTATTCCTAAAACCTA 1119999 30 100.0 37 .............................. ATGTGATTAATTGTACACCACACGATGTAAACCTTGT 1119932 30 100.0 38 .............................. TCTCGAAATTGTTGCCGTTGTATAAACCTGTAAACGGG 1119864 30 100.0 36 .............................. TTGCCTTTGTCGGTAATCATTACGCCGAAACGCTCC 1119798 30 100.0 39 .............................. GACTTCATCGACAAGTACAGATGATGGTTTGTTATAGTC 1119729 30 100.0 37 .............................. AACCTAAATCCTTCAGGTAAGGAGGTAGCTCCTTCTG 1119662 30 100.0 36 .............................. GAAAGTTACTCATGGAAAGAGGATAAGTATGAACCT 1119596 30 100.0 38 .............................. CTGTGTCAGGACATATTTGTATTTCTAGTACGTCACAT 1119528 27 90.0 0 ...........................--- - Deletion [1119502] 1119501 30 100.0 37 .............................. TTAGATTTAATGACCTTAAAAAAATATATATACCTAA 1119434 30 100.0 37 .............................. TGAAAATTGTCATCGATTTTAATCCGACCACAGAAGA 1119367 30 100.0 36 .............................. TGTCGCACACATAATCATTAAATGTTACTTTTATGG 1119301 30 100.0 38 .............................. AACAAAGTCCAACTTATATGCTACATATCGATAAAATA 1119233 30 100.0 37 .............................. CCTGAGGCTTCATTTGAACTTTTGGATAGTATATTTT 1119166 30 96.7 36 .....A........................ AAATGGATTTAAAACATAAAATAGCAATAAGACTAA 1119100 30 100.0 34 .............................. CTTGAATACTTCATACTAACAAACGCTGACATGA 1119036 30 100.0 37 .............................. CTGAAAGAGGTTCGAGAATATTTCGAACCAAAAAAGA 1118969 30 100.0 39 .............................. ATACCAGAAAATAATTCATCTTTACTTATAGGTTCAAAA 1118900 30 100.0 36 .............................. GCTTTTTCAGCTAATTTTTTCTGTTTGGTTTCCAGT 1118834 30 86.7 0 .......................A..TG.T | ========== ====== ====== ====== ============================== ======================================== ================== 196 30 99.9 36 GTTTTTACAGTACCTATGAGGAATTGAAAC # Left flank : CAAATTCTAAAGTTTGAATTCTTTTTTCCAAATCTTCTACGATGCCGTTTATAGTGTTTATTGCTTCATTAAAGACGGTTTTTGTTTCTTCATCCTGTGATTTGACAGAGTATATCCCTAAAGTCCCCTGAATACCTTTTAAATTTGCTAAAGTTTGTTTAACTTGTGAAGCAACAGTCAATTTAATCAACCTCCAATTTTAAGTTTATTATTACACCAATTGTTATTTTTAATCCGTTATAATGTCAGGTAATTTTTCACATATACATTTCTGTTGTATAATAATTAGTGTAAGTGTAAATGTAGTTAAAGCACATAAATATATTTTTGAAAATTTGTCGATGTCCGATAGCGTAAAAAACCCCGGGGGTCGACAACTTTCATTTTTTTGCGTCAAATGCAGTTTCCTTCCGGCTTTGCAGTTTTTTCTCCTGCCTTACTTGACTTTTTATATTACATGAGGTTAAAATATGAATGTAGGCGTCATGCGATGCCTACGG # Right flank : GTGCTTGTTTCTACCCCACCTGGTGAGGTAGATGGATTATACTAAATATCACACAGCAGACATACTGTCCGCCTCTGGACTTTGAAAATTTTTAAAAAAAGTTGAAAAAGTGTGCAAACTTTTTCAACTTTAAAATATCCCTTAAAAATATATACTATGAAATGACAAAAAACCTGGAATAATTATAAAAACATACAATTACAATATTAACAAAGACCTACAATCTGATAAATTCACAAACTGAAAGCATTTTTTCCTTATTTATATTTTCAAGTTCAAAAAACAAATTCATATATTCTACAACTAAATCTTTAAATTCTTCAAATTTTTTCTTATCTATAAATTCATACCCGTGTGCAAAAATACTCTTATTTCTTAAATCCACTTTGTGTTTTAATCTGTTTAGCTGGGCTGTTTTTTTATTCTTTATAATATCATCACCTATAGCTGCAAGAAGTATATATCCTGCCATAAGACTCACCTTCTTGTCTAAATGCTCT # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:-0.00, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTACAGTACCTATGAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: R [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.20,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [56.7-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9.41 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 3 3054530-3054906 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP025197.1 Acetivibrio saccincola strain GGR1 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================== =================================== ================== 3054530 34 100.0 35 .................................. CTGCTTGGACTACTGGGATGGCAGGAATTGGACAA 3054599 34 100.0 34 .................................. TGCATACCTCCATTAGCCCGCTGCAATACCCGAG 3054667 34 100.0 34 .................................. CTTCTGCCAATGGGGAATTACTATTTCCCTTATG 3054735 34 100.0 34 .................................. CTTCTGCCAATGGGGAATTACTATTTCCCTTATG 3054803 34 100.0 35 .................................. CACCTTCCTGCAAAGCAGCTGCAAGCCCTTACCGA 3054872 33 79.4 0 ...................A..TC.-T....GT. | T,A [3054890,3054895] ========== ====== ====== ====== ================================== =================================== ================== 6 34 96.6 35 GTTGAACTTCCCCACGCAGTACGGGAATTGAAAT # Left flank : CGTCCCTAAACTGGTTATATTCTGTTTCCCACAATTCTCTTCCTTTAGTTCTGGCAGCAGGGTGTTCTTTCACACCGCGTTTTTGCATACTGTCTGGTATACGACTTAACTTTTCCTGAACATCGCTGTTGCCGATGTTGAATATGAACAAATTTTTCATATAAAATCAGCCCTTTCGATCTATGATCAACTACATTTATTTTATGTTATCTTCAATATTTGTTCAATATTACAAGATATGCTAATATACGATAGAAAAAATCGGTCAGAATATGTTATAATACTCATGTTATGGATTAACTAAACTATGAACCTTGATAATCAAATAATGAGTGCGGATTACAAGCAAACATGAAAAGTATGGGAGACCCGCACCAGGCATAAAATCAGTGTTTTTGAAATTTTATATAGAAAATGGACGGAGTGCATAATCGGATTATAGTCGATCCGCGAAAACGTGTTCTGAAAGATAGATGAATCGGGCATTACATATGGATGCT # Right flank : TAATGTTGAGTCCATCCGGATAACTGGATAGTATAGGAATTTGCATTTTAGCCTTTGGTCTTAGTAGGTAAAAAATACATGTCAGAGAAATAAAATTGTTGATTGGATTGCAAAATTTGTATAAAATAAAGTGGAATATATGTATAAAAGGTGGGTTATAGTTTTTAAGAATAAAAGTGATAACAGAAGAAGAAAAGAAAGACAAGAATATATTTAAGCAGATAATAGAAGAGAACTGGGAAGACTTCAAAAAGAAGTACCCATCGTATAACAAACCGTATTATGAAGAAGTTATAAAAAAGACATTGCTATGTGGGTCAGAGCAGGGAGGATATACGGAGTATAGATGTATGGAATGCGGACAGGGGATGAGGCGTATACCATTTACCTGTAAAAGTTGTTTTTGTCTTTCGTGTTCAAAAGTTTATACAGATGAAGTAGTAAGCCAAGTTAGTAAGATGCTAAGGTCTGGAATGAAGTACCGACATGTGGTGCTGACA # Questionable array : NO Score: 5.86 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACTTCCCCACGCAGTACGGGAATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:52.94%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-4.80,-6.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [56.7-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.77,0.37 Confidence: HIGH] # Array family : NA //